RNA–Protein interactions for RNA: ENST00000447246.1

LRPPRC-205, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 1 (best)

Gene LRPPRC, Length 1,209 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-205ENST00000447246 HECW1Q76N89 1606 aa25.34■■□□□ 1.65
LRPPRC-205ENST00000447246 UHRF1BP1Q6BDS2 1440 aa25.33■■□□□ 1.65
LRPPRC-205ENST00000447246 PTPRTO14522 1441 aa25.3■■□□□ 1.64
LRPPRC-205ENST00000447246 FAM9AQ8IZU1 332 aaPredicted RBP25.28■■□□□ 1.64
LRPPRC-205ENST00000447246 IQSEC2Q5JU85 1478 aa25.27■■□□□ 1.64
LRPPRC-205ENST00000447246 MAGI2Q86UL8 1455 aa25.27■■□□□ 1.64
LRPPRC-205ENST00000447246 NUP153P49790 1475 aaKnown RBP25.25■■□□□ 1.63
LRPPRC-205ENST00000447246 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.24■■□□□ 1.631e-6■■■□□ 18.2
LRPPRC-205ENST00000447246 C9orf84Q5VXU9 1444 aa25.2■■□□□ 1.63
LRPPRC-205ENST00000447246 ATP10AO60312 1499 aa25.2■■□□□ 1.62
LRPPRC-205ENST00000447246 SAMD9Q5K651 1589 aa25.19■■□□□ 1.62
LRPPRC-205ENST00000447246 PRXQ9BXM0 1461 aa25.17■■□□□ 1.62
LRPPRC-205ENST00000447246 UBAP1LF5GYI3 381 aa25.17■■□□□ 1.62
LRPPRC-205ENST00000447246 SETD1BQ9UPS6 1966 aaKnown RBP25.16■■□□□ 1.62
LRPPRC-205ENST00000447246 SCAPERQ9BY12 1400 aa25.16■■□□□ 1.62
LRPPRC-205ENST00000447246 MED1Q15648 1581 aaPredicted RBP25.15■■□□□ 1.62
LRPPRC-205ENST00000447246 C3P01024 1663 aa25.14■■□□□ 1.62
LRPPRC-205ENST00000447246 PLEKHD1A6NEE1 506 aa25.12■■□□□ 1.61
LRPPRC-205ENST00000447246 NCOA1Q15788 1441 aa25.12■■□□□ 1.61
LRPPRC-205ENST00000447246 ZNF335Q9H4Z2 1342 aaPredicted RBP25.08■■□□□ 1.6
LRPPRC-205ENST00000447246 CAMSAP1Q5T5Y3 1602 aa25.02■■□□□ 1.6
LRPPRC-205ENST00000447246 RANGAP1P46060 587 aaPredicted RBP25.02■■□□□ 1.6
LRPPRC-205ENST00000447246 PLCH2O75038 1416 aa24.99■■□□□ 1.59
LRPPRC-205ENST00000447246 HSPA1LP34931 641 aa24.99■■□□□ 1.59
LRPPRC-205ENST00000447246 TRAPPC8Q9Y2L5 1435 aa24.99■■□□□ 1.59
LRPPRC-205ENST00000447246 DIP2CQ9Y2E4 1556 aa24.98■■□□□ 1.59
LRPPRC-205ENST00000447246 SCAF1Q9H7N4 1312 aaKnown RBP24.98■■□□□ 1.59
LRPPRC-205ENST00000447246 NCKAP5LQ9HCH0 1330 aa24.98■■□□□ 1.59
LRPPRC-205ENST00000447246 CDK13Q14004 1512 aaKnown RBP24.96■■□□□ 1.59
LRPPRC-205ENST00000447246 MYT1LQ9UL68 1186 aa24.94■■□□□ 1.58
LRPPRC-205ENST00000447246 ABCA6Q8N139 1617 aa24.94■■□□□ 1.58
LRPPRC-205ENST00000447246 MYO5CQ9NQX4 1742 aa24.92■■□□□ 1.58
LRPPRC-205ENST00000447246 ZNF518AQ6AHZ1 1483 aa24.92■■□□□ 1.58
LRPPRC-205ENST00000447246 PIP4K2BP78356 416 aa24.92■■□□□ 1.58
LRPPRC-205ENST00000447246 KDM5CP41229 1560 aa24.92■■□□□ 1.58
LRPPRC-205ENST00000447246 AFAP1Q8N556 730 aa24.91■■□□□ 1.58
LRPPRC-205ENST00000447246 PHF23Q9BUL5 403 aaPredicted RBP24.91■■□□□ 1.58
LRPPRC-205ENST00000447246 ESF1Q9H501 851 aaKnown RBP24.91■■□□□ 1.58
LRPPRC-205ENST00000447246 REREQ9P2R6 1566 aa24.89■■□□□ 1.58
LRPPRC-205ENST00000447246 EFCAB2Q5VUJ9 269 aa24.87■■□□□ 1.57
LRPPRC-205ENST00000447246 AGLP35573 1532 aa24.84■■□□□ 1.57
LRPPRC-205ENST00000447246 KIF14Q15058 1648 aa24.82■■□□□ 1.56
LRPPRC-205ENST00000447246 ARHGAP5Q13017 1502 aa24.81■■□□□ 1.56
LRPPRC-205ENST00000447246 SUPT6HQ7KZ85 1726 aaKnown RBP24.81■■□□□ 1.56
LRPPRC-205ENST00000447246 CNTLNQ9NXG0 1405 aa24.78■■□□□ 1.56
LRPPRC-205ENST00000447246 MYO3AQ8NEV4 1616 aa24.78■■□□□ 1.56
LRPPRC-205ENST00000447246 NPATQ14207 1427 aa24.78■■□□□ 1.56
LRPPRC-205ENST00000447246 ZNF142P52746 1687 aaPredicted RBP24.76■■□□□ 1.55
LRPPRC-205ENST00000447246 PLA2R1Q13018 1463 aa24.76■■□□□ 1.55
LRPPRC-205ENST00000447246 TCOF1Q13428 1488 aaKnown RBP24.76■■□□□ 1.55
LRPPRC-205ENST00000447246 MLH3Q9UHC1 1453 aa24.75■■□□□ 1.55
LRPPRC-205ENST00000447246 MROH2AA6NES4 1674 aa24.75■■□□□ 1.55
LRPPRC-205ENST00000447246 SENP3Q9H4L4 574 aaPredicted RBP24.74■■□□□ 1.55
LRPPRC-205ENST00000447246 PPP6R1Q9UPN7 881 aa24.74■■□□□ 1.55
LRPPRC-205ENST00000447246 CEP170BQ9Y4F5 1589 aaPredicted RBP24.73■■□□□ 1.55
LRPPRC-205ENST00000447246 PKD2Q13563 968 aa24.73■■□□□ 1.55
LRPPRC-205ENST00000447246 TOM1O60784 492 aa24.71■■□□□ 1.55
LRPPRC-205ENST00000447246 ZMYM3Q14202 1370 aa24.69■■□□□ 1.54
LRPPRC-205ENST00000447246 KIDINS220Q9ULH0 1771 aa24.68■■□□□ 1.54
LRPPRC-205ENST00000447246 ATP1B4Q9UN42 357 aaPredicted RBP24.68■■□□□ 1.54
LRPPRC-205ENST00000447246 CLTCQ00610 1675 aaKnown RBP24.67■■□□□ 1.54
LRPPRC-205ENST00000447246 CDC42BPBQ9Y5S2 1711 aa24.66■■□□□ 1.54
LRPPRC-205ENST00000447246 ALKQ9UM73 1620 aa24.65■■□□□ 1.54
LRPPRC-205ENST00000447246 CSRNP3Q8WYN3 585 aa24.65■■□□□ 1.54
LRPPRC-205ENST00000447246 ITSN2Q9NZM3 1697 aa24.65■■□□□ 1.54
LRPPRC-205ENST00000447246 ABCC1P33527 1531 aa24.65■■□□□ 1.54
LRPPRC-205ENST00000447246 CPS1P31327 1500 aa24.64■■□□□ 1.53
LRPPRC-205ENST00000447246 PTPRKQ15262 1439 aa24.61■■□□□ 1.53
LRPPRC-205ENST00000447246 SHANK2Q9UPX8 1470 aa24.6■■□□□ 1.53
LRPPRC-205ENST00000447246 RGS17Q9UGC6 210 aaPredicted RBP24.59■■□□□ 1.53
LRPPRC-205ENST00000447246 TROQ12816 1431 aaPredicted RBP24.59■■□□□ 1.53
LRPPRC-205ENST00000447246 NEURL4Q96JN8 1562 aa24.58■■□□□ 1.52
LRPPRC-205ENST00000447246 POLR1AO95602 1720 aaPredicted RBP24.58■■□□□ 1.52
LRPPRC-205ENST00000447246 PREX2Q70Z35 1606 aa24.57■■□□□ 1.52
LRPPRC-205ENST00000447246 DNMT1P26358 1616 aaKnown RBP24.54■■□□□ 1.52
LRPPRC-205ENST00000447246 CDK11AQ9UQ88 783 aaPredicted RBP24.53■■□□□ 1.52
LRPPRC-205ENST00000447246 CLIP1P30622 1438 aa24.52■■□□□ 1.52
LRPPRC-205ENST00000447246 SAMD9LQ8IVG5 1584 aa24.51■■□□□ 1.51
LRPPRC-205ENST00000447246 VWDEQ8N2E2 1590 aa24.51■■□□□ 1.51
LRPPRC-205ENST00000447246 A2ML1A8K2U0 1454 aa24.51■■□□□ 1.51
LRPPRC-205ENST00000447246 LRRIQ1Q96JM4 1722 aa24.49■■□□□ 1.51
LRPPRC-205ENST00000447246 SETD1AO15047 1707 aaKnown RBP24.45■■□□□ 1.5
LRPPRC-205ENST00000447246 PLXNC1O60486 1568 aa24.44■■□□□ 1.5
LRPPRC-205ENST00000447246 GGT6Q6P531 493 aa24.43■■□□□ 1.5
LRPPRC-205ENST00000447246 FMN1Q68DA7 1419 aa24.43■■□□□ 1.5
LRPPRC-205ENST00000447246 POTEAQ6S8J7 498 aa24.42■■□□□ 1.5
LRPPRC-205ENST00000447246 CDC42BPAQ5VT25 1732 aa24.41■■□□□ 1.5
LRPPRC-205ENST00000447246 SYCP2Q9BX26 1530 aa24.41■■□□□ 1.5
LRPPRC-205ENST00000447246 STRCP1A6NGW2 1772 aa24.39■■□□□ 1.5
LRPPRC-205ENST00000447246 RNF17Q9BXT8 1623 aaKnown RBP24.39■■□□□ 1.5
LRPPRC-205ENST00000447246 SPAG9O60271 1321 aaKnown RBP24.39■■□□□ 1.5
LRPPRC-205ENST00000447246 ATP7AQ04656 1500 aa24.39■■□□□ 1.49
LRPPRC-205ENST00000447246 ZNF777Q9ULD5 760 aaPredicted RBP24.38■■□□□ 1.49
LRPPRC-205ENST00000447246 A2MP01023 1474 aa24.38■■□□□ 1.49
LRPPRC-205ENST00000447246 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.36■■□□□ 1.49
LRPPRC-205ENST00000447246 LRRC7Q96NW7 1537 aa24.35■■□□□ 1.49
LRPPRC-205ENST00000447246 INO80Q9ULG1 1556 aaPredicted RBP24.35■■□□□ 1.49
LRPPRC-205ENST00000447246 ARHGAP35Q9NRY4 1499 aa24.34■■□□□ 1.49
LRPPRC-205ENST00000447246 NPHP4O75161 1426 aaPredicted RBP24.34■■□□□ 1.49
LRPPRC-205ENST00000447246 TNRQ92752 1358 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms