RNA–Protein interactions for RNA: ENST00000447515.5

GGA1-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 4

Gene GGA1, Length 577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-213ENST00000447515 DISP3Q9P2K9 1392 aa25.04■■□□□ 1.6
GGA1-213ENST00000447515 CEBPAP49715 358 aaPredicted RBP25.03■■□□□ 1.6
GGA1-213ENST00000447515 PREX1Q8TCU6 1659 aa25.02■■□□□ 1.6
GGA1-213ENST00000447515 SCAPERQ9BY12 1400 aa25.02■■□□□ 1.6
GGA1-213ENST00000447515 STRCQ7RTU9 1775 aa25.01■■□□□ 1.59
GGA1-213ENST00000447515 ARHGEF12Q9NZN5 1544 aa25.01■■□□□ 1.59
GGA1-213ENST00000447515 CDK13Q14004 1512 aaKnown RBP25■■□□□ 1.59
GGA1-213ENST00000447515 ATP10AO60312 1499 aa24.96■■□□□ 1.59
GGA1-213ENST00000447515 SOCS7O14512 581 aa24.95■■□□□ 1.58
GGA1-213ENST00000447515 CHIC1Q5VXU3 224 aa24.95■■□□□ 1.58
GGA1-213ENST00000447515 PLCH2O75038 1416 aa24.95■■□□□ 1.58
GGA1-213ENST00000447515 C9orf84Q5VXU9 1444 aa24.93■■□□□ 1.58
GGA1-213ENST00000447515 MYO5CQ9NQX4 1742 aa24.88■■□□□ 1.57
GGA1-213ENST00000447515 SETD1BQ9UPS6 1966 aaKnown RBP24.87■■□□□ 1.57
GGA1-213ENST00000447515 DMRT2Q9Y5R5 561 aa24.85■■□□□ 1.57
GGA1-213ENST00000447515 EFCAB2Q5VUJ9 269 aa24.84■■□□□ 1.57
GGA1-213ENST00000447515 UHRF1BP1Q6BDS2 1440 aa24.84■■□□□ 1.57
GGA1-213ENST00000447515 SPATA31D1Q6ZQQ2 1576 aa24.83■■□□□ 1.57
GGA1-213ENST00000447515 KIF14Q15058 1648 aa24.83■■□□□ 1.56
GGA1-213ENST00000447515 AFAP1Q8N556 730 aa24.82■■□□□ 1.56
GGA1-213ENST00000447515 ATP1B4Q9UN42 357 aaPredicted RBP24.81■■□□□ 1.56
GGA1-213ENST00000447515 C3P01024 1663 aa24.79■■□□□ 1.56
GGA1-213ENST00000447515 DIP2CQ9Y2E4 1556 aa24.78■■□□□ 1.56
GGA1-213ENST00000447515 EEA1Q15075 1411 aa24.78■■□□□ 1.56
GGA1-213ENST00000447515 ZNF518AQ6AHZ1 1483 aa24.77■■□□□ 1.56
GGA1-213ENST00000447515 KDM5CP41229 1560 aa24.77■■□□□ 1.56
GGA1-213ENST00000447515 MYT1LQ9UL68 1186 aa24.76■■□□□ 1.55
GGA1-213ENST00000447515 PTPRTO14522 1441 aa24.76■■□□□ 1.55
GGA1-213ENST00000447515 LTBP4Q8N2S1 1624 aa24.75■■□□□ 1.55
GGA1-213ENST00000447515 ARHGAP5Q13017 1502 aa24.74■■□□□ 1.55
GGA1-213ENST00000447515 ABCA6Q8N139 1617 aa24.74■■□□□ 1.55
GGA1-213ENST00000447515 EHMT2Q96KQ7 1210 aa24.73■■□□□ 1.55
GGA1-213ENST00000447515 CDC42BPBQ9Y5S2 1711 aa24.69■■□□□ 1.54
GGA1-213ENST00000447515 REREQ9P2R6 1566 aa24.69■■□□□ 1.54
GGA1-213ENST00000447515 LRRIQ1Q96JM4 1722 aa24.69■■□□□ 1.54
GGA1-213ENST00000447515 TROQ12816 1431 aaPredicted RBP24.67■■□□□ 1.54
GGA1-213ENST00000447515 CDK11AQ9UQ88 783 aaPredicted RBP24.66■■□□□ 1.54
GGA1-213ENST00000447515 FMN1Q68DA7 1419 aa24.65■■□□□ 1.54
GGA1-213ENST00000447515 TRAPPC8Q9Y2L5 1435 aa24.65■■□□□ 1.54
GGA1-213ENST00000447515 MLH3Q9UHC1 1453 aa24.64■■□□□ 1.54
GGA1-213ENST00000447515 NCOA1Q15788 1441 aa24.64■■□□□ 1.54
GGA1-213ENST00000447515 ARHGAP35Q9NRY4 1499 aa24.64■■□□□ 1.53
GGA1-213ENST00000447515 AGLP35573 1532 aa24.62■■□□□ 1.53
GGA1-213ENST00000447515 ESF1Q9H501 851 aaKnown RBP24.62■■□□□ 1.53
GGA1-213ENST00000447515 IQSEC2Q5JU85 1478 aa24.6■■□□□ 1.53
GGA1-213ENST00000447515 KIDINS220Q9ULH0 1771 aa24.59■■□□□ 1.53
GGA1-213ENST00000447515 ITSN2Q9NZM3 1697 aa24.59■■□□□ 1.53
GGA1-213ENST00000447515 CAMSAP1Q5T5Y3 1602 aa24.59■■□□□ 1.53
GGA1-213ENST00000447515 CLIP1P30622 1438 aa24.59■■□□□ 1.53
GGA1-213ENST00000447515 ABCC1P33527 1531 aa24.58■■□□□ 1.53
GGA1-213ENST00000447515 UBTFP17480 764 aaKnown RBP24.58■■□□□ 1.53
GGA1-213ENST00000447515 PREX2Q70Z35 1606 aa24.57■■□□□ 1.52
GGA1-213ENST00000447515 NCKAP5LQ9HCH0 1330 aa24.56■■□□□ 1.52
GGA1-213ENST00000447515 ZNF335Q9H4Z2 1342 aaPredicted RBP24.54■■□□□ 1.52
GGA1-213ENST00000447515 CNTLNQ9NXG0 1405 aa24.52■■□□□ 1.52
GGA1-213ENST00000447515 UBAP1LF5GYI3 381 aa24.51■■□□□ 1.51
GGA1-213ENST00000447515 CDC42BPAQ5VT25 1732 aa24.5■■□□□ 1.51
GGA1-213ENST00000447515 MROH2AA6NES4 1674 aa24.5■■□□□ 1.51
GGA1-213ENST00000447515 ZMYM3Q14202 1370 aa24.48■■□□□ 1.51
GGA1-213ENST00000447515 SUPT6HQ7KZ85 1726 aaKnown RBP24.48■■□□□ 1.51
GGA1-213ENST00000447515 NPATQ14207 1427 aa24.47■■□□□ 1.51
GGA1-213ENST00000447515 CLTCQ00610 1675 aaKnown RBP24.46■■□□□ 1.51
GGA1-213ENST00000447515 SAMD9LQ8IVG5 1584 aa24.46■■□□□ 1.51
GGA1-213ENST00000447515 ZNF777Q9ULD5 760 aaPredicted RBP24.43■■□□□ 1.5
GGA1-213ENST00000447515 MYO3AQ8NEV4 1616 aa24.43■■□□□ 1.5
GGA1-213ENST00000447515 ZNF142P52746 1687 aaPredicted RBP24.41■■□□□ 1.5
GGA1-213ENST00000447515 SYCP2Q9BX26 1530 aa24.4■■□□□ 1.5
GGA1-213ENST00000447515 HNRNPMP52272 730 aaKnown RBP eCLIP24.38■■□□□ 1.49
GGA1-213ENST00000447515 CEP170BQ9Y4F5 1589 aaPredicted RBP24.37■■□□□ 1.49
GGA1-213ENST00000447515 SPAG9O60271 1321 aaKnown RBP24.37■■□□□ 1.49
GGA1-213ENST00000447515 PLA2R1Q13018 1463 aa24.37■■□□□ 1.49
GGA1-213ENST00000447515 TCOF1Q13428 1488 aaKnown RBP24.37■■□□□ 1.49
GGA1-213ENST00000447515 PTPRKQ15262 1439 aa24.36■■□□□ 1.49
GGA1-213ENST00000447515 PKD2Q13563 968 aa24.36■■□□□ 1.49
GGA1-213ENST00000447515 CASKIN1Q8WXD9 1431 aa24.35■■□□□ 1.49
GGA1-213ENST00000447515 CCDC18Q5T9S5 1454 aa24.35■■□□□ 1.49
GGA1-213ENST00000447515 ATP7AQ04656 1500 aa24.33■■□□□ 1.49
GGA1-213ENST00000447515 PLXNC1O60486 1568 aa24.33■■□□□ 1.48
GGA1-213ENST00000447515 HSPA1LP34931 641 aa24.32■■□□□ 1.48
GGA1-213ENST00000447515 GGT6Q6P531 493 aa24.32■■□□□ 1.48
GGA1-213ENST00000447515 GPATCH8Q9UKJ3 1502 aaKnown RBP24.31■■□□□ 1.48
GGA1-213ENST00000447515 PPP6R1Q9UPN7 881 aa24.31■■□□□ 1.48
GGA1-213ENST00000447515 MED1Q15648 1581 aaPredicted RBP24.3■■□□□ 1.48
GGA1-213ENST00000447515 INO80Q9ULG1 1556 aaPredicted RBP24.3■■□□□ 1.48
GGA1-213ENST00000447515 A2MP01023 1474 aa24.3■■□□□ 1.48
GGA1-213ENST00000447515 SCAF1Q9H7N4 1312 aaKnown RBP24.3■■□□□ 1.48
GGA1-213ENST00000447515 PIP4K2BP78356 416 aa24.29■■□□□ 1.48
GGA1-213ENST00000447515 DNMT1P26358 1616 aaKnown RBP24.26■■□□□ 1.47
GGA1-213ENST00000447515 A2ML1A8K2U0 1454 aa24.23■■□□□ 1.47
GGA1-213ENST00000447515 POLR1AO95602 1720 aaPredicted RBP24.21■■□□□ 1.47
GGA1-213ENST00000447515 KIAA1107Q9UPP5 1409 aa24.21■■□□□ 1.47
GGA1-213ENST00000447515 CFDP1Q9UEE9 299 aaPredicted RBP24.21■■□□□ 1.47
GGA1-213ENST00000447515 NEURL4Q96JN8 1562 aa24.2■■□□□ 1.47
GGA1-213ENST00000447515 FYCO1Q9BQS8 1478 aa24.2■■□□□ 1.47
GGA1-213ENST00000447515 ADGBQ8N7X0 1667 aa24.2■■□□□ 1.46
GGA1-213ENST00000447515 TOM1O60784 492 aa24.17■■□□□ 1.46
GGA1-213ENST00000447515 FBXO31Q5XUX0 539 aaPredicted RBP24.17■■□□□ 1.46
GGA1-213ENST00000447515 PLEKHH2Q8IVE3 1493 aa24.17■■□□□ 1.46
GGA1-213ENST00000447515 SHANK2Q9UPX8 1470 aa24.17■■□□□ 1.46
GGA1-213ENST00000447515 ZNF644Q9H582 1327 aaPredicted RBP24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms