RNA–Protein interactions for RNA: ENST00000440472.6

SPIRE1-204, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 1 (best)

Gene SPIRE1, Length 2,109 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-204ENST00000440472 KDM5BQ9UGL1 1544 aa11.77□□□□□ -0.53
SPIRE1-204ENST00000440472 ABCC10Q5T3U5 1492 aa11.76□□□□□ -0.53
SPIRE1-204ENST00000440472 PRG4Q92954 1404 aaPredicted RBP11.76□□□□□ -0.53
SPIRE1-204ENST00000440472 TONSLQ96HA7 1378 aa11.76□□□□□ -0.53
SPIRE1-204ENST00000440472 CROCC2H7BZ55 1655 aa11.76□□□□□ -0.53
SPIRE1-204ENST00000440472 CAMSAP2Q08AD1 1489 aa11.75□□□□□ -0.53
SPIRE1-204ENST00000440472 SHANK2Q9UPX8 1470 aa11.75□□□□□ -0.53
SPIRE1-204ENST00000440472 ATP10BO94823 1461 aa11.75□□□□□ -0.53
SPIRE1-204ENST00000440472 KDM6BO15054 1643 aa11.75□□□□□ -0.53
SPIRE1-204ENST00000440472 KIF14Q15058 1648 aa11.75□□□□□ -0.53
SPIRE1-204ENST00000440472 TRHP20396 242 aaPredicted RBP11.73□□□□□ -0.53
SPIRE1-204ENST00000440472 NCOA1Q15788 1441 aa11.72□□□□□ -0.53
SPIRE1-204ENST00000440472 RRP7BPQ9NSQ0 103 aa11.72□□□□□ -0.53
SPIRE1-204ENST00000440472 CDC42BPAQ5VT25 1732 aa11.72□□□□□ -0.53
SPIRE1-204ENST00000440472 ARHGEF5Q12774 1597 aa11.71□□□□□ -0.53
SPIRE1-204ENST00000440472 CHD1O14646 1710 aa11.71□□□□□ -0.54
SPIRE1-204ENST00000440472 PLEKHD1A6NEE1 506 aa11.71□□□□□ -0.54
SPIRE1-204ENST00000440472 MPHOSPH9Q99550 1183 aa11.71□□□□□ -0.54
SPIRE1-204ENST00000440472 PTPRGP23470 1445 aa11.7□□□□□ -0.54
SPIRE1-204ENST00000440472 ANKRD30BQ9BXX2 1392 aa11.7□□□□□ -0.54
SPIRE1-204ENST00000440472 FBLN2P98095 1184 aa11.7□□□□□ -0.54
SPIRE1-204ENST00000440472 CFDP1Q9UEE9 299 aaPredicted RBP11.7□□□□□ -0.54
SPIRE1-204ENST00000440472 CHIC2Q9UKJ5 165 aa11.69□□□□□ -0.54
SPIRE1-204ENST00000440472 RPRD2Q5VT52 1461 aaKnown RBP11.69□□□□□ -0.54
SPIRE1-204ENST00000440472 KDM5DQ9BY66 1539 aa11.67□□□□□ -0.54
SPIRE1-204ENST00000440472 ANKRD30AQ9BXX3 1397 aa11.67□□□□□ -0.54
SPIRE1-204ENST00000440472 ZNF644Q9H582 1327 aaPredicted RBP11.66□□□□□ -0.54
SPIRE1-204ENST00000440472 PZPP20742 1482 aa11.66□□□□□ -0.54
SPIRE1-204ENST00000440472 RSPH4AQ5TD94 716 aa11.66□□□□□ -0.54
SPIRE1-204ENST00000440472 TRIM52Q96A61 297 aa11.65□□□□□ -0.54
SPIRE1-204ENST00000440472 PREX2Q70Z35 1606 aa11.65□□□□□ -0.54
SPIRE1-204ENST00000440472 ARID3CA6NKF2 412 aa11.65□□□□□ -0.55
SPIRE1-204ENST00000440472 GTF3C3Q9Y5Q9 886 aa11.65□□□□□ -0.55
SPIRE1-204ENST00000440472 UHRF1BP1LA0JNW5 1464 aa11.64□□□□□ -0.55
SPIRE1-204ENST00000440472 CLASP1Q7Z460 1538 aa11.64□□□□□ -0.55
SPIRE1-204ENST00000440472 ABCC2Q92887 1545 aa11.64□□□□□ -0.55
SPIRE1-204ENST00000440472 CCER2I3L3R5 266 aa11.63□□□□□ -0.55
SPIRE1-204ENST00000440472 TEX14Q8IWB6 1497 aa11.63□□□□□ -0.55
SPIRE1-204ENST00000440472 MAST1Q9Y2H9 1570 aa11.63□□□□□ -0.55
SPIRE1-204ENST00000440472 MBD5Q9P267 1494 aa11.63□□□□□ -0.55
SPIRE1-204ENST00000440472 RIMBP3CA6NJZ7 1639 aa11.62□□□□□ -0.55
SPIRE1-204ENST00000440472 RIMBP3BA6NNM3 1639 aa11.62□□□□□ -0.55
SPIRE1-204ENST00000440472 RIMBP3Q9UFD9 1639 aa11.62□□□□□ -0.55
SPIRE1-204ENST00000440472 C9orf84Q5VXU9 1444 aa11.62□□□□□ -0.55
SPIRE1-204ENST00000440472 KIAA1107Q9UPP5 1409 aa11.62□□□□□ -0.55
SPIRE1-204ENST00000440472 ANKRD50Q9ULJ7 1429 aa11.61□□□□□ -0.55
SPIRE1-204ENST00000440472 PLEKHH2Q8IVE3 1493 aa11.61□□□□□ -0.55
SPIRE1-204ENST00000440472 CDC42BPBQ9Y5S2 1711 aa11.61□□□□□ -0.55
SPIRE1-204ENST00000440472 SOCS7O14512 581 aa11.6□□□□□ -0.55
SPIRE1-204ENST00000440472 LMTK3Q96Q04 1460 aa11.6□□□□□ -0.55
SPIRE1-204ENST00000440472 CCDC141Q6ZP82 1450 aa11.6□□□□□ -0.55
SPIRE1-204ENST00000440472 SAMD9LQ8IVG5 1584 aa11.59□□□□□ -0.55
SPIRE1-204ENST00000440472 YTHDC1Q96MU7 727 aaKnown RBP11.59□□□□□ -0.55
SPIRE1-204ENST00000440472 SLC4A1APQ9BWU0 796 aaKnown RBP11.59□□□□□ -0.55
SPIRE1-204ENST00000440472 DDX10Q13206 875 aaKnown RBP11.58□□□□□ -0.56
SPIRE1-204ENST00000440472 OSCARQ8IYS5 282 aa11.58□□□□□ -0.56
SPIRE1-204ENST00000440472 L3MBTL2Q969R5 705 aa11.57□□□□□ -0.56
SPIRE1-204ENST00000440472 TSPY4P0CV99 314 aa11.57□□□□□ -0.56
SPIRE1-204ENST00000440472 TSPY10P0CW01 314 aa11.57□□□□□ -0.56
SPIRE1-204ENST00000440472 PELP1Q8IZL8 1130 aaKnown RBP11.57□□□□□ -0.56
SPIRE1-204ENST00000440472 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.56□□□□□ -0.56
SPIRE1-204ENST00000440472 ARAP3Q8WWN8 1544 aa11.56□□□□□ -0.56
SPIRE1-204ENST00000440472 PLXNC1O60486 1568 aa11.56□□□□□ -0.56
SPIRE1-204ENST00000440472 ARHGEF12Q9NZN5 1544 aa11.56□□□□□ -0.56
SPIRE1-204ENST00000440472 POLR1AO95602 1720 aaPredicted RBP11.56□□□□□ -0.56
SPIRE1-204ENST00000440472 EIF4G2P78344 907 aaKnown RBP eCLIP11.56□□□□□ -0.56
SPIRE1-204ENST00000440472 UHRF1BP1Q6BDS2 1440 aa11.55□□□□□ -0.56
SPIRE1-204ENST00000440472 SPATA31E1Q6ZUB1 1445 aa11.55□□□□□ -0.56
SPIRE1-204ENST00000440472 MYO5CQ9NQX4 1742 aa11.55□□□□□ -0.56
SPIRE1-204ENST00000440472 ANP32CO43423 234 aa11.54□□□□□ -0.56
SPIRE1-204ENST00000440472 KIF15Q9NS87 1388 aa11.54□□□□□ -0.56
SPIRE1-204ENST00000440472 TTC37Q6PGP7 1564 aa11.54□□□□□ -0.56
SPIRE1-204ENST00000440472 HSPA5P11021 654 aaKnown RBP11.53□□□□□ -0.56
SPIRE1-204ENST00000440472 ZNF777Q9ULD5 760 aaPredicted RBP11.53□□□□□ -0.56
SPIRE1-204ENST00000440472 UNC13BO14795 1591 aa11.53□□□□□ -0.56
SPIRE1-204ENST00000440472 ERCC6L2Q5T890 1561 aa11.53□□□□□ -0.56
SPIRE1-204ENST00000440472 ZCCHC11Q5TAX3 1644 aaKnown RBP11.52□□□□□ -0.57
SPIRE1-204ENST00000440472 PLCH2O75038 1416 aa11.52□□□□□ -0.57
SPIRE1-204ENST00000440472 ARHGAP5Q13017 1502 aa11.5□□□□□ -0.57
SPIRE1-204ENST00000440472 ARID4BQ4LE39 1312 aaPredicted RBP11.5□□□□□ -0.57
SPIRE1-204ENST00000440472 NUP155O75694 1391 aa11.5□□□□□ -0.57
SPIRE1-204ENST00000440472 PKD2Q13563 968 aa11.5□□□□□ -0.57
SPIRE1-204ENST00000440472 FOXD1Q16676 465 aa11.5□□□□□ -0.57
SPIRE1-204ENST00000440472 NBPF8Q3BBV2 869 aa11.5□□□□□ -0.57
SPIRE1-204ENST00000440472 WASHC2AQ641Q2 1341 aa11.5□□□□□ -0.57
SPIRE1-204ENST00000440472 CNTLNQ9NXG0 1405 aa11.49□□□□□ -0.57
SPIRE1-204ENST00000440472 MAGI2Q86UL8 1455 aa11.49□□□□□ -0.57
SPIRE1-204ENST00000440472 SYCP2Q9BX26 1530 aa11.49□□□□□ -0.57
SPIRE1-204ENST00000440472 DUOX2Q9NRD8 1548 aa11.49□□□□□ -0.57
SPIRE1-204ENST00000440472 CCDC7Q96M83 1385 aa11.48□□□□□ -0.57
SPIRE1-204ENST00000440472 RALGAPBQ86X10 1494 aa11.48□□□□□ -0.57
SPIRE1-204ENST00000440472 HNRNPMP52272 730 aaKnown RBP eCLIP11.48□□□□□ -0.57
SPIRE1-204ENST00000440472 ERBINQ96RT1 1412 aa11.48□□□□□ -0.57
SPIRE1-204ENST00000440472 ATP10AO60312 1499 aa11.48□□□□□ -0.57
SPIRE1-204ENST00000440472 FAM135AQ9P2D6 1515 aa11.48□□□□□ -0.57
SPIRE1-204ENST00000440472 IQGAP3Q86VI3 1631 aa11.48□□□□□ -0.57
SPIRE1-204ENST00000440472 ABCC1P33527 1531 aa11.47□□□□□ -0.57
SPIRE1-204ENST00000440472 RTEL1-TNFRSF6BF6WH68 1400 aa11.47□□□□□ -0.57
SPIRE1-204ENST00000440472 HIRIP3Q9BW71 556 aaPredicted RBP11.46□□□□□ -0.57
SPIRE1-204ENST00000440472 KDM5CP41229 1560 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 340.7 ms