RNA–Protein interactions for RNA: ENST00000449833.6

SHANK2-211, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 8,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-211ENST00000449833 NUDCQ9Y266 331 aa14.58□□□□□ -0.08
SHANK2-211ENST00000449833 CCDC70Q6NSX1 233 aa14.58□□□□□ -0.08
SHANK2-211ENST00000449833 PABPN1Q86U42 306 aaKnown RBP eCLIP14.57□□□□□ -0.08
SHANK2-211ENST00000449833 NPHP1O15259 732 aa14.56□□□□□ -0.08
SHANK2-211ENST00000449833 GZF1Q9H116 711 aaPredicted RBP14.56□□□□□ -0.08
SHANK2-211ENST00000449833 CCDC34Q96HJ3 373 aa14.56□□□□□ -0.08
SHANK2-211ENST00000449833 PPP1R15AO75807 674 aaPredicted RBP14.55□□□□□ -0.08
SHANK2-211ENST00000449833 DDX11L8A8MPP1 907 aa14.55□□□□□ -0.08
SHANK2-211ENST00000449833 KIAA1211Q6ZU35 1233 aa14.55□□□□□ -0.08
SHANK2-211ENST00000449833 CCDC191Q8NCU4 936 aa14.55□□□□□ -0.08
SHANK2-211ENST00000449833 IPO9Q96P70 1041 aaKnown RBP14.54□□□□□ -0.08
SHANK2-211ENST00000449833 TPM2P07951 284 aa14.53□□□□□ -0.08
SHANK2-211ENST00000449833 TSPYL1Q9H0U9 437 aa14.53□□□□□ -0.08
SHANK2-211ENST00000449833 NEUROD2Q15784 382 aa14.52□□□□□ -0.09
SHANK2-211ENST00000449833 HAP1P54257 671 aaPredicted RBP14.51□□□□□ -0.09
SHANK2-211ENST00000449833 GSE1Q14687 1217 aa14.51□□□□□ -0.09
SHANK2-211ENST00000449833 SCRIBQ14160 1630 aa14.51□□□□□ -0.09
SHANK2-211ENST00000449833 HSP90B1P14625 803 aaKnown RBP14.51□□□□□ -0.09
SHANK2-211ENST00000449833 RSF1Q96T23 1441 aaPredicted RBP14.51□□□□□ -0.09
SHANK2-211ENST00000449833 RRP9O43818 475 aaKnown RBP14.51□□□□□ -0.09
SHANK2-211ENST00000449833 ACBD3Q9H3P7 528 aa14.5□□□□□ -0.09
SHANK2-211ENST00000449833 USP8P40818 1118 aa14.5□□□□□ -0.09
SHANK2-211ENST00000449833 PRM3Q9NNZ6 103 aa14.5□□□□□ -0.09
SHANK2-211ENST00000449833 PLEKHG5O94827 1062 aa14.5□□□□□ -0.09
SHANK2-211ENST00000449833 SKOR2Q2VWA4 1001 aaPredicted RBP14.49□□□□□ -0.09
SHANK2-211ENST00000449833 PDE4CQ08493 712 aa14.49□□□□□ -0.09
SHANK2-211ENST00000449833 ABCC9O60706 1549 aa14.48□□□□□ -0.09
SHANK2-211ENST00000449833 TPM3P06753 285 aa14.47□□□□□ -0.09
SHANK2-211ENST00000449833 DCTN1Q14203 1278 aa14.47□□□□□ -0.09
SHANK2-211ENST00000449833 ARGLU1Q9NWB6 273 aaPredicted RBP14.47□□□□□ -0.09
SHANK2-211ENST00000449833 CLIP1P30622 1438 aa14.46□□□□□ -0.09
SHANK2-211ENST00000449833 MEX3CQ5U5Q3 659 aaKnown RBP14.46□□□□□ -0.09
SHANK2-211ENST00000449833 CARD11Q9BXL7 1154 aa14.46□□□□□ -0.09
SHANK2-211ENST00000449833 SENP3-EIF4A1A0A087X0R7 540 aa14.46□□□□□ -0.1
SHANK2-211ENST00000449833 TCERG1O14776 1098 aaKnown RBP14.46□□□□□ -0.1
SHANK2-211ENST00000449833 CDR1P51861 262 aa14.46□□□□□ -0.1
SHANK2-211ENST00000449833 RRP7BPQ9NSQ0 103 aa14.44□□□□□ -0.1
SHANK2-211ENST00000449833 SLKQ9H2G2 1235 aaPredicted RBP14.44□□□□□ -0.1
SHANK2-211ENST00000449833 DEF6Q9H4E7 631 aa14.44□□□□□ -0.1
SHANK2-211ENST00000449833 AK7Q96M32 723 aa14.44□□□□□ -0.1
SHANK2-211ENST00000449833 TIMELESSQ9UNS1 1208 aa14.43□□□□□ -0.1
SHANK2-211ENST00000449833 INCENPQ9NQS7 918 aa14.43□□□□□ -0.1
SHANK2-211ENST00000449833 CEP89Q96ST8 783 aa14.43□□□□□ -0.1
SHANK2-211ENST00000449833 PATL2C9JE40 543 aaKnown RBP14.43□□□□□ -0.1
SHANK2-211ENST00000449833 FAM13BQ9NYF5 915 aa14.43□□□□□ -0.1
SHANK2-211ENST00000449833 PES1O00541 588 aaKnown RBP14.42□□□□□ -0.1
SHANK2-211ENST00000449833 DYDC1Q8WWB3 177 aa14.42□□□□□ -0.1
SHANK2-211ENST00000449833 FAM43AQ8N2R8 423 aa14.42□□□□□ -0.1
SHANK2-211ENST00000449833 IPO8O15397 1037 aaKnown RBP14.41□□□□□ -0.1
SHANK2-211ENST00000449833 ISY1Q9ULR0 285 aaKnown RBP14.41□□□□□ -0.1
SHANK2-211ENST00000449833 RGL3Q3MIN7 710 aa14.4□□□□□ -0.1
SHANK2-211ENST00000449833 KIF16BQ96L93 1317 aa14.4□□□□□ -0.1
SHANK2-211ENST00000449833 H0YHG0 523 aa14.4□□□□□ -0.1
SHANK2-211ENST00000449833 HSP90B2PQ58FF3 399 aa14.4□□□□□ -0.1
SHANK2-211ENST00000449833 CC2D1BQ5T0F9 858 aaKnown RBP14.4□□□□□ -0.1
SHANK2-211ENST00000449833 U2SURPO15042 1029 aaKnown RBP14.39□□□□□ -0.11
SHANK2-211ENST00000449833 GPATCH3Q96I76 525 aa14.39□□□□□ -0.11
SHANK2-211ENST00000449833 TSR1Q2NL82 804 aaKnown RBP14.38□□□□□ -0.11
SHANK2-211ENST00000449833 ZCCHC6Q5VYS8 1495 aaKnown RBP14.38□□□□□ -0.11
SHANK2-211ENST00000449833 DIAPH3Q9NSV4 1193 aa14.38□□□□□ -0.11
SHANK2-211ENST00000449833 NEXNQ0ZGT2 675 aa14.38□□□□□ -0.11
SHANK2-211ENST00000449833 UBE2Q2Q8WVN8 375 aa14.37□□□□□ -0.11
SHANK2-211ENST00000449833 RWDD1Q9H446 243 aaPredicted RBP14.37□□□□□ -0.11
SHANK2-211ENST00000449833 SENP3Q9H4L4 574 aaPredicted RBP14.37□□□□□ -0.11
SHANK2-211ENST00000449833 GOLGA3Q08378 1498 aa14.37□□□□□ -0.11
SHANK2-211ENST00000449833 CCER2I3L3R5 266 aa14.36□□□□□ -0.11
SHANK2-211ENST00000449833 FANCIQ9NVI1 1328 aa14.36□□□□□ -0.11
SHANK2-211ENST00000449833 ZRSR2Q15696 482 aaKnown RBP14.35□□□□□ -0.11
SHANK2-211ENST00000449833 LEKR1Q6ZMV7 388 aa14.35□□□□□ -0.11
SHANK2-211ENST00000449833 CAGE1Q8TC20 777 aa14.35□□□□□ -0.11
SHANK2-211ENST00000449833 PMFBP1Q8TBY8 1022 aa14.35□□□□□ -0.11
SHANK2-211ENST00000449833 HMGN5P82970 282 aaKnown RBP14.34□□□□□ -0.11
SHANK2-211ENST00000449833 RUFY1Q96T51 708 aa14.34□□□□□ -0.11
SHANK2-211ENST00000449833 POGKQ9P215 609 aa14.34□□□□□ -0.11
SHANK2-211ENST00000449833 ST18O60284 1047 aa14.33□□□□□ -0.11
SHANK2-211ENST00000449833 TPM1P09493 284 aa14.33□□□□□ -0.11
SHANK2-211ENST00000449833 GOLGA6L19H0YKK7 550 aa14.33□□□□□ -0.12
SHANK2-211ENST00000449833 KIF3AQ9Y496 699 aa14.33□□□□□ -0.12
SHANK2-211ENST00000449833 RASSF8Q8NHQ8 419 aa14.32□□□□□ -0.12
SHANK2-211ENST00000449833 CCAR2Q8N163 923 aaKnown RBP14.32□□□□□ -0.12
SHANK2-211ENST00000449833 CREBRFQ8IUR6 639 aa14.32□□□□□ -0.12
SHANK2-211ENST00000449833 TAF7LQ5H9L4 462 aa14.32□□□□□ -0.12
SHANK2-211ENST00000449833 GOLGA6L7A0A1B0GV03 622 aa14.32□□□□□ -0.12
SHANK2-211ENST00000449833 TMF1P82094 1093 aa14.31□□□□□ -0.12
SHANK2-211ENST00000449833 ERCC4Q92889 916 aaPredicted RBP14.31□□□□□ -0.12
SHANK2-211ENST00000449833 RTF1Q92541 710 aaKnown RBP14.31□□□□□ -0.12
SHANK2-211ENST00000449833 RCAN3Q9UKA8 241 aa14.3□□□□□ -0.12
SHANK2-211ENST00000449833 CEP162Q5TB80 1403 aa14.3□□□□□ -0.12
SHANK2-211ENST00000449833 TPD52L1Q16890 204 aaPredicted RBP14.3□□□□□ -0.12
SHANK2-211ENST00000449833 TSHZ2Q9NRE2 1034 aa14.3□□□□□ -0.12
SHANK2-211ENST00000449833 MFAP1P55081 439 aaKnown RBP14.29□□□□□ -0.12
SHANK2-211ENST00000449833 KTN1Q86UP2 1357 aaKnown RBP14.29□□□□□ -0.12
SHANK2-211ENST00000449833 ITPRIPQ8IWB1 547 aa14.29□□□□□ -0.12
SHANK2-211ENST00000449833 ATP6V1DQ9Y5K8 247 aa14.29□□□□□ -0.12
SHANK2-211ENST00000449833 HOMEZQ8IX15 550 aa14.28□□□□□ -0.12
SHANK2-211ENST00000449833 EEA1Q15075 1411 aa14.28□□□□□ -0.12
SHANK2-211ENST00000449833 SSR1P43307 286 aaKnown RBP14.28□□□□□ -0.12
SHANK2-211ENST00000449833 TRIM6-TRIM34B2RNG4 842 aa14.27□□□□□ -0.13
SHANK2-211ENST00000449833 APBB1O00213 710 aa14.27□□□□□ -0.13
SHANK2-211ENST00000449833 HSP90AB3PQ58FF7 597 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms