RNA–Protein interactions for RNA: ENST00000448885.5

PCDH15-219, Transcript of protocadherin related 15, humanhuman

TSL 5

Gene PCDH15, Length 6,937 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-219ENST00000448885 RTF1Q92541 710 aaKnown RBP7.83□□□□□ -1.16
PCDH15-219ENST00000448885 TMX4Q9H1E5 349 aaPredicted RBP7.83□□□□□ -1.16
PCDH15-219ENST00000448885 PRM3Q9NNZ6 103 aa7.82□□□□□ -1.16
PCDH15-219ENST00000448885 KIAA1211Q6ZU35 1233 aa7.82□□□□□ -1.16
PCDH15-219ENST00000448885 RTN4Q9NQC3 1192 aaKnown RBP7.82□□□□□ -1.16
PCDH15-219ENST00000448885 GBP4Q96PP9 640 aa7.81□□□□□ -1.16
PCDH15-219ENST00000448885 USP35Q9P2H5 1018 aa7.81□□□□□ -1.16
PCDH15-219ENST00000448885 CEP162Q5TB80 1403 aa7.81□□□□□ -1.16
PCDH15-219ENST00000448885 SYAP1Q96A49 352 aaPredicted RBP7.8□□□□□ -1.16
PCDH15-219ENST00000448885 CALD1Q05682 793 aaKnown RBP7.8□□□□□ -1.16
PCDH15-219ENST00000448885 MORC1Q86VD1 984 aa7.8□□□□□ -1.16
PCDH15-219ENST00000448885 GOLGA6L1Q8N7Z2 621 aa7.8□□□□□ -1.16
PCDH15-219ENST00000448885 IPO8O15397 1037 aaKnown RBP7.8□□□□□ -1.16
PCDH15-219ENST00000448885 A0A0U1RQG5 324 aaPredicted RBP7.8□□□□□ -1.16
PCDH15-219ENST00000448885 SENP3-EIF4A1A0A087X0R7 540 aa7.79□□□□□ -1.16
PCDH15-219ENST00000448885 CCNB3Q8WWL7 1395 aa7.79□□□□□ -1.16
PCDH15-219ENST00000448885 WDR97A6NE52 1622 aa7.79□□□□□ -1.16
PCDH15-219ENST00000448885 GPATCH3Q96I76 525 aa7.79□□□□□ -1.16
PCDH15-219ENST00000448885 SRPK2P78362 688 aaKnown RBP7.79□□□□□ -1.16
PCDH15-219ENST00000448885 CSPP1Q1MSJ5 1256 aa7.79□□□□□ -1.16
PCDH15-219ENST00000448885 HDGFL2Q7Z4V5 671 aaPredicted RBP7.79□□□□□ -1.16
PCDH15-219ENST00000448885 CCDC34Q96HJ3 373 aa7.79□□□□□ -1.16
PCDH15-219ENST00000448885 SPRYD3Q8NCJ5 442 aa7.78□□□□□ -1.16
PCDH15-219ENST00000448885 HSP90B1P14625 803 aaKnown RBP7.78□□□□□ -1.16
PCDH15-219ENST00000448885 KIF27Q86VH2 1401 aa7.78□□□□□ -1.16
PCDH15-219ENST00000448885 ERCC6Q03468 1493 aa7.77□□□□□ -1.17
PCDH15-219ENST00000448885 CEP164Q9UPV0 1460 aa7.77□□□□□ -1.17
PCDH15-219ENST00000448885 KTN1Q86UP2 1357 aaKnown RBP7.77□□□□□ -1.17
PCDH15-219ENST00000448885 CHMP4AQ9BY43 222 aa7.77□□□□□ -1.17
PCDH15-219ENST00000448885 AMER1Q5JTC6 1135 aaPredicted RBP7.76□□□□□ -1.17
PCDH15-219ENST00000448885 RWDD1Q9H446 243 aaPredicted RBP7.76□□□□□ -1.17
PCDH15-219ENST00000448885 CSB-PGBD3P0DP91 1061 aa7.75□□□□□ -1.17
PCDH15-219ENST00000448885 TNNT3P45378 269 aaPredicted RBP7.75□□□□□ -1.17
PCDH15-219ENST00000448885 SOX12O15370 315 aa7.75□□□□□ -1.17
PCDH15-219ENST00000448885 EIF3AQ14152 1382 aaKnown RBP7.74□□□□□ -1.17
PCDH15-219ENST00000448885 ITPRIPQ8IWB1 547 aa7.74□□□□□ -1.17
PCDH15-219ENST00000448885 GORABQ5T7V8 394 aa7.74□□□□□ -1.17
PCDH15-219ENST00000448885 HDAC5Q9UQL6 1122 aa7.74□□□□□ -1.17
PCDH15-219ENST00000448885 DCAF11Q8TEB1 546 aa7.74□□□□□ -1.17
PCDH15-219ENST00000448885 CEP89Q96ST8 783 aa7.74□□□□□ -1.17
PCDH15-219ENST00000448885 G3V3G9 751 aa7.74□□□□□ -1.17
PCDH15-219ENST00000448885 SETQ01105 290 aaPredicted RBP7.74□□□□□ -1.17
PCDH15-219ENST00000448885 DCAF8Q5TAQ9 597 aa7.74□□□□□ -1.17
PCDH15-219ENST00000448885 RASSF8Q8NHQ8 419 aa7.74□□□□□ -1.17
PCDH15-219ENST00000448885 PMFBP1Q8TBY8 1022 aa7.74□□□□□ -1.17
PCDH15-219ENST00000448885 BAZ1BQ9UIG0 1483 aaKnown RBP7.73□□□□□ -1.17
PCDH15-219ENST00000448885 B4GALNT3Q6L9W6 998 aa7.73□□□□□ -1.17
PCDH15-219ENST00000448885 SPAG9O60271 1321 aaKnown RBP7.73□□□□□ -1.17
PCDH15-219ENST00000448885 TAF7LQ5H9L4 462 aa7.73□□□□□ -1.17
PCDH15-219ENST00000448885 WRNQ14191 1432 aaPredicted RBP eCLIP7.73□□□□□ -1.17
PCDH15-219ENST00000448885 APBB1O00213 710 aa7.73□□□□□ -1.17
PCDH15-219ENST00000448885 DEKP35659 375 aaKnown RBP7.73□□□□□ -1.17
PCDH15-219ENST00000448885 FHAD1B1AJZ9 1412 aa7.72□□□□□ -1.17
PCDH15-219ENST00000448885 TPM3P06753 285 aa7.72□□□□□ -1.17
PCDH15-219ENST00000448885 TNIKQ9UKE5 1360 aa7.72□□□□□ -1.17
PCDH15-219ENST00000448885 CCER2I3L3R5 266 aa7.72□□□□□ -1.17
PCDH15-219ENST00000448885 TOP2AP11388 1531 aaKnown RBP7.72□□□□□ -1.17
PCDH15-219ENST00000448885 PHF14O94880 888 aa7.72□□□□□ -1.17
PCDH15-219ENST00000448885 ZNF330Q9Y3S2 320 aaPredicted RBP7.72□□□□□ -1.17
PCDH15-219ENST00000448885 STK31Q9BXU1 1019 aa7.71□□□□□ -1.17
PCDH15-219ENST00000448885 PAK3O75914 559 aaPredicted RBP7.71□□□□□ -1.17
PCDH15-219ENST00000448885 GOLGA6L3A6NEY3 463 aa7.71□□□□□ -1.18
PCDH15-219ENST00000448885 HMMRO75330 724 aa7.71□□□□□ -1.18
PCDH15-219ENST00000448885 CHMP3Q9Y3E7 222 aa7.71□□□□□ -1.18
PCDH15-219ENST00000448885 TPM2P07951 284 aa7.71□□□□□ -1.18
PCDH15-219ENST00000448885 PDE4CQ08493 712 aa7.71□□□□□ -1.18
PCDH15-219ENST00000448885 MLECQ14165 292 aa7.7□□□□□ -1.18
PCDH15-219ENST00000448885 TCERG1O14776 1098 aaKnown RBP7.7□□□□□ -1.18
PCDH15-219ENST00000448885 MARCH6O60337 910 aa7.7□□□□□ -1.18
PCDH15-219ENST00000448885 TRHP20396 242 aaPredicted RBP7.7□□□□□ -1.18
PCDH15-219ENST00000448885 SIN3AQ96ST3 1273 aa7.7□□□□□ -1.18
PCDH15-219ENST00000448885 RALBP1Q15311 655 aa7.7□□□□□ -1.18
PCDH15-219ENST00000448885 VPS53Q5VIR6 699 aa7.7□□□□□ -1.18
PCDH15-219ENST00000448885 ROCK2O75116 1388 aaKnown RBP7.69□□□□□ -1.18
PCDH15-219ENST00000448885 SAFB2Q14151 953 aaKnown RBP eCLIP7.69□□□□□ -1.18
PCDH15-219ENST00000448885 TRIM6-TRIM34B2RNG4 842 aa7.69□□□□□ -1.18
PCDH15-219ENST00000448885 TIMELESSQ9UNS1 1208 aa7.69□□□□□ -1.18
PCDH15-219ENST00000448885 ARHGAP35Q9NRY4 1499 aa7.69□□□□□ -1.18
PCDH15-219ENST00000448885 KIF3AQ9Y496 699 aa7.69□□□□□ -1.18
PCDH15-219ENST00000448885 CCDC9Q9Y3X0 531 aaKnown RBP7.69□□□□□ -1.18
PCDH15-219ENST00000448885 BIVM-ERCC5R4GMW8 1640 aa7.69□□□□□ -1.18
PCDH15-219ENST00000448885 CREBRFQ8IUR6 639 aa7.68□□□□□ -1.18
PCDH15-219ENST00000448885 CHMP4CQ96CF2 233 aa7.68□□□□□ -1.18
PCDH15-219ENST00000448885 MFAP1P55081 439 aaKnown RBP7.68□□□□□ -1.18
PCDH15-219ENST00000448885 STK26Q9P289 416 aa7.68□□□□□ -1.18
PCDH15-219ENST00000448885 LMOD3Q0VAK6 560 aa7.68□□□□□ -1.18
PCDH15-219ENST00000448885 KIF16BQ96L93 1317 aa7.68□□□□□ -1.18
PCDH15-219ENST00000448885 MROH2BQ7Z745 1585 aa7.68□□□□□ -1.18
PCDH15-219ENST00000448885 HSPA5P11021 654 aaKnown RBP7.67□□□□□ -1.18
PCDH15-219ENST00000448885 TPD52L1Q16890 204 aaPredicted RBP7.67□□□□□ -1.18
PCDH15-219ENST00000448885 U2AF1L5P0DN76 240 aaPredicted RBP7.67□□□□□ -1.18
PCDH15-219ENST00000448885 U2AF1Q01081 240 aaKnown RBP eCLIP7.67□□□□□ -1.18
PCDH15-219ENST00000448885 CCDC70Q6NSX1 233 aa7.67□□□□□ -1.18
PCDH15-219ENST00000448885 GZF1Q9H116 711 aaPredicted RBP7.67□□□□□ -1.18
PCDH15-219ENST00000448885 RCAN3Q9UKA8 241 aa7.67□□□□□ -1.18
PCDH15-219ENST00000448885 TSR1Q2NL82 804 aaKnown RBP7.66□□□□□ -1.18
PCDH15-219ENST00000448885 KRI1Q8N9T8 703 aaKnown RBP7.66□□□□□ -1.18
PCDH15-219ENST00000448885 ARID3AQ99856 593 aa7.66□□□□□ -1.18
PCDH15-219ENST00000448885 SETD5Q9C0A6 1442 aa7.66□□□□□ -1.18
PCDH15-219ENST00000448885 ST18O60284 1047 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms