RNA–Protein interactions for RNA: ENST00000443537.2

R3HDM1-210, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 710 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-210ENST00000443537 BCANQ96GW7 911 aa12.08□□□□□ -0.48
R3HDM1-210ENST00000443537 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.05□□□□□ -0.483e-6■■■□□ 15.8
R3HDM1-210ENST00000443537 GABBR2O75899 941 aa12.04□□□□□ -0.48
R3HDM1-210ENST00000443537 MS4A4AQ96JQ5 239 aa12.03□□□□□ -0.48
R3HDM1-210ENST00000443537 PDS5BQ9NTI5 1447 aa12.03□□□□□ -0.48
R3HDM1-210ENST00000443537 ATN1P54259 1190 aaPredicted RBP12.02□□□□□ -0.49
R3HDM1-210ENST00000443537 CADPS2Q86UW7 1296 aa12.02□□□□□ -0.49
R3HDM1-210ENST00000443537 WDR70Q9NW82 654 aa12.01□□□□□ -0.49
R3HDM1-210ENST00000443537 ATMINO43313 823 aaPredicted RBP12□□□□□ -0.49
R3HDM1-210ENST00000443537 DCBLD2Q96PD2 775 aa12□□□□□ -0.49
R3HDM1-210ENST00000443537 ASTLQ6HA08 431 aaPredicted RBP11.98□□□□□ -0.49
R3HDM1-210ENST00000443537 FANCD2Q9BXW9 1451 aa11.97□□□□□ -0.49
R3HDM1-210ENST00000443537 ABCC8Q09428 1581 aa11.96□□□□□ -0.49
R3HDM1-210ENST00000443537 CEP164Q9UPV0 1460 aa11.96□□□□□ -0.49
R3HDM1-210ENST00000443537 NESP48681 1621 aa11.95□□□□□ -0.5
R3HDM1-210ENST00000443537 BIVM-ERCC5R4GMW8 1640 aa11.94□□□□□ -0.5
R3HDM1-210ENST00000443537 NBR1Q14596 966 aa11.94□□□□□ -0.5
R3HDM1-210ENST00000443537 WRNQ14191 1432 aaPredicted RBP eCLIP11.94□□□□□ -0.5
R3HDM1-210ENST00000443537 KIF21AQ7Z4S6 1674 aa11.94□□□□□ -0.5
R3HDM1-210ENST00000443537 TOP2BQ02880 1626 aa11.93□□□□□ -0.5
R3HDM1-210ENST00000443537 IER5LQ5T953 404 aa11.92□□□□□ -0.5
R3HDM1-210ENST00000443537 ILDR1Q86SU0 546 aaPredicted RBP11.91□□□□□ -0.5
R3HDM1-210ENST00000443537 PLCG2P16885 1265 aa11.9□□□□□ -0.5
R3HDM1-210ENST00000443537 DPY19L2Q6NUT2 758 aa11.9□□□□□ -0.5
R3HDM1-210ENST00000443537 DNMBPQ6XZF7 1577 aa11.9□□□□□ -0.5
R3HDM1-210ENST00000443537 OCEL1Q9H607 264 aa11.9□□□□□ -0.5
R3HDM1-210ENST00000443537 G3V3G9 751 aa11.89□□□□□ -0.51
R3HDM1-210ENST00000443537 P3H3Q8IVL6 736 aa11.89□□□□□ -0.51
R3HDM1-210ENST00000443537 SEC24BO95487 1268 aa11.88□□□□□ -0.51
R3HDM1-210ENST00000443537 PDE4AP27815 886 aa11.87□□□□□ -0.51
R3HDM1-210ENST00000443537 IRX5P78411 483 aaPredicted RBP11.87□□□□□ -0.51
R3HDM1-210ENST00000443537 PDCD7Q8N8D1 485 aaKnown RBP11.87□□□□□ -0.51
R3HDM1-210ENST00000443537 SP7Q8TDD2 431 aaPredicted RBP11.87□□□□□ -0.51
R3HDM1-210ENST00000443537 ERCC6Q03468 1493 aa11.87□□□□□ -0.51
R3HDM1-210ENST00000443537 LARP6Q9BRS8 491 aaKnown RBP11.86□□□□□ -0.51
R3HDM1-210ENST00000443537 MRC2Q9UBG0 1479 aa11.86□□□□□ -0.51
R3HDM1-210ENST00000443537 SYNJ1O43426 1573 aa11.86□□□□□ -0.51
R3HDM1-210ENST00000443537 CUX1P39880 1505 aa11.86□□□□□ -0.51
R3HDM1-210ENST00000443537 PELP1Q8IZL8 1130 aaKnown RBP11.84□□□□□ -0.51
R3HDM1-210ENST00000443537 NCKAP5LQ9HCH0 1330 aa11.84□□□□□ -0.51
R3HDM1-210ENST00000443537 WDR62O43379 1518 aa11.83□□□□□ -0.52
R3HDM1-210ENST00000443537 TOPBP1Q92547 1522 aa11.83□□□□□ -0.52
R3HDM1-210ENST00000443537 SLC39A7Q92504 469 aa11.83□□□□□ -0.52
R3HDM1-210ENST00000443537 MICALL2Q8IY33 904 aa11.82□□□□□ -0.52
R3HDM1-210ENST00000443537 THOC2Q8NI27 1593 aaKnown RBP11.82□□□□□ -0.52
R3HDM1-210ENST00000443537 KCNV2Q8TDN2 545 aa11.81□□□□□ -0.52
R3HDM1-210ENST00000443537 BOLA1Q9Y3E2 137 aa11.81□□□□□ -0.52
R3HDM1-210ENST00000443537 E2F4Q16254 413 aa11.8□□□□□ -0.52
R3HDM1-210ENST00000443537 DDX27Q96GQ7 796 aaKnown RBP11.8□□□□□ -0.52
R3HDM1-210ENST00000443537 CRISPLD2Q9H0B8 497 aa11.8□□□□□ -0.52
R3HDM1-210ENST00000443537 URB2Q14146 1524 aaKnown RBP11.8□□□□□ -0.52
R3HDM1-210ENST00000443537 EEA1Q15075 1411 aa11.79□□□□□ -0.52
R3HDM1-210ENST00000443537 C7P10643 843 aa11.79□□□□□ -0.52
R3HDM1-210ENST00000443537 L3MBTL3Q96JM7 780 aaPredicted RBP11.79□□□□□ -0.52
R3HDM1-210ENST00000443537 WDR97A6NE52 1622 aa11.78□□□□□ -0.52
R3HDM1-210ENST00000443537 METRNQ9UJH8 293 aa11.77□□□□□ -0.53
R3HDM1-210ENST00000443537 COLQQ9Y215 455 aaPredicted RBP11.77□□□□□ -0.53
R3HDM1-210ENST00000443537 FGD5Q6ZNL6 1462 aa11.76□□□□□ -0.53
R3HDM1-210ENST00000443537 TMC2Q8TDI7 906 aa11.76□□□□□ -0.53
R3HDM1-210ENST00000443537 MFSD10Q14728 455 aa11.75□□□□□ -0.53
R3HDM1-210ENST00000443537 POTEIP0CG38 1075 aa11.74□□□□□ -0.53
R3HDM1-210ENST00000443537 GPHNQ9NQX3 736 aaPredicted RBP11.74□□□□□ -0.53
R3HDM1-210ENST00000443537 POLA1P09884 1462 aaPredicted RBP11.74□□□□□ -0.53
R3HDM1-210ENST00000443537 ABCA10Q8WWZ4 1543 aa11.72□□□□□ -0.53
R3HDM1-210ENST00000443537 PPP1R15BQ5SWA1 713 aa11.72□□□□□ -0.53
R3HDM1-210ENST00000443537 TMEM121BQ9BXQ6 578 aaPredicted RBP11.72□□□□□ -0.53
R3HDM1-210ENST00000443537 ARHGEF1Q92888 912 aaKnown RBP11.71□□□□□ -0.53
R3HDM1-210ENST00000443537 IFT140Q96RY7 1462 aa11.7□□□□□ -0.54
R3HDM1-210ENST00000443537 KIF27Q86VH2 1401 aa11.69□□□□□ -0.54
R3HDM1-210ENST00000443537 TARBP1Q13395 1621 aaKnown RBP11.69□□□□□ -0.54
R3HDM1-210ENST00000443537 SOGA1O94964 1423 aa11.69□□□□□ -0.54
R3HDM1-210ENST00000443537 CUX2O14529 1486 aa11.68□□□□□ -0.54
R3HDM1-210ENST00000443537 POTEFA5A3E0 1075 aa11.67□□□□□ -0.54
R3HDM1-210ENST00000443537 TPRNQ4KMQ1 711 aa11.67□□□□□ -0.54
R3HDM1-210ENST00000443537 C2orf72A6NCS6 295 aa11.66□□□□□ -0.54
R3HDM1-210ENST00000443537 DSG2Q14126 1118 aa11.66□□□□□ -0.54
R3HDM1-210ENST00000443537 C3orf67Q6ZVT6 689 aa11.66□□□□□ -0.54
R3HDM1-210ENST00000443537 ABCA5Q8WWZ7 1642 aa11.65□□□□□ -0.54
R3HDM1-210ENST00000443537 PRKCSHP14314 528 aaPredicted RBP11.64□□□□□ -0.55
R3HDM1-210ENST00000443537 CUL7Q14999 1698 aa11.63□□□□□ -0.55
R3HDM1-210ENST00000443537 FOXK1P85037 733 aa11.63□□□□□ -0.55
R3HDM1-210ENST00000443537 CAMK2BQ13554 666 aa11.63□□□□□ -0.55
R3HDM1-210ENST00000443537 ERICH3Q5RHP9 1530 aa11.63□□□□□ -0.55
R3HDM1-210ENST00000443537 TULP1O00294 542 aaPredicted RBP11.62□□□□□ -0.55
R3HDM1-210ENST00000443537 PLPP6Q8IY26 295 aa11.62□□□□□ -0.55
R3HDM1-210ENST00000443537 PBRM1Q86U86 1689 aa11.61□□□□□ -0.55
R3HDM1-210ENST00000443537 KIF21BO75037 1637 aa11.6□□□□□ -0.55
R3HDM1-210ENST00000443537 RAD54L2Q9Y4B4 1467 aa11.6□□□□□ -0.55
R3HDM1-210ENST00000443537 GAPVD1Q14C86 1478 aa11.59□□□□□ -0.55
R3HDM1-210ENST00000443537 KIF3CO14782 793 aa11.59□□□□□ -0.55
R3HDM1-210ENST00000443537 EIF4G3O43432 1585 aaKnown RBP11.58□□□□□ -0.56
R3HDM1-210ENST00000443537 SEMA3EO15041 775 aa11.57□□□□□ -0.56
R3HDM1-210ENST00000443537 TMEM92Q6UXU6 159 aa11.57□□□□□ -0.56
R3HDM1-210ENST00000443537 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.56□□□□□ -0.56
R3HDM1-210ENST00000443537 ARIH1Q9Y4X5 557 aaPredicted RBP11.56□□□□□ -0.56
R3HDM1-210ENST00000443537 GRIN2BQ13224 1484 aa11.56□□□□□ -0.56
R3HDM1-210ENST00000443537 DPYSL4O14531 572 aa11.55□□□□□ -0.56
R3HDM1-210ENST00000443537 EMILIN3Q9NT22 766 aa11.55□□□□□ -0.56
R3HDM1-210ENST00000443537 MAGI1Q96QZ7 1491 aaPredicted RBP11.53□□□□□ -0.56
R3HDM1-210ENST00000443537 PRXQ9BXM0 1461 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms