RNA–Protein interactions for RNA: ENST00000441439.6

LMO3-208, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-208ENST00000441439 NOP58Q9Y2X3 529 aaKnown RBP10.84□□□□□ -0.67
LMO3-208ENST00000441439 FGD6Q6ZV73 1430 aa10.84□□□□□ -0.67
LMO3-208ENST00000441439 CDC42BPAQ5VT25 1732 aa10.84□□□□□ -0.67
LMO3-208ENST00000441439 CLASP1Q7Z460 1538 aa10.84□□□□□ -0.67
LMO3-208ENST00000441439 MAST1Q9Y2H9 1570 aa10.83□□□□□ -0.68
LMO3-208ENST00000441439 TONSLQ96HA7 1378 aa10.83□□□□□ -0.68
LMO3-208ENST00000441439 EPRSP07814 1512 aaKnown RBP10.83□□□□□ -0.68
LMO3-208ENST00000441439 KDM5DQ9BY66 1539 aa10.83□□□□□ -0.68
LMO3-208ENST00000441439 NCOA1Q15788 1441 aa10.83□□□□□ -0.68
LMO3-208ENST00000441439 SMG6Q86US8 1419 aaKnown RBP10.83□□□□□ -0.68
LMO3-208ENST00000441439 CHD1O14646 1710 aa10.82□□□□□ -0.68
LMO3-208ENST00000441439 ZNF608Q9ULD9 1512 aaPredicted RBP10.82□□□□□ -0.68
LMO3-208ENST00000441439 ADGRL2O95490 1459 aa10.81□□□□□ -0.68
LMO3-208ENST00000441439 NAIPQ13075 1403 aa10.81□□□□□ -0.68
LMO3-208ENST00000441439 ARHGEF5Q12774 1597 aa10.8□□□□□ -0.68
LMO3-208ENST00000441439 WASHC2AQ641Q2 1341 aa10.8□□□□□ -0.68
LMO3-208ENST00000441439 NUP153P49790 1475 aaKnown RBP10.79□□□□□ -0.68
LMO3-208ENST00000441439 DENND4BO75064 1496 aaPredicted RBP10.79□□□□□ -0.68
LMO3-208ENST00000441439 HNRNPUQ00839 825 aaKnown RBP eCLIP10.79□□□□□ -0.68
LMO3-208ENST00000441439 MYOM3Q5VTT5 1437 aa10.78□□□□□ -0.68
LMO3-208ENST00000441439 FHOD3Q2V2M9 1422 aa10.77□□□□□ -0.68
LMO3-208ENST00000441439 C11orf95C9JLR9 678 aaPredicted RBP10.77□□□□□ -0.69
LMO3-208ENST00000441439 SHANK2Q9UPX8 1470 aa10.77□□□□□ -0.69
LMO3-208ENST00000441439 PREX2Q70Z35 1606 aa10.77□□□□□ -0.69
LMO3-208ENST00000441439 PTPRKQ15262 1439 aa10.76□□□□□ -0.69
LMO3-208ENST00000441439 IPO9Q96P70 1041 aaKnown RBP10.76□□□□□ -0.69
LMO3-208ENST00000441439 USP35Q9P2H5 1018 aa10.76□□□□□ -0.69
LMO3-208ENST00000441439 ABCC10Q5T3U5 1492 aa10.76□□□□□ -0.69
LMO3-208ENST00000441439 ROCK1Q13464 1354 aa10.75□□□□□ -0.69
LMO3-208ENST00000441439 SPATA31E1Q6ZUB1 1445 aa10.75□□□□□ -0.69
LMO3-208ENST00000441439 ARAP3Q8WWN8 1544 aa10.75□□□□□ -0.69
LMO3-208ENST00000441439 WASHC2CQ9Y4E1 1318 aa10.73□□□□□ -0.69
LMO3-208ENST00000441439 CDC42BPBQ9Y5S2 1711 aa10.73□□□□□ -0.69
LMO3-208ENST00000441439 CCDC7Q96M83 1385 aa10.73□□□□□ -0.69
LMO3-208ENST00000441439 UHRF1BP1LA0JNW5 1464 aa10.73□□□□□ -0.69
LMO3-208ENST00000441439 BCORL1Q5H9F3 1711 aa10.73□□□□□ -0.69
LMO3-208ENST00000441439 DNAJC5BQ9UF47 199 aa10.72□□□□□ -0.69
LMO3-208ENST00000441439 PLXNC1O60486 1568 aa10.72□□□□□ -0.69
LMO3-208ENST00000441439 PRKRIP1Q9H875 184 aaPredicted RBP10.72□□□□□ -0.69
LMO3-208ENST00000441439 PAK3O75914 559 aaPredicted RBP10.71□□□□□ -0.69
LMO3-208ENST00000441439 TEX14Q8IWB6 1497 aa10.71□□□□□ -0.7
LMO3-208ENST00000441439 RANGAP1P46060 587 aaPredicted RBP10.71□□□□□ -0.7
LMO3-208ENST00000441439 NEURL4Q96JN8 1562 aa10.71□□□□□ -0.7
LMO3-208ENST00000441439 UNC13BO14795 1591 aa10.7□□□□□ -0.7
LMO3-208ENST00000441439 TDRD9Q8NDG6 1382 aaKnown RBP10.7□□□□□ -0.7
LMO3-208ENST00000441439 KDM6BO15054 1643 aa10.69□□□□□ -0.7
LMO3-208ENST00000441439 HSPA5P11021 654 aaKnown RBP10.68□□□□□ -0.7
LMO3-208ENST00000441439 RPRD2Q5VT52 1461 aaKnown RBP10.68□□□□□ -0.7
LMO3-208ENST00000441439 LAMC1P11047 1609 aa10.68□□□□□ -0.7
LMO3-208ENST00000441439 ANP32AP39687 249 aaKnown RBP10.68□□□□□ -0.7
LMO3-208ENST00000441439 FAM50AQ14320 339 aaKnown RBP10.68□□□□□ -0.7
LMO3-208ENST00000441439 E9PCH4 1651 aa10.68□□□□□ -0.7
LMO3-208ENST00000441439 KIF14Q15058 1648 aa10.68□□□□□ -0.7
LMO3-208ENST00000441439 ZMYM4Q5VZL5 1548 aa10.68□□□□□ -0.7
LMO3-208ENST00000441439 MBD5Q9P267 1494 aa10.68□□□□□ -0.7
LMO3-208ENST00000441439 MAGI2Q86UL8 1455 aa10.67□□□□□ -0.7
LMO3-208ENST00000441439 EIF4G2P78344 907 aaKnown RBP eCLIP10.67□□□□□ -0.7
LMO3-208ENST00000441439 ARID4BQ4LE39 1312 aaPredicted RBP10.66□□□□□ -0.7
LMO3-208ENST00000441439 B4GALNT3Q6L9W6 998 aa10.66□□□□□ -0.7
LMO3-208ENST00000441439 DEPDC5O75140 1603 aa10.66□□□□□ -0.7
LMO3-208ENST00000441439 IRX6P78412 446 aaPredicted RBP10.66□□□□□ -0.7
LMO3-208ENST00000441439 UBE2Q2Q8WVN8 375 aa10.66□□□□□ -0.7
LMO3-208ENST00000441439 HIRIP3Q9BW71 556 aaPredicted RBP10.66□□□□□ -0.7
LMO3-208ENST00000441439 NUDCQ9Y266 331 aa10.66□□□□□ -0.7
LMO3-208ENST00000441439 DHX29Q7Z478 1369 aaKnown RBP10.65□□□□□ -0.7
LMO3-208ENST00000441439 RTL5Q5HYW3 569 aaPredicted RBP10.65□□□□□ -0.7
LMO3-208ENST00000441439 ANO8Q9HCE9 1232 aaPredicted RBP10.65□□□□□ -0.7
LMO3-208ENST00000441439 INSRP06213 1382 aa10.64□□□□□ -0.71
LMO3-208ENST00000441439 ZBTB47Q9UFB7 747 aaPredicted RBP10.64□□□□□ -0.71
LMO3-208ENST00000441439 CDK13Q14004 1512 aaKnown RBP10.64□□□□□ -0.71
LMO3-208ENST00000441439 MYO5CQ9NQX4 1742 aa10.64□□□□□ -0.71
LMO3-208ENST00000441439 MS4A1P11836 297 aa10.63□□□□□ -0.71
LMO3-208ENST00000441439 KTN1Q86UP2 1357 aaKnown RBP10.63□□□□□ -0.71
LMO3-208ENST00000441439 KDM5CP41229 1560 aa10.63□□□□□ -0.71
LMO3-208ENST00000441439 PTPRGP23470 1445 aa10.63□□□□□ -0.71
LMO3-208ENST00000441439 CCDC184Q52MB2 194 aa10.63□□□□□ -0.71
LMO3-208ENST00000441439 TROQ12816 1431 aaPredicted RBP10.63□□□□□ -0.71
LMO3-208ENST00000441439 LRPPRCP42704 1394 aaKnown RBP10.62□□□□□ -0.71
LMO3-208ENST00000441439 TCERG1O14776 1098 aaKnown RBP10.61□□□□□ -0.71
LMO3-208ENST00000441439 ABCA9Q8IUA7 1624 aa10.61□□□□□ -0.71
LMO3-208ENST00000441439 ABCC2Q92887 1545 aa10.61□□□□□ -0.71
LMO3-208ENST00000441439 IQGAP3Q86VI3 1631 aa10.6□□□□□ -0.71
LMO3-208ENST00000441439 ANKRD30BQ9BXX2 1392 aa10.6□□□□□ -0.71
LMO3-208ENST00000441439 SALL2Q9Y467 1007 aaPredicted RBP10.6□□□□□ -0.71
LMO3-208ENST00000441439 SAMD9LQ8IVG5 1584 aa10.6□□□□□ -0.71
LMO3-208ENST00000441439 PPM1GO15355 546 aaPredicted RBP10.6□□□□□ -0.71
LMO3-208ENST00000441439 CCDC136Q96JN2 1154 aa10.6□□□□□ -0.71
LMO3-208ENST00000441439 GPATCH8Q9UKJ3 1502 aaKnown RBP10.6□□□□□ -0.71
LMO3-208ENST00000441439 DAPK1P53355 1430 aa10.59□□□□□ -0.71
LMO3-208ENST00000441439 ZCCHC11Q5TAX3 1644 aaKnown RBP10.59□□□□□ -0.71
LMO3-208ENST00000441439 NBR1Q14596 966 aa10.59□□□□□ -0.71
LMO3-208ENST00000441439 MRS2Q9HD23 443 aa10.59□□□□□ -0.71
LMO3-208ENST00000441439 VIRMAQ69YN4 1812 aaKnown RBP10.59□□□□□ -0.71
LMO3-208ENST00000441439 ERCC6Q03468 1493 aa10.58□□□□□ -0.72
LMO3-208ENST00000441439 WDR7Q9Y4E6 1490 aa10.58□□□□□ -0.72
LMO3-208ENST00000441439 EIF2AK4Q9P2K8 1649 aaKnown RBP10.58□□□□□ -0.72
LMO3-208ENST00000441439 ROCK2O75116 1388 aaKnown RBP10.58□□□□□ -0.72
LMO3-208ENST00000441439 MTUS2Q5JR59 1369 aa10.58□□□□□ -0.72
LMO3-208ENST00000441439 KIF7Q2M1P5 1343 aa10.58□□□□□ -0.72
LMO3-208ENST00000441439 CAMSAP2Q08AD1 1489 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms