RNA–Protein interactions for RNA: ENST00000455711.1

LINC01056-201, Transcript of long intergenic non-protein coding RNA 1056, humanhuman

TSL 1 (best) BASIC

Gene LINC01056, Length 1,234 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01056-201ENST00000455711 STRCQ7RTU9 1775 aa21.82■■□□□ 1.08
LINC01056-201ENST00000455711 DMRT2Q9Y5R5 561 aa21.82■■□□□ 1.08
LINC01056-201ENST00000455711 MAGI2Q86UL8 1455 aa21.82■■□□□ 1.08
LINC01056-201ENST00000455711 ARHGEF12Q9NZN5 1544 aa21.81■■□□□ 1.08
LINC01056-201ENST00000455711 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.8■■□□□ 1.08
LINC01056-201ENST00000455711 PLEKHD1A6NEE1 506 aa21.8■■□□□ 1.08
LINC01056-201ENST00000455711 RANGAP1P46060 587 aaPredicted RBP21.76■■□□□ 1.07
LINC01056-201ENST00000455711 UHRF1BP1Q6BDS2 1440 aa21.76■■□□□ 1.07
LINC01056-201ENST00000455711 SCAPERQ9BY12 1400 aa21.75■■□□□ 1.07
LINC01056-201ENST00000455711 ATP10AO60312 1499 aa21.74■■□□□ 1.07
LINC01056-201ENST00000455711 C9orf84Q5VXU9 1444 aa21.73■■□□□ 1.07
LINC01056-201ENST00000455711 PTPRTO14522 1441 aa21.71■■□□□ 1.07
LINC01056-201ENST00000455711 LTBP4Q8N2S1 1624 aa21.7■■□□□ 1.06
LINC01056-201ENST00000455711 PLCH2O75038 1416 aa21.64■■□□□ 1.06
LINC01056-201ENST00000455711 CDK13Q14004 1512 aaKnown RBP21.64■■□□□ 1.05
LINC01056-201ENST00000455711 SETD1BQ9UPS6 1966 aaKnown RBP21.63■■□□□ 1.05
LINC01056-201ENST00000455711 IQSEC2Q5JU85 1478 aa21.62■■□□□ 1.05
LINC01056-201ENST00000455711 NCOA1Q15788 1441 aa21.58■■□□□ 1.05
LINC01056-201ENST00000455711 EFCAB2Q5VUJ9 269 aa21.58■■□□□ 1.05
LINC01056-201ENST00000455711 AFAP1Q8N556 730 aa21.57■■□□□ 1.04
LINC01056-201ENST00000455711 CSRNP3Q8WYN3 585 aa21.57■■□□□ 1.04
LINC01056-201ENST00000455711 C3P01024 1663 aa21.56■■□□□ 1.04
LINC01056-201ENST00000455711 UBAP1LF5GYI3 381 aa21.56■■□□□ 1.04
LINC01056-201ENST00000455711 MYT1LQ9UL68 1186 aa21.56■■□□□ 1.04
LINC01056-201ENST00000455711 ZNF518AQ6AHZ1 1483 aa21.55■■□□□ 1.04
LINC01056-201ENST00000455711 DIP2CQ9Y2E4 1556 aa21.53■■□□□ 1.04
LINC01056-201ENST00000455711 TRAPPC8Q9Y2L5 1435 aa21.53■■□□□ 1.04
LINC01056-201ENST00000455711 KDM5CP41229 1560 aa21.52■■□□□ 1.04
LINC01056-201ENST00000455711 ZNF335Q9H4Z2 1342 aaPredicted RBP21.52■■□□□ 1.03
LINC01056-201ENST00000455711 ESF1Q9H501 851 aaKnown RBP21.51■■□□□ 1.03
LINC01056-201ENST00000455711 MYO5CQ9NQX4 1742 aa21.5■■□□□ 1.03
LINC01056-201ENST00000455711 ABCA6Q8N139 1617 aa21.48■■□□□ 1.03
LINC01056-201ENST00000455711 CHIC1Q5VXU3 224 aa21.48■■□□□ 1.03
LINC01056-201ENST00000455711 CAMSAP1Q5T5Y3 1602 aa21.47■■□□□ 1.03
LINC01056-201ENST00000455711 ARHGAP5Q13017 1502 aa21.47■■□□□ 1.03
LINC01056-201ENST00000455711 ATP1B4Q9UN42 357 aaPredicted RBP21.47■■□□□ 1.03
LINC01056-201ENST00000455711 REREQ9P2R6 1566 aa21.47■■□□□ 1.03
LINC01056-201ENST00000455711 NCKAP5LQ9HCH0 1330 aa21.47■■□□□ 1.03
LINC01056-201ENST00000455711 KIF14Q15058 1648 aa21.47■■□□□ 1.03
LINC01056-201ENST00000455711 AGLP35573 1532 aa21.42■■□□□ 1.02
LINC01056-201ENST00000455711 MLH3Q9UHC1 1453 aa21.41■■□□□ 1.02
LINC01056-201ENST00000455711 MED1Q15648 1581 aaPredicted RBP21.4■■□□□ 1.02
LINC01056-201ENST00000455711 CNTLNQ9NXG0 1405 aa21.39■■□□□ 1.02
LINC01056-201ENST00000455711 HSPA1LP34931 641 aa21.39■■□□□ 1.01
LINC01056-201ENST00000455711 SCAF1Q9H7N4 1312 aaKnown RBP21.38■■□□□ 1.01
LINC01056-201ENST00000455711 CDK11AQ9UQ88 783 aaPredicted RBP21.36■■□□□ 1.01
LINC01056-201ENST00000455711 TROQ12816 1431 aaPredicted RBP21.36■■□□□ 1.01
LINC01056-201ENST00000455711 NPATQ14207 1427 aa21.36■■□□□ 1.01
LINC01056-201ENST00000455711 PIP4K2BP78356 416 aa21.34■■□□□ 1.01
LINC01056-201ENST00000455711 ZMYM3Q14202 1370 aa21.32■■□□□ 1
LINC01056-201ENST00000455711 ABCC1P33527 1531 aa21.31■■□□□ 1
LINC01056-201ENST00000455711 PKD2Q13563 968 aa21.31■■□□□ 1
LINC01056-201ENST00000455711 TCOF1Q13428 1488 aaKnown RBP21.3■■□□□ 1
LINC01056-201ENST00000455711 CLIP1P30622 1438 aa21.29■■□□□ 1
LINC01056-201ENST00000455711 CDC42BPBQ9Y5S2 1711 aa21.29■■□□□ 1
LINC01056-201ENST00000455711 KIDINS220Q9ULH0 1771 aa21.29■■□□□ 1
LINC01056-201ENST00000455711 PLA2R1Q13018 1463 aa21.29■■□□□ 1
LINC01056-201ENST00000455711 PPP6R1Q9UPN7 881 aa21.29■■□□□ 1
LINC01056-201ENST00000455711 FMN1Q68DA7 1419 aa21.29■■□□□ 1
LINC01056-201ENST00000455711 MROH2AA6NES4 1674 aa21.28■■□□□ 1
LINC01056-201ENST00000455711 MYO3AQ8NEV4 1616 aa21.27■■□□□ 1
LINC01056-201ENST00000455711 PHF23Q9BUL5 403 aaPredicted RBP21.27■■□□□ 1
LINC01056-201ENST00000455711 EEA1Q15075 1411 aa21.27■■□□□ 1
LINC01056-201ENST00000455711 ITSN2Q9NZM3 1697 aa21.27■■□□□ 1
LINC01056-201ENST00000455711 CEP170BQ9Y4F5 1589 aaPredicted RBP21.26■□□□□ 0.99
LINC01056-201ENST00000455711 ZNF142P52746 1687 aaPredicted RBP21.25■□□□□ 0.99
LINC01056-201ENST00000455711 EHMT2Q96KQ7 1210 aa21.25■□□□□ 0.99
LINC01056-201ENST00000455711 PREX2Q70Z35 1606 aa21.24■□□□□ 0.99
LINC01056-201ENST00000455711 PTPRKQ15262 1439 aa21.22■□□□□ 0.99
LINC01056-201ENST00000455711 ARHGAP35Q9NRY4 1499 aa21.22■□□□□ 0.99
LINC01056-201ENST00000455711 TOM1O60784 492 aa21.21■□□□□ 0.99
LINC01056-201ENST00000455711 CLTCQ00610 1675 aaKnown RBP21.21■□□□□ 0.99
LINC01056-201ENST00000455711 SUPT6HQ7KZ85 1726 aaKnown RBP21.21■□□□□ 0.99
LINC01056-201ENST00000455711 SAMD9LQ8IVG5 1584 aa21.19■□□□□ 0.98
LINC01056-201ENST00000455711 LRRIQ1Q96JM4 1722 aa21.18■□□□□ 0.98
LINC01056-201ENST00000455711 SENP3Q9H4L4 574 aaPredicted RBP21.17■□□□□ 0.98
LINC01056-201ENST00000455711 SPAG9O60271 1321 aaKnown RBP21.16■□□□□ 0.98
LINC01056-201ENST00000455711 ZNF777Q9ULD5 760 aaPredicted RBP21.16■□□□□ 0.98
LINC01056-201ENST00000455711 CPS1P31327 1500 aa21.14■□□□□ 0.98
LINC01056-201ENST00000455711 SHANK2Q9UPX8 1470 aa21.14■□□□□ 0.98
LINC01056-201ENST00000455711 UBTFP17480 764 aaKnown RBP21.14■□□□□ 0.97
LINC01056-201ENST00000455711 GGT6Q6P531 493 aa21.14■□□□□ 0.97
LINC01056-201ENST00000455711 SYCP2Q9BX26 1530 aa21.13■□□□□ 0.97
LINC01056-201ENST00000455711 A2ML1A8K2U0 1454 aa21.13■□□□□ 0.97
LINC01056-201ENST00000455711 PLXNC1O60486 1568 aa21.11■□□□□ 0.97
LINC01056-201ENST00000455711 HNRNPMP52272 730 aaKnown RBP eCLIP21.11■□□□□ 0.97
LINC01056-201ENST00000455711 CDC42BPAQ5VT25 1732 aa21.11■□□□□ 0.97
LINC01056-201ENST00000455711 DNMT1P26358 1616 aaKnown RBP21.11■□□□□ 0.97
LINC01056-201ENST00000455711 ALKQ9UM73 1620 aa21.11■□□□□ 0.97
LINC01056-201ENST00000455711 NEURL4Q96JN8 1562 aa21.1■□□□□ 0.97
LINC01056-201ENST00000455711 ATP7AQ04656 1500 aa21.09■□□□□ 0.97
LINC01056-201ENST00000455711 A2MP01023 1474 aa21.09■□□□□ 0.97
LINC01056-201ENST00000455711 POLR1AO95602 1720 aaPredicted RBP21.05■□□□□ 0.96
LINC01056-201ENST00000455711 VWDEQ8N2E2 1590 aa21.05■□□□□ 0.96
LINC01056-201ENST00000455711 INO80Q9ULG1 1556 aaPredicted RBP21.04■□□□□ 0.96
LINC01056-201ENST00000455711 CCDC18Q5T9S5 1454 aa21.03■□□□□ 0.96
LINC01056-201ENST00000455711 FBXO31Q5XUX0 539 aaPredicted RBP21.02■□□□□ 0.96
LINC01056-201ENST00000455711 RGS17Q9UGC6 210 aaPredicted RBP21.02■□□□□ 0.96
LINC01056-201ENST00000455711 TNRQ92752 1358 aa21.01■□□□□ 0.95
LINC01056-201ENST00000455711 GPATCH8Q9UKJ3 1502 aaKnown RBP21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms