RNA–Protein interactions for RNA: ENST00000458625.5

CCL25-204, Transcript of C-C motif chemokine ligand 25, humanhuman

TSL 5

Gene CCL25, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL25-204ENST00000458625 PREX1Q8TCU6 1659 aa20.53■□□□□ 0.88
CCL25-204ENST00000458625 MAGI2Q86UL8 1455 aa20.52■□□□□ 0.88
CCL25-204ENST00000458625 CEBPAP49715 358 aaPredicted RBP20.52■□□□□ 0.88
CCL25-204ENST00000458625 SPATA31D1Q6ZQQ2 1576 aa20.51■□□□□ 0.87
CCL25-204ENST00000458625 PLEKHD1A6NEE1 506 aa20.5■□□□□ 0.87
CCL25-204ENST00000458625 SCAPERQ9BY12 1400 aa20.46■□□□□ 0.87
CCL25-204ENST00000458625 ATP10AO60312 1499 aa20.44■□□□□ 0.86
CCL25-204ENST00000458625 RANGAP1P46060 587 aaPredicted RBP20.44■□□□□ 0.86
CCL25-204ENST00000458625 C9orf84Q5VXU9 1444 aa20.43■□□□□ 0.86
CCL25-204ENST00000458625 DMRT2Q9Y5R5 561 aa20.41■□□□□ 0.86
CCL25-204ENST00000458625 PLCH2O75038 1416 aa20.41■□□□□ 0.86
CCL25-204ENST00000458625 CDK13Q14004 1512 aaKnown RBP20.4■□□□□ 0.86
CCL25-204ENST00000458625 LTBP4Q8N2S1 1624 aa20.39■□□□□ 0.86
CCL25-204ENST00000458625 UHRF1BP1Q6BDS2 1440 aa20.39■□□□□ 0.85
CCL25-204ENST00000458625 CSRNP3Q8WYN3 585 aa20.38■□□□□ 0.85
CCL25-204ENST00000458625 PTPRTO14522 1441 aa20.37■□□□□ 0.85
CCL25-204ENST00000458625 SETD1BQ9UPS6 1966 aaKnown RBP20.36■□□□□ 0.85
CCL25-204ENST00000458625 C3P01024 1663 aa20.32■□□□□ 0.84
CCL25-204ENST00000458625 KDM5CP41229 1560 aa20.29■□□□□ 0.84
CCL25-204ENST00000458625 DIP2CQ9Y2E4 1556 aa20.29■□□□□ 0.84
CCL25-204ENST00000458625 AFAP1Q8N556 730 aa20.29■□□□□ 0.84
CCL25-204ENST00000458625 MYO5CQ9NQX4 1742 aa20.29■□□□□ 0.84
CCL25-204ENST00000458625 EFCAB2Q5VUJ9 269 aa20.28■□□□□ 0.84
CCL25-204ENST00000458625 IQSEC2Q5JU85 1478 aa20.28■□□□□ 0.84
CCL25-204ENST00000458625 ZNF518AQ6AHZ1 1483 aa20.27■□□□□ 0.84
CCL25-204ENST00000458625 KIF14Q15058 1648 aa20.27■□□□□ 0.83
CCL25-204ENST00000458625 NCOA1Q15788 1441 aa20.27■□□□□ 0.83
CCL25-204ENST00000458625 REREQ9P2R6 1566 aa20.25■□□□□ 0.83
CCL25-204ENST00000458625 ABCA6Q8N139 1617 aa20.25■□□□□ 0.83
CCL25-204ENST00000458625 TRAPPC8Q9Y2L5 1435 aa20.22■□□□□ 0.83
CCL25-204ENST00000458625 ARHGAP5Q13017 1502 aa20.2■□□□□ 0.82
CCL25-204ENST00000458625 AGLP35573 1532 aa20.19■□□□□ 0.82
CCL25-204ENST00000458625 MLH3Q9UHC1 1453 aa20.18■□□□□ 0.82
CCL25-204ENST00000458625 CAMSAP1Q5T5Y3 1602 aa20.17■□□□□ 0.82
CCL25-204ENST00000458625 ZNF335Q9H4Z2 1342 aaPredicted RBP20.17■□□□□ 0.82
CCL25-204ENST00000458625 MYT1LQ9UL68 1186 aa20.16■□□□□ 0.82
CCL25-204ENST00000458625 CDC42BPBQ9Y5S2 1711 aa20.15■□□□□ 0.82
CCL25-204ENST00000458625 TROQ12816 1431 aaPredicted RBP20.14■□□□□ 0.81
CCL25-204ENST00000458625 NCKAP5LQ9HCH0 1330 aa20.14■□□□□ 0.81
CCL25-204ENST00000458625 UBAP1LF5GYI3 381 aa20.14■□□□□ 0.81
CCL25-204ENST00000458625 ATP1B4Q9UN42 357 aaPredicted RBP20.14■□□□□ 0.81
CCL25-204ENST00000458625 EEA1Q15075 1411 aa20.12■□□□□ 0.81
CCL25-204ENST00000458625 KIDINS220Q9ULH0 1771 aa20.11■□□□□ 0.81
CCL25-204ENST00000458625 LRRIQ1Q96JM4 1722 aa20.11■□□□□ 0.81
CCL25-204ENST00000458625 ESF1Q9H501 851 aaKnown RBP20.1■□□□□ 0.81
CCL25-204ENST00000458625 ABCC1P33527 1531 aa20.1■□□□□ 0.81
CCL25-204ENST00000458625 CNTLNQ9NXG0 1405 aa20.1■□□□□ 0.81
CCL25-204ENST00000458625 ITSN2Q9NZM3 1697 aa20.09■□□□□ 0.81
CCL25-204ENST00000458625 NPATQ14207 1427 aa20.09■□□□□ 0.81
CCL25-204ENST00000458625 CDK11AQ9UQ88 783 aaPredicted RBP20.08■□□□□ 0.81
CCL25-204ENST00000458625 FMN1Q68DA7 1419 aa20.08■□□□□ 0.8
CCL25-204ENST00000458625 ARHGAP35Q9NRY4 1499 aa20.07■□□□□ 0.8
CCL25-204ENST00000458625 MROH2AA6NES4 1674 aa20.07■□□□□ 0.8
CCL25-204ENST00000458625 PREX2Q70Z35 1606 aa20.05■□□□□ 0.8
CCL25-204ENST00000458625 ZMYM3Q14202 1370 aa20.05■□□□□ 0.8
CCL25-204ENST00000458625 MED1Q15648 1581 aaPredicted RBP20.04■□□□□ 0.8
CCL25-204ENST00000458625 TCOF1Q13428 1488 aaKnown RBP20.04■□□□□ 0.8
CCL25-204ENST00000458625 CLIP1P30622 1438 aa20.03■□□□□ 0.8
CCL25-204ENST00000458625 ZNF142P52746 1687 aaPredicted RBP20.03■□□□□ 0.8
CCL25-204ENST00000458625 MYO3AQ8NEV4 1616 aa20.02■□□□□ 0.8
CCL25-204ENST00000458625 PLA2R1Q13018 1463 aa20.02■□□□□ 0.8
CCL25-204ENST00000458625 HSPA1LP34931 641 aa20.01■□□□□ 0.79
CCL25-204ENST00000458625 SAMD9LQ8IVG5 1584 aa20■□□□□ 0.79
CCL25-204ENST00000458625 PKD2Q13563 968 aa19.99■□□□□ 0.79
CCL25-204ENST00000458625 EHMT2Q96KQ7 1210 aa19.99■□□□□ 0.79
CCL25-204ENST00000458625 CEP170BQ9Y4F5 1589 aaPredicted RBP19.99■□□□□ 0.79
CCL25-204ENST00000458625 CLTCQ00610 1675 aaKnown RBP19.98■□□□□ 0.79
CCL25-204ENST00000458625 PTPRKQ15262 1439 aa19.98■□□□□ 0.79
CCL25-204ENST00000458625 SUPT6HQ7KZ85 1726 aaKnown RBP19.98■□□□□ 0.79
CCL25-204ENST00000458625 CDC42BPAQ5VT25 1732 aa19.97■□□□□ 0.79
CCL25-204ENST00000458625 PIP4K2BP78356 416 aa19.93■□□□□ 0.78
CCL25-204ENST00000458625 PPP6R1Q9UPN7 881 aa19.93■□□□□ 0.78
CCL25-204ENST00000458625 PLXNC1O60486 1568 aa19.92■□□□□ 0.78
CCL25-204ENST00000458625 SCAF1Q9H7N4 1312 aaKnown RBP19.92■□□□□ 0.78
CCL25-204ENST00000458625 SYCP2Q9BX26 1530 aa19.92■□□□□ 0.78
CCL25-204ENST00000458625 UBTFP17480 764 aaKnown RBP19.91■□□□□ 0.78
CCL25-204ENST00000458625 SPAG9O60271 1321 aaKnown RBP19.89■□□□□ 0.77
CCL25-204ENST00000458625 ALKQ9UM73 1620 aa19.89■□□□□ 0.77
CCL25-204ENST00000458625 DNMT1P26358 1616 aaKnown RBP19.88■□□□□ 0.77
CCL25-204ENST00000458625 NEURL4Q96JN8 1562 aa19.88■□□□□ 0.77
CCL25-204ENST00000458625 ATP7AQ04656 1500 aa19.88■□□□□ 0.77
CCL25-204ENST00000458625 HNRNPMP52272 730 aaKnown RBP eCLIP19.88■□□□□ 0.77
CCL25-204ENST00000458625 INO80Q9ULG1 1556 aaPredicted RBP19.87■□□□□ 0.77
CCL25-204ENST00000458625 ZNF777Q9ULD5 760 aaPredicted RBP19.87■□□□□ 0.77
CCL25-204ENST00000458625 A2ML1A8K2U0 1454 aa19.86■□□□□ 0.77
CCL25-204ENST00000458625 A2MP01023 1474 aa19.86■□□□□ 0.77
CCL25-204ENST00000458625 GGT6Q6P531 493 aa19.85■□□□□ 0.77
CCL25-204ENST00000458625 TOM1O60784 492 aa19.84■□□□□ 0.77
CCL25-204ENST00000458625 CPS1P31327 1500 aa19.84■□□□□ 0.77
CCL25-204ENST00000458625 GPATCH8Q9UKJ3 1502 aaKnown RBP19.84■□□□□ 0.77
CCL25-204ENST00000458625 CCDC18Q5T9S5 1454 aa19.84■□□□□ 0.77
CCL25-204ENST00000458625 SHANK2Q9UPX8 1470 aa19.84■□□□□ 0.77
CCL25-204ENST00000458625 CASKIN1Q8WXD9 1431 aa19.84■□□□□ 0.77
CCL25-204ENST00000458625 POLR1AO95602 1720 aaPredicted RBP19.83■□□□□ 0.77
CCL25-204ENST00000458625 VWDEQ8N2E2 1590 aa19.81■□□□□ 0.76
CCL25-204ENST00000458625 KIAA1107Q9UPP5 1409 aa19.79■□□□□ 0.76
CCL25-204ENST00000458625 PHF23Q9BUL5 403 aaPredicted RBP19.79■□□□□ 0.76
CCL25-204ENST00000458625 FBXO31Q5XUX0 539 aaPredicted RBP19.77■□□□□ 0.76
CCL25-204ENST00000458625 ADGBQ8N7X0 1667 aa19.75■□□□□ 0.75
CCL25-204ENST00000458625 TNRQ92752 1358 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms