RNA–Protein interactions for RNA: ENST00000440111.6

TSC1-203, Transcript of TSC complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSC1, Length 8,463 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-203ENST00000440111 A0A0G2JS52 829 aa9.72□□□□□ -0.85
TSC1-203ENST00000440111 ANO8Q9HCE9 1232 aaPredicted RBP9.72□□□□□ -0.85
TSC1-203ENST00000440111 ANKRD30AQ9BXX3 1397 aa9.72□□□□□ -0.85
TSC1-203ENST00000440111 KANK4Q5T7N3 995 aaPredicted RBP9.71□□□□□ -0.85
TSC1-203ENST00000440111 DDRGK1Q96HY6 314 aa9.71□□□□□ -0.85
TSC1-203ENST00000440111 IFT140Q96RY7 1462 aa9.71□□□□□ -0.85
TSC1-203ENST00000440111 PNNQ9H307 717 aaKnown RBP9.71□□□□□ -0.86
TSC1-203ENST00000440111 TOPBP1Q92547 1522 aa9.71□□□□□ -0.86
TSC1-203ENST00000440111 NCBP3Q53F19 620 aaKnown RBP9.7□□□□□ -0.86
TSC1-203ENST00000440111 WDR97A6NE52 1622 aa9.7□□□□□ -0.86
TSC1-203ENST00000440111 ROCK1Q13464 1354 aa9.7□□□□□ -0.86
TSC1-203ENST00000440111 NPM1P06748 294 aaKnown RBP eCLIP9.7□□□□□ -0.86
TSC1-203ENST00000440111 TULP1O00294 542 aaPredicted RBP9.7□□□□□ -0.86
TSC1-203ENST00000440111 GRIN2BQ13224 1484 aa9.7□□□□□ -0.86
TSC1-203ENST00000440111 FHOD3Q2V2M9 1422 aa9.69□□□□□ -0.86
TSC1-203ENST00000440111 HECW1Q76N89 1606 aa9.69□□□□□ -0.86
TSC1-203ENST00000440111 CCDC34Q96HJ3 373 aa9.69□□□□□ -0.86
TSC1-203ENST00000440111 CHMP7Q8WUX9 453 aaPredicted RBP9.68□□□□□ -0.86
TSC1-203ENST00000440111 CFDP1Q9UEE9 299 aaPredicted RBP9.68□□□□□ -0.86
TSC1-203ENST00000440111 P3H3Q8IVL6 736 aa9.67□□□□□ -0.86
TSC1-203ENST00000440111 CFAP44Q96MT7 982 aa9.67□□□□□ -0.86
TSC1-203ENST00000440111 POLA1P09884 1462 aaPredicted RBP9.67□□□□□ -0.86
TSC1-203ENST00000440111 HAP1P54257 671 aaPredicted RBP9.67□□□□□ -0.86
TSC1-203ENST00000440111 PODXL2Q9NZ53 605 aa9.67□□□□□ -0.86
TSC1-203ENST00000440111 TMX4Q9H1E5 349 aaPredicted RBP9.67□□□□□ -0.86
TSC1-203ENST00000440111 PHLDB1Q86UU1 1377 aa9.66□□□□□ -0.86
TSC1-203ENST00000440111 MRC2Q9UBG0 1479 aa9.66□□□□□ -0.86
TSC1-203ENST00000440111 NCOA2Q15596 1464 aa9.65□□□□□ -0.86
TSC1-203ENST00000440111 APPP05067 770 aa9.65□□□□□ -0.86
TSC1-203ENST00000440111 DDX10Q13206 875 aaKnown RBP9.65□□□□□ -0.86
TSC1-203ENST00000440111 A0A0U1RQG5 324 aaPredicted RBP9.64□□□□□ -0.87
TSC1-203ENST00000440111 GOLGA6L1Q8N7Z2 621 aa9.64□□□□□ -0.87
TSC1-203ENST00000440111 GOLGA6L4A6NEF3 574 aa9.64□□□□□ -0.87
TSC1-203ENST00000440111 WDR43Q15061 677 aaKnown RBP eCLIP9.63□□□□□ -0.87
TSC1-203ENST00000440111 NGEFQ8N5V2 710 aa9.63□□□□□ -0.87
TSC1-203ENST00000440111 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.63□□□□□ -0.87
TSC1-203ENST00000440111 UNC13AQ9UPW8 1703 aa9.63□□□□□ -0.87
TSC1-203ENST00000440111 RALBP1Q15311 655 aa9.62□□□□□ -0.87
TSC1-203ENST00000440111 KIAA0586Q9BVV6 1533 aa9.62□□□□□ -0.87
TSC1-203ENST00000440111 PLEKHH2Q8IVE3 1493 aa9.62□□□□□ -0.87
TSC1-203ENST00000440111 CEP89Q96ST8 783 aa9.62□□□□□ -0.87
TSC1-203ENST00000440111 PPP4R2Q9NY27 417 aa9.62□□□□□ -0.87
TSC1-203ENST00000440111 SETQ01105 290 aaPredicted RBP9.62□□□□□ -0.87
TSC1-203ENST00000440111 HNRNPUQ00839 825 aaKnown RBP eCLIP9.62□□□□□ -0.87
TSC1-203ENST00000440111 PLPPR3Q6T4P5 718 aa9.61□□□□□ -0.87
TSC1-203ENST00000440111 MRS2Q9HD23 443 aa9.61□□□□□ -0.87
TSC1-203ENST00000440111 PDE3BQ13370 1112 aa9.61□□□□□ -0.87
TSC1-203ENST00000440111 FGD1P98174 961 aa9.61□□□□□ -0.87
TSC1-203ENST00000440111 FKBP8Q14318 412 aa9.6□□□□□ -0.87
TSC1-203ENST00000440111 ERCC6Q03468 1493 aa9.6□□□□□ -0.87
TSC1-203ENST00000440111 TDRD9Q8NDG6 1382 aaKnown RBP9.59□□□□□ -0.87
TSC1-203ENST00000440111 SUPT16HQ9Y5B9 1047 aaKnown RBP9.59□□□□□ -0.87
TSC1-203ENST00000440111 WASHC2AQ641Q2 1341 aa9.59□□□□□ -0.87
TSC1-203ENST00000440111 WASHC2CQ9Y4E1 1318 aa9.59□□□□□ -0.87
TSC1-203ENST00000440111 KIF21AQ7Z4S6 1674 aa9.58□□□□□ -0.88
TSC1-203ENST00000440111 C14orf37Q86TY3 774 aa9.58□□□□□ -0.88
TSC1-203ENST00000440111 TCOF1Q13428 1488 aaKnown RBP9.58□□□□□ -0.88
TSC1-203ENST00000440111 SUPT6HQ7KZ85 1726 aaKnown RBP9.58□□□□□ -0.88
TSC1-203ENST00000440111 EIF3AQ14152 1382 aaKnown RBP9.57□□□□□ -0.88
TSC1-203ENST00000440111 CNTLNQ9NXG0 1405 aa9.57□□□□□ -0.88
TSC1-203ENST00000440111 MPHOSPH9Q99550 1183 aa9.56□□□□□ -0.88
TSC1-203ENST00000440111 MAGI1Q96QZ7 1491 aaPredicted RBP9.56□□□□□ -0.88
TSC1-203ENST00000440111 VSIG10Q8N0Z9 540 aa9.56□□□□□ -0.88
TSC1-203ENST00000440111 CFAP43Q8NDM7 1665 aa9.56□□□□□ -0.88
TSC1-203ENST00000440111 KANK1Q14678 1352 aa9.56□□□□□ -0.88
TSC1-203ENST00000440111 HTATSF1O43719 755 aaKnown RBP9.56□□□□□ -0.88
TSC1-203ENST00000440111 TROQ12816 1431 aaPredicted RBP9.55□□□□□ -0.88
TSC1-203ENST00000440111 TPM4P67936 248 aa9.55□□□□□ -0.88
TSC1-203ENST00000440111 PRDM2Q13029 1718 aa9.55□□□□□ -0.88
TSC1-203ENST00000440111 TMC1Q8TDI8 760 aa9.54□□□□□ -0.88
TSC1-203ENST00000440111 RAD54L2Q9Y4B4 1467 aa9.54□□□□□ -0.88
TSC1-203ENST00000440111 MS4A1P11836 297 aa9.54□□□□□ -0.88
TSC1-203ENST00000440111 IQGAP2Q13576 1575 aa9.54□□□□□ -0.88
TSC1-203ENST00000440111 CHMP4AQ9BY43 222 aa9.54□□□□□ -0.88
TSC1-203ENST00000440111 SCAPERQ9BY12 1400 aa9.54□□□□□ -0.88
TSC1-203ENST00000440111 RRP7BPQ9NSQ0 103 aa9.54□□□□□ -0.88
TSC1-203ENST00000440111 CCDC136Q96JN2 1154 aa9.53□□□□□ -0.88
TSC1-203ENST00000440111 ZBED9Q6R2W3 1325 aa9.53□□□□□ -0.88
TSC1-203ENST00000440111 GNL2Q13823 731 aaKnown RBP9.53□□□□□ -0.88
TSC1-203ENST00000440111 PCF11O94913 1555 aaKnown RBP9.53□□□□□ -0.88
TSC1-203ENST00000440111 ZNF777Q9ULD5 760 aaPredicted RBP9.53□□□□□ -0.88
TSC1-203ENST00000440111 FBLN2P98095 1184 aa9.52□□□□□ -0.88
TSC1-203ENST00000440111 MCCP23508 829 aa9.52□□□□□ -0.88
TSC1-203ENST00000440111 KIF15Q9NS87 1388 aa9.52□□□□□ -0.89
TSC1-203ENST00000440111 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.52□□□□□ -0.89
TSC1-203ENST00000440111 HSPA5P11021 654 aaKnown RBP9.52□□□□□ -0.89
TSC1-203ENST00000440111 CFAP53Q96M91 514 aa9.52□□□□□ -0.89
TSC1-203ENST00000440111 CHIC2Q9UKJ5 165 aa9.52□□□□□ -0.89
TSC1-203ENST00000440111 CHGAP10645 457 aaKnown RBP9.51□□□□□ -0.89
TSC1-203ENST00000440111 EPRSP07814 1512 aaKnown RBP9.51□□□□□ -0.89
TSC1-203ENST00000440111 RRP12Q5JTH9 1297 aaKnown RBP9.51□□□□□ -0.89
TSC1-203ENST00000440111 KCNJ4P48050 445 aa9.51□□□□□ -0.89
TSC1-203ENST00000440111 AAMPQ13685 434 aa9.51□□□□□ -0.89
TSC1-203ENST00000440111 NAIPQ13075 1403 aa9.51□□□□□ -0.89
TSC1-203ENST00000440111 ARID3AQ99856 593 aa9.51□□□□□ -0.89
TSC1-203ENST00000440111 SIN3AQ96ST3 1273 aa9.51□□□□□ -0.89
TSC1-203ENST00000440111 CARD11Q9BXL7 1154 aa9.5□□□□□ -0.89
TSC1-203ENST00000440111 SHANK2Q9UPX8 1470 aa9.5□□□□□ -0.89
TSC1-203ENST00000440111 HMMRO75330 724 aa9.49□□□□□ -0.89
TSC1-203ENST00000440111 UGGT2Q9NYU1 1516 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms