RNA–Protein interactions for RNA: ENST00000453166.2

IGKV2D-28-201, Transcript of immunoglobulin kappa variable 2D-28, humanhuman

APPRIS P1

Gene IGKV2D-28, Length 396 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28-201ENST00000453166 IQSEC2Q5JU85 1478 aa19.21■□□□□ 0.67
IGKV2D-28-201ENST00000453166 SAMD9Q5K651 1589 aa19.2■□□□□ 0.66
IGKV2D-28-201ENST00000453166 PTPRTO14522 1441 aa19.2■□□□□ 0.66
IGKV2D-28-201ENST00000453166 UHRF1BP1Q6BDS2 1440 aa19.2■□□□□ 0.66
IGKV2D-28-201ENST00000453166 NUP153P49790 1475 aaKnown RBP19.2■□□□□ 0.66
IGKV2D-28-201ENST00000453166 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.2■□□□□ 0.66
IGKV2D-28-201ENST00000453166 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.19■□□□□ 0.66
IGKV2D-28-201ENST00000453166 HNRNPUL2Q1KMD3 747 aaKnown RBP19.19■□□□□ 0.66
IGKV2D-28-201ENST00000453166 FAM9AQ8IZU1 332 aaPredicted RBP19.16■□□□□ 0.66
IGKV2D-28-201ENST00000453166 PRXQ9BXM0 1461 aa19.16■□□□□ 0.66
IGKV2D-28-201ENST00000453166 C9orf84Q5VXU9 1444 aa19.14■□□□□ 0.65
IGKV2D-28-201ENST00000453166 C3P01024 1663 aa19.14■□□□□ 0.65
IGKV2D-28-201ENST00000453166 ATP10AO60312 1499 aa19.12■□□□□ 0.65
IGKV2D-28-201ENST00000453166 SCAPERQ9BY12 1400 aa19.08■□□□□ 0.65
IGKV2D-28-201ENST00000453166 MED1Q15648 1581 aaPredicted RBP19.06■□□□□ 0.64
IGKV2D-28-201ENST00000453166 NCOA1Q15788 1441 aa19.06■□□□□ 0.64
IGKV2D-28-201ENST00000453166 PLEKHD1A6NEE1 506 aa19.05■□□□□ 0.64
IGKV2D-28-201ENST00000453166 MYO5CQ9NQX4 1742 aa19.01■□□□□ 0.63
IGKV2D-28-201ENST00000453166 DIP2CQ9Y2E4 1556 aa19.01■□□□□ 0.63
IGKV2D-28-201ENST00000453166 UBAP1LF5GYI3 381 aa19■□□□□ 0.63
IGKV2D-28-201ENST00000453166 CAMSAP1Q5T5Y3 1602 aa18.99■□□□□ 0.63
IGKV2D-28-201ENST00000453166 PLCH2O75038 1416 aa18.99■□□□□ 0.63
IGKV2D-28-201ENST00000453166 KDM5CP41229 1560 aa18.98■□□□□ 0.63
IGKV2D-28-201ENST00000453166 REREQ9P2R6 1566 aa18.98■□□□□ 0.63
IGKV2D-28-201ENST00000453166 CDK13Q14004 1512 aaKnown RBP18.97■□□□□ 0.63
IGKV2D-28-201ENST00000453166 ZNF335Q9H4Z2 1342 aaPredicted RBP18.97■□□□□ 0.63
IGKV2D-28-201ENST00000453166 ABCA6Q8N139 1617 aa18.96■□□□□ 0.63
IGKV2D-28-201ENST00000453166 TRAPPC8Q9Y2L5 1435 aa18.95■□□□□ 0.62
IGKV2D-28-201ENST00000453166 ZNF518AQ6AHZ1 1483 aa18.95■□□□□ 0.62
IGKV2D-28-201ENST00000453166 SUPT6HQ7KZ85 1726 aaKnown RBP18.91■□□□□ 0.62
IGKV2D-28-201ENST00000453166 AGLP35573 1532 aa18.9■□□□□ 0.62
IGKV2D-28-201ENST00000453166 RANGAP1P46060 587 aaPredicted RBP18.88■□□□□ 0.61
IGKV2D-28-201ENST00000453166 KIF14Q15058 1648 aa18.88■□□□□ 0.61
IGKV2D-28-201ENST00000453166 ZNF142P52746 1687 aaPredicted RBP18.88■□□□□ 0.61
IGKV2D-28-201ENST00000453166 MROH2AA6NES4 1674 aa18.87■□□□□ 0.61
IGKV2D-28-201ENST00000453166 HSPA1LP34931 641 aa18.87■□□□□ 0.61
IGKV2D-28-201ENST00000453166 NCKAP5LQ9HCH0 1330 aa18.87■□□□□ 0.61
IGKV2D-28-201ENST00000453166 AFAP1Q8N556 730 aa18.86■□□□□ 0.61
IGKV2D-28-201ENST00000453166 EFCAB2Q5VUJ9 269 aa18.85■□□□□ 0.61
IGKV2D-28-201ENST00000453166 MYO3AQ8NEV4 1616 aa18.85■□□□□ 0.61
IGKV2D-28-201ENST00000453166 ESF1Q9H501 851 aaKnown RBP18.84■□□□□ 0.61
IGKV2D-28-201ENST00000453166 ARHGAP5Q13017 1502 aa18.84■□□□□ 0.61
IGKV2D-28-201ENST00000453166 CNTLNQ9NXG0 1405 aa18.83■□□□□ 0.61
IGKV2D-28-201ENST00000453166 SCAF1Q9H7N4 1312 aaKnown RBP18.83■□□□□ 0.61
IGKV2D-28-201ENST00000453166 MYT1LQ9UL68 1186 aa18.83■□□□□ 0.6
IGKV2D-28-201ENST00000453166 NPATQ14207 1427 aa18.83■□□□□ 0.6
IGKV2D-28-201ENST00000453166 PLA2R1Q13018 1463 aa18.82■□□□□ 0.6
IGKV2D-28-201ENST00000453166 MLH3Q9UHC1 1453 aa18.82■□□□□ 0.6
IGKV2D-28-201ENST00000453166 CDC42BPBQ9Y5S2 1711 aa18.81■□□□□ 0.6
IGKV2D-28-201ENST00000453166 TCOF1Q13428 1488 aaKnown RBP18.81■□□□□ 0.6
IGKV2D-28-201ENST00000453166 KIDINS220Q9ULH0 1771 aa18.81■□□□□ 0.6
IGKV2D-28-201ENST00000453166 CEP170BQ9Y4F5 1589 aaPredicted RBP18.8■□□□□ 0.6
IGKV2D-28-201ENST00000453166 ITSN2Q9NZM3 1697 aa18.79■□□□□ 0.6
IGKV2D-28-201ENST00000453166 PIP4K2BP78356 416 aa18.79■□□□□ 0.6
IGKV2D-28-201ENST00000453166 PHF23Q9BUL5 403 aaPredicted RBP18.79■□□□□ 0.6
IGKV2D-28-201ENST00000453166 CLTCQ00610 1675 aaKnown RBP18.76■□□□□ 0.59
IGKV2D-28-201ENST00000453166 ABCC1P33527 1531 aa18.76■□□□□ 0.59
IGKV2D-28-201ENST00000453166 PKD2Q13563 968 aa18.75■□□□□ 0.59
IGKV2D-28-201ENST00000453166 POLR1AO95602 1720 aaPredicted RBP18.74■□□□□ 0.59
IGKV2D-28-201ENST00000453166 PPP6R1Q9UPN7 881 aa18.73■□□□□ 0.59
IGKV2D-28-201ENST00000453166 PREX2Q70Z35 1606 aa18.73■□□□□ 0.59
IGKV2D-28-201ENST00000453166 ALKQ9UM73 1620 aa18.73■□□□□ 0.59
IGKV2D-28-201ENST00000453166 ZMYM3Q14202 1370 aa18.72■□□□□ 0.59
IGKV2D-28-201ENST00000453166 CPS1P31327 1500 aa18.71■□□□□ 0.59
IGKV2D-28-201ENST00000453166 CSRNP3Q8WYN3 585 aa18.71■□□□□ 0.59
IGKV2D-28-201ENST00000453166 LRRIQ1Q96JM4 1722 aa18.71■□□□□ 0.59
IGKV2D-28-201ENST00000453166 TOM1O60784 492 aa18.7■□□□□ 0.58
IGKV2D-28-201ENST00000453166 TROQ12816 1431 aaPredicted RBP18.69■□□□□ 0.58
IGKV2D-28-201ENST00000453166 NEURL4Q96JN8 1562 aa18.68■□□□□ 0.58
IGKV2D-28-201ENST00000453166 PTPRKQ15262 1439 aa18.67■□□□□ 0.58
IGKV2D-28-201ENST00000453166 DNMT1P26358 1616 aaKnown RBP18.67■□□□□ 0.58
IGKV2D-28-201ENST00000453166 SHANK2Q9UPX8 1470 aa18.65■□□□□ 0.58
IGKV2D-28-201ENST00000453166 SAMD9LQ8IVG5 1584 aa18.64■□□□□ 0.58
IGKV2D-28-201ENST00000453166 CDC42BPAQ5VT25 1732 aa18.63■□□□□ 0.57
IGKV2D-28-201ENST00000453166 ATP1B4Q9UN42 357 aaPredicted RBP18.63■□□□□ 0.57
IGKV2D-28-201ENST00000453166 CLIP1P30622 1438 aa18.63■□□□□ 0.57
IGKV2D-28-201ENST00000453166 PLXNC1O60486 1568 aa18.62■□□□□ 0.57
IGKV2D-28-201ENST00000453166 VWDEQ8N2E2 1590 aa18.62■□□□□ 0.57
IGKV2D-28-201ENST00000453166 A2ML1A8K2U0 1454 aa18.61■□□□□ 0.57
IGKV2D-28-201ENST00000453166 CDK11AQ9UQ88 783 aaPredicted RBP18.61■□□□□ 0.57
IGKV2D-28-201ENST00000453166 SENP3Q9H4L4 574 aaPredicted RBP18.6■□□□□ 0.57
IGKV2D-28-201ENST00000453166 RGS17Q9UGC6 210 aaPredicted RBP18.6■□□□□ 0.57
IGKV2D-28-201ENST00000453166 FMN1Q68DA7 1419 aa18.58■□□□□ 0.57
IGKV2D-28-201ENST00000453166 STRCP1A6NGW2 1772 aa18.57■□□□□ 0.56
IGKV2D-28-201ENST00000453166 SYCP2Q9BX26 1530 aa18.56■□□□□ 0.56
IGKV2D-28-201ENST00000453166 INO80Q9ULG1 1556 aaPredicted RBP18.55■□□□□ 0.56
IGKV2D-28-201ENST00000453166 ATP7AQ04656 1500 aa18.55■□□□□ 0.56
IGKV2D-28-201ENST00000453166 SETD1AO15047 1707 aaKnown RBP18.55■□□□□ 0.56
IGKV2D-28-201ENST00000453166 RNF17Q9BXT8 1623 aaKnown RBP18.55■□□□□ 0.56
IGKV2D-28-201ENST00000453166 A2MP01023 1474 aa18.52■□□□□ 0.55
IGKV2D-28-201ENST00000453166 ARHGAP35Q9NRY4 1499 aa18.52■□□□□ 0.55
IGKV2D-28-201ENST00000453166 EEA1Q15075 1411 aa18.51■□□□□ 0.55
IGKV2D-28-201ENST00000453166 SYNMO15061 1565 aa18.5■□□□□ 0.55
IGKV2D-28-201ENST00000453166 GGT6Q6P531 493 aa18.49■□□□□ 0.55
IGKV2D-28-201ENST00000453166 SPAG9O60271 1321 aaKnown RBP18.49■□□□□ 0.55
IGKV2D-28-201ENST00000453166 IQGAP1P46940 1657 aa18.48■□□□□ 0.55
IGKV2D-28-201ENST00000453166 ADGBQ8N7X0 1667 aa18.48■□□□□ 0.55
IGKV2D-28-201ENST00000453166 DEPDC5O75140 1603 aa18.48■□□□□ 0.55
IGKV2D-28-201ENST00000453166 LRRC7Q96NW7 1537 aa18.48■□□□□ 0.55
IGKV2D-28-201ENST00000453166 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms