RNA–Protein interactions for RNA: ENST00000449988.1

PHF20-205, Transcript of PHD finger protein 20, humanhuman

TSL 4

Gene PHF20, Length 539 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF20-205ENST00000449988 GOLGA3Q08378 1498 aa13.16□□□□□ -0.3
PHF20-205ENST00000449988 FHOD3Q2V2M9 1422 aa13.15□□□□□ -0.3
PHF20-205ENST00000449988 ARHGEF12Q9NZN5 1544 aa13.15□□□□□ -0.3
PHF20-205ENST00000449988 MAGI2Q86UL8 1455 aa13.15□□□□□ -0.3
PHF20-205ENST00000449988 MLECQ14165 292 aa13.14□□□□□ -0.31
PHF20-205ENST00000449988 CTTNBP2Q8WZ74 1663 aa13.14□□□□□ -0.31
PHF20-205ENST00000449988 FAM9AQ8IZU1 332 aaPredicted RBP13.13□□□□□ -0.31
PHF20-205ENST00000449988 ATP10BO94823 1461 aa13.1□□□□□ -0.31
PHF20-205ENST00000449988 CEBPAP49715 358 aaPredicted RBP13.09□□□□□ -0.31
PHF20-205ENST00000449988 RAPGEF2Q9Y4G8 1499 aa13.09□□□□□ -0.31
PHF20-205ENST00000449988 NCOA1Q15788 1441 aa13.07□□□□□ -0.32
PHF20-205ENST00000449988 HSPA1LP34931 641 aa13.07□□□□□ -0.32
PHF20-205ENST00000449988 C3P01024 1663 aa13.07□□□□□ -0.32
PHF20-205ENST00000449988 SCAF1Q9H7N4 1312 aaKnown RBP13.06□□□□□ -0.32
PHF20-205ENST00000449988 HECW1Q76N89 1606 aa13.06□□□□□ -0.32
PHF20-205ENST00000449988 ATP10AO60312 1499 aa13.04□□□□□ -0.32
PHF20-205ENST00000449988 C9orf84Q5VXU9 1444 aa13.03□□□□□ -0.32
PHF20-205ENST00000449988 ZNF335Q9H4Z2 1342 aaPredicted RBP13.02□□□□□ -0.33
PHF20-205ENST00000449988 SUPT6HQ7KZ85 1726 aaKnown RBP13.02□□□□□ -0.33
PHF20-205ENST00000449988 ARID3CA6NKF2 412 aa13.01□□□□□ -0.33
PHF20-205ENST00000449988 TOM1O60784 492 aa13.01□□□□□ -0.33
PHF20-205ENST00000449988 CAMSAP1Q5T5Y3 1602 aa13.01□□□□□ -0.33
PHF20-205ENST00000449988 TRAPPC8Q9Y2L5 1435 aa13□□□□□ -0.33
PHF20-205ENST00000449988 PIP4K2BP78356 416 aa12.98□□□□□ -0.33
PHF20-205ENST00000449988 MAPK8IP2Q13387 824 aaPredicted RBP12.98□□□□□ -0.33
PHF20-205ENST00000449988 RAPGEF6Q8TEU7 1601 aa12.96□□□□□ -0.33
PHF20-205ENST00000449988 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.96□□□□□ -0.33
PHF20-205ENST00000449988 HNRNPUL2Q1KMD3 747 aaKnown RBP12.96□□□□□ -0.33
PHF20-205ENST00000449988 ESF1Q9H501 851 aaKnown RBP12.95□□□□□ -0.34
PHF20-205ENST00000449988 PKD2Q13563 968 aa12.94□□□□□ -0.34
PHF20-205ENST00000449988 SCAPERQ9BY12 1400 aa12.92□□□□□ -0.34
PHF20-205ENST00000449988 CPS1P31327 1500 aa12.92□□□□□ -0.34
PHF20-205ENST00000449988 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.92□□□□□ -0.34
PHF20-205ENST00000449988 PLA2R1Q13018 1463 aa12.91□□□□□ -0.34
PHF20-205ENST00000449988 NCKAP5LQ9HCH0 1330 aa12.91□□□□□ -0.34
PHF20-205ENST00000449988 REREQ9P2R6 1566 aa12.91□□□□□ -0.34
PHF20-205ENST00000449988 SUPT5HO00267 1087 aaKnown RBP12.91□□□□□ -0.34
PHF20-205ENST00000449988 ZNF142P52746 1687 aaPredicted RBP12.91□□□□□ -0.34
PHF20-205ENST00000449988 MROH2AA6NES4 1674 aa12.9□□□□□ -0.34
PHF20-205ENST00000449988 NPATQ14207 1427 aa12.9□□□□□ -0.34
PHF20-205ENST00000449988 PTPRKQ15262 1439 aa12.9□□□□□ -0.34
PHF20-205ENST00000449988 AGLP35573 1532 aa12.9□□□□□ -0.34
PHF20-205ENST00000449988 PLEKHD1A6NEE1 506 aa12.9□□□□□ -0.34
PHF20-205ENST00000449988 PPP4R3CPQ6ZMV5 832 aa12.9□□□□□ -0.34
PHF20-205ENST00000449988 CNTLNQ9NXG0 1405 aa12.89□□□□□ -0.35
PHF20-205ENST00000449988 RGS17Q9UGC6 210 aaPredicted RBP12.88□□□□□ -0.35
PHF20-205ENST00000449988 TCOF1Q13428 1488 aaKnown RBP12.87□□□□□ -0.35
PHF20-205ENST00000449988 ZNF518AQ6AHZ1 1483 aa12.85□□□□□ -0.35
PHF20-205ENST00000449988 DIP2CQ9Y2E4 1556 aa12.85□□□□□ -0.35
PHF20-205ENST00000449988 POLR1AO95602 1720 aaPredicted RBP12.85□□□□□ -0.35
PHF20-205ENST00000449988 MYO5CQ9NQX4 1742 aa12.85□□□□□ -0.35
PHF20-205ENST00000449988 NUP153P49790 1475 aaKnown RBP12.85□□□□□ -0.35
PHF20-205ENST00000449988 KDM5CP41229 1560 aa12.84□□□□□ -0.35
PHF20-205ENST00000449988 MYO3AQ8NEV4 1616 aa12.83□□□□□ -0.36
PHF20-205ENST00000449988 SETD1AO15047 1707 aaKnown RBP12.82□□□□□ -0.36
PHF20-205ENST00000449988 CEP170BQ9Y4F5 1589 aaPredicted RBP12.82□□□□□ -0.36
PHF20-205ENST00000449988 PLCH2O75038 1416 aa12.82□□□□□ -0.36
PHF20-205ENST00000449988 P3H3Q8IVL6 736 aa12.82□□□□□ -0.36
PHF20-205ENST00000449988 SAMD9Q5K651 1589 aa12.81□□□□□ -0.36
PHF20-205ENST00000449988 SHANK2Q9UPX8 1470 aa12.81□□□□□ -0.36
PHF20-205ENST00000449988 ALKQ9UM73 1620 aa12.8□□□□□ -0.36
PHF20-205ENST00000449988 MYT1LQ9UL68 1186 aa12.8□□□□□ -0.36
PHF20-205ENST00000449988 ABCA6Q8N139 1617 aa12.8□□□□□ -0.36
PHF20-205ENST00000449988 EFCAB2Q5VUJ9 269 aa12.79□□□□□ -0.36
PHF20-205ENST00000449988 POTEAQ6S8J7 498 aa12.78□□□□□ -0.36
PHF20-205ENST00000449988 ZMYM3Q14202 1370 aa12.76□□□□□ -0.37
PHF20-205ENST00000449988 SRCAPQ6ZRS2 3230 aa12.75□□□□□ -0.37
PHF20-205ENST00000449988 RNF17Q9BXT8 1623 aaKnown RBP12.75□□□□□ -0.37
PHF20-205ENST00000449988 MLH3Q9UHC1 1453 aa12.75□□□□□ -0.37
PHF20-205ENST00000449988 AFAP1Q8N556 730 aa12.73□□□□□ -0.37
PHF20-205ENST00000449988 CLTCQ00610 1675 aaKnown RBP12.73□□□□□ -0.37
PHF20-205ENST00000449988 DNMT1P26358 1616 aaKnown RBP12.72□□□□□ -0.37
PHF20-205ENST00000449988 UPF1Q92900 1129 aaKnown RBP eCLIP12.71□□□□□ -0.37
PHF20-205ENST00000449988 VWDEQ8N2E2 1590 aa12.71□□□□□ -0.37
PHF20-205ENST00000449988 NEURL4Q96JN8 1562 aa12.71□□□□□ -0.37
PHF20-205ENST00000449988 SYNMO15061 1565 aa12.7□□□□□ -0.38
PHF20-205ENST00000449988 A2ML1A8K2U0 1454 aa12.7□□□□□ -0.38
PHF20-205ENST00000449988 PRXQ9BXM0 1461 aa12.7□□□□□ -0.38
PHF20-205ENST00000449988 KIDINS220Q9ULH0 1771 aa12.69□□□□□ -0.38
PHF20-205ENST00000449988 ARHGAP5Q13017 1502 aa12.68□□□□□ -0.38
PHF20-205ENST00000449988 STRCP1A6NGW2 1772 aa12.66□□□□□ -0.38
PHF20-205ENST00000449988 DEPDC5O75140 1603 aa12.65□□□□□ -0.38
PHF20-205ENST00000449988 CDC42BPBQ9Y5S2 1711 aa12.65□□□□□ -0.38
PHF20-205ENST00000449988 ITSN2Q9NZM3 1697 aa12.64□□□□□ -0.39
PHF20-205ENST00000449988 LRRC7Q96NW7 1537 aa12.64□□□□□ -0.39
PHF20-205ENST00000449988 KIF14Q15058 1648 aa12.63□□□□□ -0.39
PHF20-205ENST00000449988 ANKLE2Q86XL3 938 aa12.63□□□□□ -0.39
PHF20-205ENST00000449988 IQGAP1P46940 1657 aa12.63□□□□□ -0.39
PHF20-205ENST00000449988 CDK13Q14004 1512 aaKnown RBP12.62□□□□□ -0.39
PHF20-205ENST00000449988 MED14O60244 1454 aa12.62□□□□□ -0.39
PHF20-205ENST00000449988 CNKSR2Q8WXI2 1034 aa12.62□□□□□ -0.39
PHF20-205ENST00000449988 XIRP1Q702N8 1843 aaKnown RBP12.6□□□□□ -0.39
PHF20-205ENST00000449988 ABCC1P33527 1531 aa12.59□□□□□ -0.39
PHF20-205ENST00000449988 CDK11AQ9UQ88 783 aaPredicted RBP12.59□□□□□ -0.39
PHF20-205ENST00000449988 NPHP4O75161 1426 aaPredicted RBP12.59□□□□□ -0.39
PHF20-205ENST00000449988 FAM135BQ49AJ0 1406 aa12.59□□□□□ -0.39
PHF20-205ENST00000449988 THEMISQ8N1K5 641 aaPredicted RBP12.57□□□□□ -0.4
PHF20-205ENST00000449988 PREX2Q70Z35 1606 aa12.57□□□□□ -0.4
PHF20-205ENST00000449988 PLXNC1O60486 1568 aa12.55□□□□□ -0.4
PHF20-205ENST00000449988 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms