RNA–Protein interactions for RNA: ENST00000448437.6

STRC-204, Transcript of stereocilin, humanhuman

TSL 5

Gene STRC, Length 2,518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-204ENST00000448437 FANCD2Q9BXW9 1451 aa17.18■□□□□ 0.34
STRC-204ENST00000448437 MPHOSPH9Q99550 1183 aa17.17■□□□□ 0.34
STRC-204ENST00000448437 PDS5BQ9NTI5 1447 aa17.16■□□□□ 0.34
STRC-204ENST00000448437 HECW1Q76N89 1606 aa17.16■□□□□ 0.34
STRC-204ENST00000448437 KIF21AQ7Z4S6 1674 aa17.16■□□□□ 0.34
STRC-204ENST00000448437 RAD54L2Q9Y4B4 1467 aa17.15■□□□□ 0.34
STRC-204ENST00000448437 CTTNBP2Q8WZ74 1663 aa17.15■□□□□ 0.34
STRC-204ENST00000448437 SUPT6HQ7KZ85 1726 aaKnown RBP17.15■□□□□ 0.34
STRC-204ENST00000448437 NBPF8Q3BBV2 869 aa17.15■□□□□ 0.34
STRC-204ENST00000448437 NPM2Q86SE8 214 aaKnown RBP17.14■□□□□ 0.33
STRC-204ENST00000448437 PKNOX2Q96KN3 472 aa17.14■□□□□ 0.33
STRC-204ENST00000448437 KDM6BO15054 1643 aa17.14■□□□□ 0.33
STRC-204ENST00000448437 LRRIQ1Q96JM4 1722 aa17.13■□□□□ 0.33
STRC-204ENST00000448437 IL27Q8NEV9 243 aa17.13■□□□□ 0.33
STRC-204ENST00000448437 SALL2Q9Y467 1007 aaPredicted RBP17.13■□□□□ 0.33
STRC-204ENST00000448437 POLR3GLQ9BT43 218 aa17.13■□□□□ 0.33
STRC-204ENST00000448437 RTN4Q9NQC3 1192 aaKnown RBP17.12■□□□□ 0.33
STRC-204ENST00000448437 RNF123Q5XPI4 1314 aa17.11■□□□□ 0.33
STRC-204ENST00000448437 GCC2Q8IWJ2 1684 aa17.11■□□□□ 0.33
STRC-204ENST00000448437 EHBP1L1Q8N3D4 1523 aa17.11■□□□□ 0.33
STRC-204ENST00000448437 UGGT2Q9NYU1 1516 aa17.09■□□□□ 0.33
STRC-204ENST00000448437 GRIN2BQ13224 1484 aa17.08■□□□□ 0.33
STRC-204ENST00000448437 LAS1LQ9Y4W2 734 aaKnown RBP17.08■□□□□ 0.32
STRC-204ENST00000448437 THOC2Q8NI27 1593 aaKnown RBP17.07■□□□□ 0.32
STRC-204ENST00000448437 CUL7Q14999 1698 aa17.07■□□□□ 0.32
STRC-204ENST00000448437 ABCA10Q8WWZ4 1543 aa17.07■□□□□ 0.32
STRC-204ENST00000448437 SPATA31E1Q6ZUB1 1445 aa17.06■□□□□ 0.32
STRC-204ENST00000448437 NEFMP07197 916 aa17.05■□□□□ 0.32
STRC-204ENST00000448437 ABCA5Q8WWZ7 1642 aa17.05■□□□□ 0.32
STRC-204ENST00000448437 MAGI3Q5TCQ9 1506 aa17.04■□□□□ 0.32
STRC-204ENST00000448437 RPRD2Q5VT52 1461 aaKnown RBP17.04■□□□□ 0.32
STRC-204ENST00000448437 DHX29Q7Z478 1369 aaKnown RBP17.04■□□□□ 0.32
STRC-204ENST00000448437 POLA1P09884 1462 aaPredicted RBP17.03■□□□□ 0.32
STRC-204ENST00000448437 TCOF1Q13428 1488 aaKnown RBP17.03■□□□□ 0.32
STRC-204ENST00000448437 TEX14Q8IWB6 1497 aa17.03■□□□□ 0.32
STRC-204ENST00000448437 SAMD9Q5K651 1589 aa17.03■□□□□ 0.32
STRC-204ENST00000448437 ANKRD30BQ9BXX2 1392 aa17.02■□□□□ 0.32
STRC-204ENST00000448437 POLR1AO95602 1720 aaPredicted RBP17.02■□□□□ 0.32
STRC-204ENST00000448437 ARHGEF11O15085 1522 aa17.02■□□□□ 0.32
STRC-204ENST00000448437 TMC1Q8TDI8 760 aa17.01■□□□□ 0.31
STRC-204ENST00000448437 ZNF326Q5BKZ1 582 aaKnown RBP17■□□□□ 0.31
STRC-204ENST00000448437 MRC2Q9UBG0 1479 aa17■□□□□ 0.31
STRC-204ENST00000448437 DNMBPQ6XZF7 1577 aa16.99■□□□□ 0.31
STRC-204ENST00000448437 SLC4A1APQ9BWU0 796 aaKnown RBP16.99■□□□□ 0.31
STRC-204ENST00000448437 EXOC6Q8TAG9 804 aa16.99■□□□□ 0.31
STRC-204ENST00000448437 PNISRQ8TF01 805 aaKnown RBP16.99■□□□□ 0.31
STRC-204ENST00000448437 URB2Q14146 1524 aaKnown RBP16.98■□□□□ 0.31
STRC-204ENST00000448437 ARID3CA6NKF2 412 aa16.98■□□□□ 0.31
STRC-204ENST00000448437 TCERG1O14776 1098 aaKnown RBP16.98■□□□□ 0.31
STRC-204ENST00000448437 PDE4AP27815 886 aa16.98■□□□□ 0.31
STRC-204ENST00000448437 TOPBP1Q92547 1522 aa16.97■□□□□ 0.31
STRC-204ENST00000448437 RRP1P56182 461 aaKnown RBP16.97■□□□□ 0.31
STRC-204ENST00000448437 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.96■□□□□ 0.31
STRC-204ENST00000448437 USP35Q9P2H5 1018 aa16.96■□□□□ 0.3
STRC-204ENST00000448437 MIA2Q96PC5 1412 aa16.96■□□□□ 0.3
STRC-204ENST00000448437 USP47Q96K76 1375 aa16.95■□□□□ 0.3
STRC-204ENST00000448437 WDR62O43379 1518 aa16.93■□□□□ 0.3
STRC-204ENST00000448437 BACH2Q9BYV9 841 aa16.93■□□□□ 0.3
STRC-204ENST00000448437 BCORL1Q5H9F3 1711 aa16.92■□□□□ 0.3
STRC-204ENST00000448437 TDRD9Q8NDG6 1382 aaKnown RBP16.91■□□□□ 0.3
STRC-204ENST00000448437 PPM1GO15355 546 aaPredicted RBP16.91■□□□□ 0.3
STRC-204ENST00000448437 RCAN3Q9UKA8 241 aa16.91■□□□□ 0.3
STRC-204ENST00000448437 AEBP2Q6ZN18 517 aaPredicted RBP16.9■□□□□ 0.3
STRC-204ENST00000448437 KLHL34Q8N239 644 aa16.89■□□□□ 0.29
STRC-204ENST00000448437 CDK13Q14004 1512 aaKnown RBP16.89■□□□□ 0.29
STRC-204ENST00000448437 DAPK1P53355 1430 aa16.88■□□□□ 0.29
STRC-204ENST00000448437 WASHC2CQ9Y4E1 1318 aa16.88■□□□□ 0.29
STRC-204ENST00000448437 EPRSP07814 1512 aaKnown RBP16.87■□□□□ 0.29
STRC-204ENST00000448437 MS4A1P11836 297 aa16.87■□□□□ 0.29
STRC-204ENST00000448437 NCBP3Q53F19 620 aaKnown RBP16.87■□□□□ 0.29
STRC-204ENST00000448437 ROCK1Q13464 1354 aa16.86■□□□□ 0.29
STRC-204ENST00000448437 LRPPRCP42704 1394 aaKnown RBP16.86■□□□□ 0.29
STRC-204ENST00000448437 BRPF3Q9ULD4 1205 aa16.86■□□□□ 0.29
STRC-204ENST00000448437 KIF15Q9NS87 1388 aa16.85■□□□□ 0.29
STRC-204ENST00000448437 ZNF644Q9H582 1327 aaPredicted RBP16.85■□□□□ 0.29
STRC-204ENST00000448437 SKAP1Q86WV1 359 aa16.85■□□□□ 0.29
STRC-204ENST00000448437 ARID4BQ4LE39 1312 aaPredicted RBP16.85■□□□□ 0.29
STRC-204ENST00000448437 ABCC5O15440 1437 aa16.84■□□□□ 0.29
STRC-204ENST00000448437 MYBBP1AQ9BQG0 1328 aaKnown RBP16.84■□□□□ 0.29
STRC-204ENST00000448437 ROCK2O75116 1388 aaKnown RBP16.83■□□□□ 0.29
STRC-204ENST00000448437 MBD5Q9P267 1494 aa16.83■□□□□ 0.28
STRC-204ENST00000448437 GAPVD1Q14C86 1478 aa16.83■□□□□ 0.28
STRC-204ENST00000448437 KDM5CP41229 1560 aa16.83■□□□□ 0.28
STRC-204ENST00000448437 BRD4O60885 1362 aaPredicted RBP16.82■□□□□ 0.28
STRC-204ENST00000448437 DDRGK1Q96HY6 314 aa16.82■□□□□ 0.28
STRC-204ENST00000448437 PLIN1O60240 522 aa16.81■□□□□ 0.28
STRC-204ENST00000448437 GSE1Q14687 1217 aa16.81■□□□□ 0.28
STRC-204ENST00000448437 CARD11Q9BXL7 1154 aa16.8■□□□□ 0.28
STRC-204ENST00000448437 PZPP20742 1482 aa16.8■□□□□ 0.28
STRC-204ENST00000448437 KIF14Q15058 1648 aa16.8■□□□□ 0.28
STRC-204ENST00000448437 SLC4A3P48751 1232 aa16.79■□□□□ 0.28
STRC-204ENST00000448437 DNMT1P26358 1616 aaKnown RBP16.79■□□□□ 0.28
STRC-204ENST00000448437 RALBP1Q15311 655 aa16.79■□□□□ 0.28
STRC-204ENST00000448437 CDCA7LQ96GN5 454 aa16.79■□□□□ 0.28
STRC-204ENST00000448437 NFKBIBQ15653 356 aa16.78■□□□□ 0.28
STRC-204ENST00000448437 PKD2Q13563 968 aa16.77■□□□□ 0.28
STRC-204ENST00000448437 ST20-MTHFSA0A0A6YYL1 179 aa16.76■□□□□ 0.27
STRC-204ENST00000448437 KIAA1107Q9UPP5 1409 aa16.76■□□□□ 0.27
STRC-204ENST00000448437 CRBNQ96SW2 442 aa16.76■□□□□ 0.27
STRC-204ENST00000448437 PDE3BQ13370 1112 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms