RNA–Protein interactions for RNA: ENST00000439875.1

FAM225B-202, Transcript of family with sequence similarity 225 member B, humanhuman

TSL 1 (best)

Gene FAM225B, Length 7,380 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM225B-202ENST00000439875 NUTM2DQ5VT03 806 aaPredicted RBP13.72□□□□□ -0.21
FAM225B-202ENST00000439875 CCDC18Q5T9S5 1454 aa13.72□□□□□ -0.21
FAM225B-202ENST00000439875 PKD2Q13563 968 aa13.72□□□□□ -0.21
FAM225B-202ENST00000439875 NGDNQ8NEJ9 315 aaKnown RBP13.72□□□□□ -0.21
FAM225B-202ENST00000439875 RAPGEF2Q9Y4G8 1499 aa13.72□□□□□ -0.21
FAM225B-202ENST00000439875 PTPRGP23470 1445 aa13.7□□□□□ -0.22
FAM225B-202ENST00000439875 MYO15BQ96JP2 1530 aa13.7□□□□□ -0.22
FAM225B-202ENST00000439875 SENP3-EIF4A1A0A087X0R7 540 aa13.7□□□□□ -0.22
FAM225B-202ENST00000439875 PHF23Q9BUL5 403 aaPredicted RBP13.69□□□□□ -0.22
FAM225B-202ENST00000439875 NUP155O75694 1391 aa13.69□□□□□ -0.22
FAM225B-202ENST00000439875 EVA1CP58658 441 aa13.69□□□□□ -0.22
FAM225B-202ENST00000439875 SIN3AQ96ST3 1273 aa13.68□□□□□ -0.22
FAM225B-202ENST00000439875 RSPH4AQ5TD94 716 aa13.68□□□□□ -0.22
FAM225B-202ENST00000439875 TAOK2Q9UL54 1235 aa13.68□□□□□ -0.22
FAM225B-202ENST00000439875 G3V3G9 751 aa13.66□□□□□ -0.22
FAM225B-202ENST00000439875 DCAF8Q5TAQ9 597 aa13.66□□□□□ -0.22
FAM225B-202ENST00000439875 CHMP4BQ9H444 224 aaKnown RBP13.66□□□□□ -0.22
FAM225B-202ENST00000439875 ISY1Q9ULR0 285 aaKnown RBP13.66□□□□□ -0.22
FAM225B-202ENST00000439875 ROCK2O75116 1388 aaKnown RBP13.65□□□□□ -0.22
FAM225B-202ENST00000439875 EIF3AQ14152 1382 aaKnown RBP13.65□□□□□ -0.22
FAM225B-202ENST00000439875 NUTM2FA1L443 756 aa13.64□□□□□ -0.23
FAM225B-202ENST00000439875 FHOD3Q2V2M9 1422 aa13.64□□□□□ -0.23
FAM225B-202ENST00000439875 FOXD1Q16676 465 aa13.64□□□□□ -0.23
FAM225B-202ENST00000439875 NCLP19338 710 aaKnown RBP13.64□□□□□ -0.23
FAM225B-202ENST00000439875 FRAT1Q92837 279 aaPredicted RBP13.64□□□□□ -0.23
FAM225B-202ENST00000439875 GAPVD1Q14C86 1478 aa13.63□□□□□ -0.23
FAM225B-202ENST00000439875 IRX6P78412 446 aaPredicted RBP13.63□□□□□ -0.23
FAM225B-202ENST00000439875 EIF5BO60841 1220 aaKnown RBP13.63□□□□□ -0.23
FAM225B-202ENST00000439875 MS4A1P11836 297 aa13.61□□□□□ -0.23
FAM225B-202ENST00000439875 FGD1P98174 961 aa13.61□□□□□ -0.23
FAM225B-202ENST00000439875 NAP1L2Q9ULW6 460 aaPredicted RBP13.61□□□□□ -0.23
FAM225B-202ENST00000439875 SETD5Q9C0A6 1442 aa13.61□□□□□ -0.23
FAM225B-202ENST00000439875 CC2D2AQ9P2K1 1620 aa13.61□□□□□ -0.23
FAM225B-202ENST00000439875 MSH5O43196 834 aa13.61□□□□□ -0.23
FAM225B-202ENST00000439875 KCNJ4P48050 445 aa13.6□□□□□ -0.23
FAM225B-202ENST00000439875 AMPHP49418 695 aa13.6□□□□□ -0.23
FAM225B-202ENST00000439875 ZRSR1Q15695 479 aaKnown RBP13.59□□□□□ -0.23
FAM225B-202ENST00000439875 TERF2IPQ9NYB0 399 aa13.59□□□□□ -0.23
FAM225B-202ENST00000439875 LTV1Q96GA3 475 aaPredicted RBP13.59□□□□□ -0.23
FAM225B-202ENST00000439875 MPHOSPH9Q99550 1183 aa13.57□□□□□ -0.24
FAM225B-202ENST00000439875 DCAF8L1A6NGE4 600 aa13.57□□□□□ -0.24
FAM225B-202ENST00000439875 VPS8Q8N3P4 1428 aa13.56□□□□□ -0.24
FAM225B-202ENST00000439875 BECN1Q14457 450 aa13.55□□□□□ -0.24
FAM225B-202ENST00000439875 TAF7LQ5H9L4 462 aa13.55□□□□□ -0.24
FAM225B-202ENST00000439875 CALD1Q05682 793 aaKnown RBP13.55□□□□□ -0.24
FAM225B-202ENST00000439875 FGD5Q6ZNL6 1462 aa13.55□□□□□ -0.24
FAM225B-202ENST00000439875 ATF3P18847 181 aa13.55□□□□□ -0.24
FAM225B-202ENST00000439875 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.55□□□□□ -0.24
FAM225B-202ENST00000439875 GTF2E1P29083 439 aaPredicted RBP13.54□□□□□ -0.24
FAM225B-202ENST00000439875 CHMP3Q9Y3E7 222 aa13.54□□□□□ -0.24
FAM225B-202ENST00000439875 UACAQ9BZF9 1416 aa13.54□□□□□ -0.24
FAM225B-202ENST00000439875 TPRNQ4KMQ1 711 aa13.53□□□□□ -0.24
FAM225B-202ENST00000439875 KANK4Q5T7N3 995 aaPredicted RBP13.52□□□□□ -0.24
FAM225B-202ENST00000439875 RAD54L2Q9Y4B4 1467 aa13.52□□□□□ -0.25
FAM225B-202ENST00000439875 CHMP4AQ9BY43 222 aa13.52□□□□□ -0.25
FAM225B-202ENST00000439875 TRAK1Q9UPV9 953 aa13.52□□□□□ -0.25
FAM225B-202ENST00000439875 U2AF1L5P0DN76 240 aaPredicted RBP13.51□□□□□ -0.25
FAM225B-202ENST00000439875 U2AF1Q01081 240 aaKnown RBP eCLIP13.51□□□□□ -0.25
FAM225B-202ENST00000439875 PSME1Q06323 249 aa13.51□□□□□ -0.25
FAM225B-202ENST00000439875 CLSTN1O94985 981 aa13.51□□□□□ -0.25
FAM225B-202ENST00000439875 AQRO60306 1485 aaKnown RBP eCLIP13.51□□□□□ -0.25
FAM225B-202ENST00000439875 MRC2Q9UBG0 1479 aa13.51□□□□□ -0.25
FAM225B-202ENST00000439875 KTN1Q86UP2 1357 aaKnown RBP13.5□□□□□ -0.25
FAM225B-202ENST00000439875 MIER1Q8N108 512 aa13.5□□□□□ -0.25
FAM225B-202ENST00000439875 VGFO15240 615 aaPredicted RBP13.5□□□□□ -0.25
FAM225B-202ENST00000439875 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.49□□□□□ -0.25
FAM225B-202ENST00000439875 GORABQ5T7V8 394 aa13.48□□□□□ -0.25
FAM225B-202ENST00000439875 KLHL34Q8N239 644 aa13.48□□□□□ -0.25
FAM225B-202ENST00000439875 GOLGA6L22H0YM25 854 aa13.48□□□□□ -0.25
FAM225B-202ENST00000439875 C1orf141Q5JVX7 400 aa13.48□□□□□ -0.25
FAM225B-202ENST00000439875 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.47□□□□□ -0.25
FAM225B-202ENST00000439875 STK31Q9BXU1 1019 aa13.46□□□□□ -0.25
FAM225B-202ENST00000439875 DDRGK1Q96HY6 314 aa13.46□□□□□ -0.26
FAM225B-202ENST00000439875 SYTL4Q96C24 671 aaPredicted RBP13.45□□□□□ -0.26
FAM225B-202ENST00000439875 HSPA5P11021 654 aaKnown RBP13.45□□□□□ -0.26
FAM225B-202ENST00000439875 ARHGAP5Q13017 1502 aa13.45□□□□□ -0.26
FAM225B-202ENST00000439875 CCDC144AA2RUR9 1427 aa13.45□□□□□ -0.26
FAM225B-202ENST00000439875 GRIN2BQ13224 1484 aa13.44□□□□□ -0.26
FAM225B-202ENST00000439875 FRAT2O75474 233 aaPredicted RBP13.44□□□□□ -0.26
FAM225B-202ENST00000439875 IPO8O15397 1037 aaKnown RBP13.44□□□□□ -0.26
FAM225B-202ENST00000439875 COG3Q96JB2 828 aa13.43□□□□□ -0.26
FAM225B-202ENST00000439875 MCCP23508 829 aa13.42□□□□□ -0.26
FAM225B-202ENST00000439875 APBB1O00213 710 aa13.41□□□□□ -0.26
FAM225B-202ENST00000439875 NCBP3Q53F19 620 aaKnown RBP13.41□□□□□ -0.26
FAM225B-202ENST00000439875 EVC2Q86UK5 1308 aa13.41□□□□□ -0.26
FAM225B-202ENST00000439875 SF3B2Q13435 895 aaKnown RBP13.41□□□□□ -0.26
FAM225B-202ENST00000439875 RAB3GAP2Q9H2M9 1393 aa13.4□□□□□ -0.26
FAM225B-202ENST00000439875 MINK1Q8N4C8 1332 aaPredicted RBP13.4□□□□□ -0.26
FAM225B-202ENST00000439875 LMOD3Q0VAK6 560 aa13.4□□□□□ -0.26
FAM225B-202ENST00000439875 GNL2Q13823 731 aaKnown RBP13.4□□□□□ -0.26
FAM225B-202ENST00000439875 TIMELESSQ9UNS1 1208 aa13.4□□□□□ -0.26
FAM225B-202ENST00000439875 NCAPD3P42695 1498 aa13.4□□□□□ -0.26
FAM225B-202ENST00000439875 IFT140Q96RY7 1462 aa13.4□□□□□ -0.26
FAM225B-202ENST00000439875 RGS3P49796 1198 aa13.39□□□□□ -0.27
FAM225B-202ENST00000439875 NESP48681 1621 aa13.39□□□□□ -0.27
FAM225B-202ENST00000439875 GPATCH3Q96I76 525 aa13.39□□□□□ -0.27
FAM225B-202ENST00000439875 HDAC5Q9UQL6 1122 aa13.39□□□□□ -0.27
FAM225B-202ENST00000439875 PRG4Q92954 1404 aaPredicted RBP13.39□□□□□ -0.27
FAM225B-202ENST00000439875 KIAA1211Q6ZU35 1233 aa13.38□□□□□ -0.27
FAM225B-202ENST00000439875 HSP90AB1P08238 724 aaKnown RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms