RNA–Protein interactions for RNA: ENST00000441556.5

CTTNBP2-206, Transcript of cortactin binding protein 2, humanhuman

TSL 5

Gene CTTNBP2, Length 5,517 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTNBP2-206ENST00000441556 HDGFP51858 240 aaKnown RBP19.95■□□□□ 0.78
CTTNBP2-206ENST00000441556 KIF3BO15066 747 aa19.95■□□□□ 0.78
CTTNBP2-206ENST00000441556 PPP4R2Q9NY27 417 aa19.95■□□□□ 0.78
CTTNBP2-206ENST00000441556 KTN1Q86UP2 1357 aaKnown RBP19.93■□□□□ 0.78
CTTNBP2-206ENST00000441556 SRPK2P78362 688 aaKnown RBP19.93■□□□□ 0.78
CTTNBP2-206ENST00000441556 AQRO60306 1485 aaKnown RBP eCLIP19.93■□□□□ 0.78
CTTNBP2-206ENST00000441556 FTSJ3Q8IY81 847 aaKnown RBP19.9■□□□□ 0.78
CTTNBP2-206ENST00000441556 TOP2BQ02880 1626 aa19.9■□□□□ 0.78
CTTNBP2-206ENST00000441556 U2SURPO15042 1029 aaKnown RBP19.9■□□□□ 0.78
CTTNBP2-206ENST00000441556 CC2D2AQ9P2K1 1620 aa19.9■□□□□ 0.78
CTTNBP2-206ENST00000441556 SAFB2Q14151 953 aaKnown RBP eCLIP19.89■□□□□ 0.78
CTTNBP2-206ENST00000441556 MORC1Q86VD1 984 aa19.89■□□□□ 0.77
CTTNBP2-206ENST00000441556 CUX1P39880 1505 aa19.88■□□□□ 0.77
CTTNBP2-206ENST00000441556 TRHP20396 242 aaPredicted RBP19.88■□□□□ 0.77
CTTNBP2-206ENST00000441556 LAS1LQ9Y4W2 734 aaKnown RBP19.88■□□□□ 0.77
CTTNBP2-206ENST00000441556 LRRC9Q6ZRR7 1453 aa19.87■□□□□ 0.77
CTTNBP2-206ENST00000441556 FGD6Q6ZV73 1430 aa19.87■□□□□ 0.77
CTTNBP2-206ENST00000441556 NESP48681 1621 aa19.86■□□□□ 0.77
CTTNBP2-206ENST00000441556 PNNQ9H307 717 aaKnown RBP19.86■□□□□ 0.77
CTTNBP2-206ENST00000441556 STK26Q9P289 416 aa19.86■□□□□ 0.77
CTTNBP2-206ENST00000441556 RALBP1Q15311 655 aa19.86■□□□□ 0.77
CTTNBP2-206ENST00000441556 CASKIN1Q8WXD9 1431 aa19.85■□□□□ 0.77
CTTNBP2-206ENST00000441556 MYOM3Q5VTT5 1437 aa19.85■□□□□ 0.77
CTTNBP2-206ENST00000441556 EIF3AQ14152 1382 aaKnown RBP19.85■□□□□ 0.77
CTTNBP2-206ENST00000441556 GRIN2BQ13224 1484 aa19.84■□□□□ 0.77
CTTNBP2-206ENST00000441556 DDRGK1Q96HY6 314 aa19.84■□□□□ 0.77
CTTNBP2-206ENST00000441556 PHLDB1Q86UU1 1377 aa19.83■□□□□ 0.77
CTTNBP2-206ENST00000441556 ANP32BQ92688 251 aaKnown RBP19.83■□□□□ 0.76
CTTNBP2-206ENST00000441556 FRAT1Q92837 279 aaPredicted RBP19.83■□□□□ 0.76
CTTNBP2-206ENST00000441556 ARAP1Q96P48 1450 aa19.83■□□□□ 0.76
CTTNBP2-206ENST00000441556 PRXQ9BXM0 1461 aa19.81■□□□□ 0.76
CTTNBP2-206ENST00000441556 HAP1P54257 671 aaPredicted RBP19.81■□□□□ 0.76
CTTNBP2-206ENST00000441556 BICRAQ9NZM4 1560 aa19.81■□□□□ 0.76
CTTNBP2-206ENST00000441556 CCDC144AA2RUR9 1427 aa19.81■□□□□ 0.76
CTTNBP2-206ENST00000441556 A0A0G2JS52 829 aa19.8■□□□□ 0.76
CTTNBP2-206ENST00000441556 TOPBP1Q92547 1522 aa19.8■□□□□ 0.76
CTTNBP2-206ENST00000441556 WASHC2CQ9Y4E1 1318 aa19.79■□□□□ 0.76
CTTNBP2-206ENST00000441556 LMOD2Q6P5Q4 547 aa19.79■□□□□ 0.76
CTTNBP2-206ENST00000441556 MRC2Q9UBG0 1479 aa19.78■□□□□ 0.76
CTTNBP2-206ENST00000441556 BECN1Q14457 450 aa19.78■□□□□ 0.76
CTTNBP2-206ENST00000441556 HDGFL2Q7Z4V5 671 aaPredicted RBP19.78■□□□□ 0.76
CTTNBP2-206ENST00000441556 B4GALNT3Q6L9W6 998 aa19.78■□□□□ 0.76
CTTNBP2-206ENST00000441556 FYCO1Q9BQS8 1478 aa19.78■□□□□ 0.76
CTTNBP2-206ENST00000441556 PRDM2Q13029 1718 aa19.77■□□□□ 0.76
CTTNBP2-206ENST00000441556 MS4A1P11836 297 aa19.77■□□□□ 0.75
CTTNBP2-206ENST00000441556 NCOA2Q15596 1464 aa19.76■□□□□ 0.75
CTTNBP2-206ENST00000441556 POLA1P09884 1462 aaPredicted RBP19.75■□□□□ 0.75
CTTNBP2-206ENST00000441556 EIF5BO60841 1220 aaKnown RBP19.74■□□□□ 0.75
CTTNBP2-206ENST00000441556 EFCAB5A4FU69 1503 aa19.73■□□□□ 0.75
CTTNBP2-206ENST00000441556 CHMP4BQ9H444 224 aaKnown RBP19.72■□□□□ 0.75
CTTNBP2-206ENST00000441556 ZNF644Q9H582 1327 aaPredicted RBP19.72■□□□□ 0.75
CTTNBP2-206ENST00000441556 IFT140Q96RY7 1462 aa19.71■□□□□ 0.75
CTTNBP2-206ENST00000441556 RGS3P49796 1198 aa19.71■□□□□ 0.75
CTTNBP2-206ENST00000441556 OSCARQ8IYS5 282 aa19.71■□□□□ 0.75
CTTNBP2-206ENST00000441556 DNMBPQ6XZF7 1577 aa19.71■□□□□ 0.75
CTTNBP2-206ENST00000441556 UACAQ9BZF9 1416 aa19.7■□□□□ 0.74
CTTNBP2-206ENST00000441556 SOX12O15370 315 aa19.7■□□□□ 0.74
CTTNBP2-206ENST00000441556 RBM19Q9Y4C8 960 aaKnown RBP19.69■□□□□ 0.74
CTTNBP2-206ENST00000441556 ST20-MTHFSA0A0A6YYL1 179 aa19.69■□□□□ 0.74
CTTNBP2-206ENST00000441556 RRBP1Q9P2E9 1410 aaKnown RBP19.69■□□□□ 0.74
CTTNBP2-206ENST00000441556 NUTM2DQ5VT03 806 aaPredicted RBP19.67■□□□□ 0.74
CTTNBP2-206ENST00000441556 NLRP13Q86W25 1043 aa19.67■□□□□ 0.74
CTTNBP2-206ENST00000441556 TSHZ2Q9NRE2 1034 aa19.67■□□□□ 0.74
CTTNBP2-206ENST00000441556 KIF15Q9NS87 1388 aa19.66■□□□□ 0.74
CTTNBP2-206ENST00000441556 CASC1Q6TDU7 716 aa19.65■□□□□ 0.74
CTTNBP2-206ENST00000441556 USP47Q96K76 1375 aa19.65■□□□□ 0.74
CTTNBP2-206ENST00000441556 U2AF1L5P0DN76 240 aaPredicted RBP19.65■□□□□ 0.74
CTTNBP2-206ENST00000441556 U2AF1Q01081 240 aaKnown RBP eCLIP19.65■□□□□ 0.74
CTTNBP2-206ENST00000441556 ERICH6BQ5W0A0 696 aa19.64■□□□□ 0.74
CTTNBP2-206ENST00000441556 RCAN3Q9UKA8 241 aa19.64■□□□□ 0.74
CTTNBP2-206ENST00000441556 TERF2IPQ9NYB0 399 aa19.62■□□□□ 0.73
CTTNBP2-206ENST00000441556 NOP58Q9Y2X3 529 aaKnown RBP19.62■□□□□ 0.73
CTTNBP2-206ENST00000441556 TRAK1Q9UPV9 953 aa19.61■□□□□ 0.73
CTTNBP2-206ENST00000441556 ARXQ96QS3 562 aa19.61■□□□□ 0.73
CTTNBP2-206ENST00000441556 EHBP1L1Q8N3D4 1523 aa19.6■□□□□ 0.73
CTTNBP2-206ENST00000441556 CYB5RLQ6IPT4 315 aa19.6■□□□□ 0.73
CTTNBP2-206ENST00000441556 ANKRD50Q9ULJ7 1429 aa19.6■□□□□ 0.73
CTTNBP2-206ENST00000441556 MYBBP1AQ9BQG0 1328 aaKnown RBP19.59■□□□□ 0.73
CTTNBP2-206ENST00000441556 SYNJ2O15056 1496 aa19.58■□□□□ 0.73
CTTNBP2-206ENST00000441556 PRG4Q92954 1404 aaPredicted RBP19.58■□□□□ 0.73
CTTNBP2-206ENST00000441556 PANK3Q9H999 370 aa19.58■□□□□ 0.72
CTTNBP2-206ENST00000441556 SNAPC4Q5SXM2 1469 aa19.58■□□□□ 0.72
CTTNBP2-206ENST00000441556 TIAM1Q13009 1591 aa19.57■□□□□ 0.72
CTTNBP2-206ENST00000441556 PEG3Q9GZU2 1588 aa19.57■□□□□ 0.72
CTTNBP2-206ENST00000441556 RTF1Q92541 710 aaKnown RBP19.57■□□□□ 0.72
CTTNBP2-206ENST00000441556 PRKRIP1Q9H875 184 aaPredicted RBP19.56■□□□□ 0.72
CTTNBP2-206ENST00000441556 EID1Q9Y6B2 187 aa19.56■□□□□ 0.72
CTTNBP2-206ENST00000441556 ABCA10Q8WWZ4 1543 aa19.56■□□□□ 0.72
CTTNBP2-206ENST00000441556 CALD1Q05682 793 aaKnown RBP19.55■□□□□ 0.72
CTTNBP2-206ENST00000441556 VGFO15240 615 aaPredicted RBP19.55■□□□□ 0.72
CTTNBP2-206ENST00000441556 HECW1Q76N89 1606 aa19.54■□□□□ 0.72
CTTNBP2-206ENST00000441556 LAMC3Q9Y6N6 1575 aa19.54■□□□□ 0.72
CTTNBP2-206ENST00000441556 PDE3BQ13370 1112 aa19.53■□□□□ 0.72
CTTNBP2-206ENST00000441556 ARHGAP5Q13017 1502 aa19.53■□□□□ 0.72
CTTNBP2-206ENST00000441556 GOLGA2Q08379 1002 aa19.53■□□□□ 0.72
CTTNBP2-206ENST00000441556 GOLGA6L22H0YM25 854 aa19.53■□□□□ 0.72
CTTNBP2-206ENST00000441556 IPO8O15397 1037 aaKnown RBP19.53■□□□□ 0.72
CTTNBP2-206ENST00000441556 PAK3O75914 559 aaPredicted RBP19.53■□□□□ 0.72
CTTNBP2-206ENST00000441556 CCDC146Q8IYE0 955 aa19.52■□□□□ 0.72
CTTNBP2-206ENST00000441556 MIA2Q96PC5 1412 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms