RNA–Protein interactions for RNA: ENST00000459909.1

TMEM50B-205, Transcript of transmembrane protein 50B, humanhuman

TSL 2

Gene TMEM50B, Length 618 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-205ENST00000459909 SCAPERQ9BY12 1400 aa27.98■■■□□ 2.07
TMEM50B-205ENST00000459909 SOCS7O14512 581 aa27.96■■■□□ 2.07
TMEM50B-205ENST00000459909 ILDR2Q71H61 639 aa27.96■■■□□ 2.07
TMEM50B-205ENST00000459909 DMRT2Q9Y5R5 561 aa27.96■■■□□ 2.07
TMEM50B-205ENST00000459909 ARHGEF12Q9NZN5 1544 aa27.96■■■□□ 2.07
TMEM50B-205ENST00000459909 ATP10AO60312 1499 aa27.95■■■□□ 2.06
TMEM50B-205ENST00000459909 PLCH2O75038 1416 aa27.93■■■□□ 2.06
TMEM50B-205ENST00000459909 C9orf84Q5VXU9 1444 aa27.92■■■□□ 2.06
TMEM50B-205ENST00000459909 PREX1Q8TCU6 1659 aa27.92■■■□□ 2.06
TMEM50B-205ENST00000459909 CEBPAP49715 358 aaPredicted RBP27.89■■■□□ 2.06
TMEM50B-205ENST00000459909 EFCAB2Q5VUJ9 269 aa27.85■■■□□ 2.05
TMEM50B-205ENST00000459909 UHRF1BP1Q6BDS2 1440 aa27.84■■■□□ 2.05
TMEM50B-205ENST00000459909 CDK13Q14004 1512 aaKnown RBP27.84■■■□□ 2.05
TMEM50B-205ENST00000459909 EEA1Q15075 1411 aa27.84■■■□□ 2.05
TMEM50B-205ENST00000459909 STRCQ7RTU9 1775 aa27.81■■■□□ 2.04
TMEM50B-205ENST00000459909 ZNF518AQ6AHZ1 1483 aa27.77■■■□□ 2.04
TMEM50B-205ENST00000459909 PTPRTO14522 1441 aa27.77■■■□□ 2.04
TMEM50B-205ENST00000459909 SPATA31D1Q6ZQQ2 1576 aa27.73■■■□□ 2.03
TMEM50B-205ENST00000459909 AFAP1Q8N556 730 aa27.72■■■□□ 2.03
TMEM50B-205ENST00000459909 CDK11AQ9UQ88 783 aaPredicted RBP27.72■■■□□ 2.03
TMEM50B-205ENST00000459909 MYO5CQ9NQX4 1742 aa27.71■■■□□ 2.03
TMEM50B-205ENST00000459909 SETD1BQ9UPS6 1966 aaKnown RBP27.71■■■□□ 2.03
TMEM50B-205ENST00000459909 KDM5CP41229 1560 aa27.7■■■□□ 2.03
TMEM50B-205ENST00000459909 MYT1LQ9UL68 1186 aa27.69■■■□□ 2.02
TMEM50B-205ENST00000459909 ATP1B4Q9UN42 357 aaPredicted RBP27.68■■■□□ 2.02
TMEM50B-205ENST00000459909 REREQ9P2R6 1566 aa27.67■■■□□ 2.02
TMEM50B-205ENST00000459909 FMN1Q68DA7 1419 aa27.66■■■□□ 2.02
TMEM50B-205ENST00000459909 IQSEC2Q5JU85 1478 aa27.65■■■□□ 2.02
TMEM50B-205ENST00000459909 ESF1Q9H501 851 aaKnown RBP27.65■■■□□ 2.02
TMEM50B-205ENST00000459909 ARHGAP5Q13017 1502 aa27.65■■■□□ 2.02
TMEM50B-205ENST00000459909 DIP2CQ9Y2E4 1556 aa27.65■■■□□ 2.02
TMEM50B-205ENST00000459909 LTBP4Q8N2S1 1624 aa27.63■■■□□ 2.01
TMEM50B-205ENST00000459909 TRAPPC8Q9Y2L5 1435 aa27.63■■■□□ 2.01
TMEM50B-205ENST00000459909 KIF14Q15058 1648 aa27.63■■■□□ 2.01
TMEM50B-205ENST00000459909 MLH3Q9UHC1 1453 aa27.62■■■□□ 2.01
TMEM50B-205ENST00000459909 TROQ12816 1431 aaPredicted RBP27.61■■■□□ 2.01
TMEM50B-205ENST00000459909 C3P01024 1663 aa27.6■■■□□ 2.01
TMEM50B-205ENST00000459909 AGLP35573 1532 aa27.6■■■□□ 2.01
TMEM50B-205ENST00000459909 CLIP1P30622 1438 aa27.58■■■□□ 2.01
TMEM50B-205ENST00000459909 NCOA1Q15788 1441 aa27.58■■■□□ 2
TMEM50B-205ENST00000459909 ABCA6Q8N139 1617 aa27.56■■■□□ 2
TMEM50B-205ENST00000459909 CNTLNQ9NXG0 1405 aa27.55■■■□□ 2
TMEM50B-205ENST00000459909 ARHGAP35Q9NRY4 1499 aa27.51■■□□□ 1.99
TMEM50B-205ENST00000459909 UBTFP17480 764 aaKnown RBP27.48■■□□□ 1.99
TMEM50B-205ENST00000459909 NPATQ14207 1427 aa27.47■■□□□ 1.99
TMEM50B-205ENST00000459909 ABCC1P33527 1531 aa27.46■■□□□ 1.99
TMEM50B-205ENST00000459909 CDC42BPBQ9Y5S2 1711 aa27.45■■□□□ 1.99
TMEM50B-205ENST00000459909 CAMSAP1Q5T5Y3 1602 aa27.45■■□□□ 1.98
TMEM50B-205ENST00000459909 UBAP1LF5GYI3 381 aa27.42■■□□□ 1.98
TMEM50B-205ENST00000459909 PREX2Q70Z35 1606 aa27.41■■□□□ 1.98
TMEM50B-205ENST00000459909 ZMYM3Q14202 1370 aa27.4■■□□□ 1.98
TMEM50B-205ENST00000459909 KIDINS220Q9ULH0 1771 aa27.4■■□□□ 1.98
TMEM50B-205ENST00000459909 ZNF335Q9H4Z2 1342 aaPredicted RBP27.4■■□□□ 1.98
TMEM50B-205ENST00000459909 ITSN2Q9NZM3 1697 aa27.4■■□□□ 1.98
TMEM50B-205ENST00000459909 NCKAP5LQ9HCH0 1330 aa27.39■■□□□ 1.97
TMEM50B-205ENST00000459909 EHMT2Q96KQ7 1210 aa27.38■■□□□ 1.97
TMEM50B-205ENST00000459909 PKD2Q13563 968 aa27.37■■□□□ 1.97
TMEM50B-205ENST00000459909 MROH2AA6NES4 1674 aa27.36■■□□□ 1.97
TMEM50B-205ENST00000459909 PLA2R1Q13018 1463 aa27.34■■□□□ 1.97
TMEM50B-205ENST00000459909 LRRIQ1Q96JM4 1722 aa27.34■■□□□ 1.97
TMEM50B-205ENST00000459909 CCDC18Q5T9S5 1454 aa27.32■■□□□ 1.96
TMEM50B-205ENST00000459909 SAMD9LQ8IVG5 1584 aa27.31■■□□□ 1.96
TMEM50B-205ENST00000459909 TCOF1Q13428 1488 aaKnown RBP27.28■■□□□ 1.96
TMEM50B-205ENST00000459909 SPAG9O60271 1321 aaKnown RBP27.28■■□□□ 1.96
TMEM50B-205ENST00000459909 CASKIN1Q8WXD9 1431 aa27.26■■□□□ 1.95
TMEM50B-205ENST00000459909 ZNF777Q9ULD5 760 aaPredicted RBP27.26■■□□□ 1.95
TMEM50B-205ENST00000459909 ZNF142P52746 1687 aaPredicted RBP27.25■■□□□ 1.95
TMEM50B-205ENST00000459909 PTPRKQ15262 1439 aa27.24■■□□□ 1.95
TMEM50B-205ENST00000459909 MYO3AQ8NEV4 1616 aa27.24■■□□□ 1.95
TMEM50B-205ENST00000459909 CEP170BQ9Y4F5 1589 aaPredicted RBP27.24■■□□□ 1.95
TMEM50B-205ENST00000459909 PPP6R1Q9UPN7 881 aa27.24■■□□□ 1.95
TMEM50B-205ENST00000459909 CDC42BPAQ5VT25 1732 aa27.24■■□□□ 1.95
TMEM50B-205ENST00000459909 SYCP2Q9BX26 1530 aa27.21■■□□□ 1.95
TMEM50B-205ENST00000459909 HNRNPMP52272 730 aaKnown RBP eCLIP27.21■■□□□ 1.95
TMEM50B-205ENST00000459909 SUPT6HQ7KZ85 1726 aaKnown RBP27.2■■□□□ 1.94
TMEM50B-205ENST00000459909 CLTCQ00610 1675 aaKnown RBP27.2■■□□□ 1.94
TMEM50B-205ENST00000459909 PLXNC1O60486 1568 aa27.19■■□□□ 1.94
TMEM50B-205ENST00000459909 A2MP01023 1474 aa27.19■■□□□ 1.94
TMEM50B-205ENST00000459909 ATP7AQ04656 1500 aa27.18■■□□□ 1.94
TMEM50B-205ENST00000459909 KIAA1107Q9UPP5 1409 aa27.17■■□□□ 1.94
TMEM50B-205ENST00000459909 GPATCH8Q9UKJ3 1502 aaKnown RBP27.17■■□□□ 1.94
TMEM50B-205ENST00000459909 GGT6Q6P531 493 aa27.17■■□□□ 1.94
TMEM50B-205ENST00000459909 HSPA1LP34931 641 aa27.16■■□□□ 1.94
TMEM50B-205ENST00000459909 PLEKHH2Q8IVE3 1493 aa27.14■■□□□ 1.94
TMEM50B-205ENST00000459909 SCAF1Q9H7N4 1312 aaKnown RBP27.14■■□□□ 1.93
TMEM50B-205ENST00000459909 TOM1O60784 492 aa27.13■■□□□ 1.93
TMEM50B-205ENST00000459909 MED1Q15648 1581 aaPredicted RBP27.13■■□□□ 1.93
TMEM50B-205ENST00000459909 INO80Q9ULG1 1556 aaPredicted RBP27.13■■□□□ 1.93
TMEM50B-205ENST00000459909 A2ML1A8K2U0 1454 aa27.12■■□□□ 1.93
TMEM50B-205ENST00000459909 PIP4K2BP78356 416 aa27.11■■□□□ 1.93
TMEM50B-205ENST00000459909 CHIC1Q5VXU3 224 aa27.11■■□□□ 1.93
TMEM50B-205ENST00000459909 CFDP1Q9UEE9 299 aaPredicted RBP27.1■■□□□ 1.93
TMEM50B-205ENST00000459909 FYCO1Q9BQS8 1478 aa27.1■■□□□ 1.93
TMEM50B-205ENST00000459909 CPS1P31327 1500 aa27.09■■□□□ 1.93
TMEM50B-205ENST00000459909 DNMT1P26358 1616 aaKnown RBP27.07■■□□□ 1.92
TMEM50B-205ENST00000459909 SHANK2Q9UPX8 1470 aa27.04■■□□□ 1.92
TMEM50B-205ENST00000459909 CCNB3Q8WWL7 1395 aa27.03■■□□□ 1.92
TMEM50B-205ENST00000459909 ADGBQ8N7X0 1667 aa27■■□□□ 1.91
TMEM50B-205ENST00000459909 PHF23Q9BUL5 403 aaPredicted RBP26.99■■□□□ 1.91
TMEM50B-205ENST00000459909 NEURL4Q96JN8 1562 aa26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms