RNA–Protein interactions for RNA: ENST00000446204.6

VPS8-210, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS8, Length 4,721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-210ENST00000446204 CFTRP13569 1480 aa10.42□□□□□ -0.74
VPS8-210ENST00000446204 CFAP53Q96M91 514 aa10.42□□□□□ -0.74
VPS8-210ENST00000446204 IPO9Q96P70 1041 aaKnown RBP10.42□□□□□ -0.74
VPS8-210ENST00000446204 ARXQ96QS3 562 aa10.42□□□□□ -0.74
VPS8-210ENST00000446204 STAG3Q9UJ98 1225 aa10.42□□□□□ -0.74
VPS8-210ENST00000446204 CARMIL2Q6F5E8 1435 aa10.4□□□□□ -0.74
VPS8-210ENST00000446204 NLRP13Q86W25 1043 aa10.4□□□□□ -0.74
VPS8-210ENST00000446204 RAD54L2Q9Y4B4 1467 aa10.4□□□□□ -0.74
VPS8-210ENST00000446204 CUX1P39880 1505 aa10.4□□□□□ -0.74
VPS8-210ENST00000446204 SLC24A1O60721 1099 aa10.4□□□□□ -0.75
VPS8-210ENST00000446204 PDE3BQ13370 1112 aa10.4□□□□□ -0.75
VPS8-210ENST00000446204 NEUROD2Q15784 382 aa10.39□□□□□ -0.75
VPS8-210ENST00000446204 FYCO1Q9BQS8 1478 aa10.39□□□□□ -0.75
VPS8-210ENST00000446204 CCDC7Q96M83 1385 aa10.39□□□□□ -0.75
VPS8-210ENST00000446204 KIF15Q9NS87 1388 aa10.39□□□□□ -0.75
VPS8-210ENST00000446204 WASHC2AQ641Q2 1341 aa10.39□□□□□ -0.75
VPS8-210ENST00000446204 TIAM1Q13009 1591 aa10.38□□□□□ -0.75
VPS8-210ENST00000446204 FRAT1Q92837 279 aaPredicted RBP10.38□□□□□ -0.75
VPS8-210ENST00000446204 CNTLNQ9NXG0 1405 aa10.37□□□□□ -0.75
VPS8-210ENST00000446204 MYBBP1AQ9BQG0 1328 aaKnown RBP10.37□□□□□ -0.75
VPS8-210ENST00000446204 ERCC6Q03468 1493 aa10.37□□□□□ -0.75
VPS8-210ENST00000446204 USP47Q96K76 1375 aa10.37□□□□□ -0.75
VPS8-210ENST00000446204 ST20-MTHFSA0A0A6YYL1 179 aa10.37□□□□□ -0.75
VPS8-210ENST00000446204 NCOA2Q15596 1464 aa10.37□□□□□ -0.75
VPS8-210ENST00000446204 FTSJ3Q8IY81 847 aaKnown RBP10.36□□□□□ -0.75
VPS8-210ENST00000446204 RTN4Q9NQC3 1192 aaKnown RBP10.36□□□□□ -0.75
VPS8-210ENST00000446204 KIF7Q2M1P5 1343 aa10.36□□□□□ -0.75
VPS8-210ENST00000446204 WDR97A6NE52 1622 aa10.36□□□□□ -0.75
VPS8-210ENST00000446204 GAPVD1Q14C86 1478 aa10.36□□□□□ -0.75
VPS8-210ENST00000446204 MYH16Q9H6N6 1097 aa10.35□□□□□ -0.75
VPS8-210ENST00000446204 HNRNPMP52272 730 aaKnown RBP eCLIP10.34□□□□□ -0.75
VPS8-210ENST00000446204 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.34□□□□□ -0.75
VPS8-210ENST00000446204 TNNT2P45379 298 aaPredicted RBP10.33□□□□□ -0.75
VPS8-210ENST00000446204 HFM1A2PYH4 1435 aa10.33□□□□□ -0.76
VPS8-210ENST00000446204 RSPH4AQ5TD94 716 aa10.33□□□□□ -0.76
VPS8-210ENST00000446204 EFCAB5A4FU69 1503 aa10.33□□□□□ -0.76
VPS8-210ENST00000446204 HMGXB3Q12766 1538 aa10.33□□□□□ -0.76
VPS8-210ENST00000446204 RRP1P56182 461 aaKnown RBP10.32□□□□□ -0.76
VPS8-210ENST00000446204 ESF1Q9H501 851 aaKnown RBP10.32□□□□□ -0.76
VPS8-210ENST00000446204 GLIPR1L2Q4G1C9 344 aa10.32□□□□□ -0.76
VPS8-210ENST00000446204 MS4A1P11836 297 aa10.32□□□□□ -0.76
VPS8-210ENST00000446204 ARID4BQ4LE39 1312 aaPredicted RBP10.31□□□□□ -0.76
VPS8-210ENST00000446204 KANK1Q14678 1352 aa10.31□□□□□ -0.76
VPS8-210ENST00000446204 MAPK8IP3Q9UPT6 1336 aa10.31□□□□□ -0.76
VPS8-210ENST00000446204 GOLGA2Q08379 1002 aa10.31□□□□□ -0.76
VPS8-210ENST00000446204 EXOC6Q8TAG9 804 aa10.31□□□□□ -0.76
VPS8-210ENST00000446204 ZNF644Q9H582 1327 aaPredicted RBP10.3□□□□□ -0.76
VPS8-210ENST00000446204 JPH4Q96JJ6 628 aa10.3□□□□□ -0.76
VPS8-210ENST00000446204 PEG3Q9GZU2 1588 aa10.3□□□□□ -0.76
VPS8-210ENST00000446204 PDE4AP27815 886 aa10.3□□□□□ -0.76
VPS8-210ENST00000446204 MORC1Q86VD1 984 aa10.3□□□□□ -0.76
VPS8-210ENST00000446204 MAP3K1Q13233 1512 aa10.29□□□□□ -0.76
VPS8-210ENST00000446204 SENP3Q9H4L4 574 aaPredicted RBP10.29□□□□□ -0.76
VPS8-210ENST00000446204 BICRAQ9NZM4 1560 aa10.29□□□□□ -0.76
VPS8-210ENST00000446204 GOLGA6L22H0YM25 854 aa10.29□□□□□ -0.76
VPS8-210ENST00000446204 TRIM44Q96DX7 344 aaPredicted RBP10.29□□□□□ -0.76
VPS8-210ENST00000446204 PANK3Q9H999 370 aa10.28□□□□□ -0.76
VPS8-210ENST00000446204 CCDC144AA2RUR9 1427 aa10.28□□□□□ -0.76
VPS8-210ENST00000446204 USP35Q9P2H5 1018 aa10.28□□□□□ -0.76
VPS8-210ENST00000446204 EFCAB2Q5VUJ9 269 aa10.27□□□□□ -0.76
VPS8-210ENST00000446204 U2SURPO15042 1029 aaKnown RBP10.27□□□□□ -0.77
VPS8-210ENST00000446204 PLIN1O60240 522 aa10.26□□□□□ -0.77
VPS8-210ENST00000446204 NAIPQ13075 1403 aa10.26□□□□□ -0.77
VPS8-210ENST00000446204 NBPF8Q3BBV2 869 aa10.25□□□□□ -0.77
VPS8-210ENST00000446204 EHBP1L1Q8N3D4 1523 aa10.25□□□□□ -0.77
VPS8-210ENST00000446204 CHMP4BQ9H444 224 aaKnown RBP10.25□□□□□ -0.77
VPS8-210ENST00000446204 EIF3AQ14152 1382 aaKnown RBP10.25□□□□□ -0.77
VPS8-210ENST00000446204 CENPQQ7L2Z9 268 aaPredicted RBP10.25□□□□□ -0.77
VPS8-210ENST00000446204 MIA2Q96PC5 1412 aa10.24□□□□□ -0.77
VPS8-210ENST00000446204 CRBNQ96SW2 442 aa10.24□□□□□ -0.77
VPS8-210ENST00000446204 CCDC184Q52MB2 194 aa10.24□□□□□ -0.77
VPS8-210ENST00000446204 CCDC146Q8IYE0 955 aa10.24□□□□□ -0.77
VPS8-210ENST00000446204 PNNQ9H307 717 aaKnown RBP10.24□□□□□ -0.77
VPS8-210ENST00000446204 L1TD1Q5T7N2 865 aaKnown RBP10.24□□□□□ -0.77
VPS8-210ENST00000446204 POGKQ9P215 609 aa10.24□□□□□ -0.77
VPS8-210ENST00000446204 POLA1P09884 1462 aaPredicted RBP10.23□□□□□ -0.77
VPS8-210ENST00000446204 PCF11O94913 1555 aaKnown RBP10.23□□□□□ -0.77
VPS8-210ENST00000446204 RWDD1Q9H446 243 aaPredicted RBP10.23□□□□□ -0.77
VPS8-210ENST00000446204 BRD4O60885 1362 aaPredicted RBP10.23□□□□□ -0.77
VPS8-210ENST00000446204 ANKRD50Q9ULJ7 1429 aa10.22□□□□□ -0.77
VPS8-210ENST00000446204 TOPBP1Q92547 1522 aa10.22□□□□□ -0.77
VPS8-210ENST00000446204 HSCBQ8IWL3 235 aa10.22□□□□□ -0.77
VPS8-210ENST00000446204 BIVM-ERCC5R4GMW8 1640 aa10.22□□□□□ -0.77
VPS8-210ENST00000446204 AQRO60306 1485 aaKnown RBP eCLIP10.22□□□□□ -0.775e-6■■■■□ 19.7
VPS8-210ENST00000446204 PMFBP1Q8TBY8 1022 aa10.22□□□□□ -0.77
VPS8-210ENST00000446204 HSP90AB1P08238 724 aaKnown RBP10.22□□□□□ -0.77
VPS8-210ENST00000446204 FAM161AQ3B820 660 aa10.22□□□□□ -0.77
VPS8-210ENST00000446204 CENPJQ9HC77 1338 aaPredicted RBP10.21□□□□□ -0.78
VPS8-210ENST00000446204 SLKQ9H2G2 1235 aaPredicted RBP10.21□□□□□ -0.78
VPS8-210ENST00000446204 NCLP19338 710 aaKnown RBP10.21□□□□□ -0.78
VPS8-210ENST00000446204 CASC1Q6TDU7 716 aa10.21□□□□□ -0.78
VPS8-210ENST00000446204 U2AF1L5P0DN76 240 aaPredicted RBP10.2□□□□□ -0.78
VPS8-210ENST00000446204 U2AF1Q01081 240 aaKnown RBP eCLIP10.2□□□□□ -0.78
VPS8-210ENST00000446204 SRPK2P78362 688 aaKnown RBP10.19□□□□□ -0.78
VPS8-210ENST00000446204 SPRYD3Q8NCJ5 442 aa10.19□□□□□ -0.78
VPS8-210ENST00000446204 DNAJC5Q9H3Z4 198 aa10.19□□□□□ -0.78
VPS8-210ENST00000446204 MAPKBP1O60336 1514 aa10.19□□□□□ -0.78
VPS8-210ENST00000446204 SPAG9O60271 1321 aaKnown RBP10.19□□□□□ -0.78
VPS8-210ENST00000446204 PNISRQ8TF01 805 aaKnown RBP10.19□□□□□ -0.78
VPS8-210ENST00000446204 KIF3BO15066 747 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms