RNA–Protein interactions for RNA: ENST00000439875.1

FAM225B-202, Transcript of family with sequence similarity 225 member B, humanhuman

TSL 1 (best)

Gene FAM225B, Length 7,380 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM225B-202ENST00000439875 DCAF8L2P0C7V8 631 aa19.12■□□□□ 0.65
FAM225B-202ENST00000439875 NISCHQ9Y2I1 1504 aa18.02■□□□□ 0.47
FAM225B-202ENST00000439875 SUPT5HO00267 1087 aaKnown RBP17.48■□□□□ 0.39
FAM225B-202ENST00000439875 SHROOM4Q9ULL8 1493 aa17.4■□□□□ 0.38
FAM225B-202ENST00000439875 FAM9AQ8IZU1 332 aaPredicted RBP17.11■□□□□ 0.33
FAM225B-202ENST00000439875 EHMT2Q96KQ7 1210 aa17.1■□□□□ 0.33
FAM225B-202ENST00000439875 APLP2Q06481 763 aa16.85■□□□□ 0.29
FAM225B-202ENST00000439875 ATP1B4Q9UN42 357 aaPredicted RBP16.56■□□□□ 0.24
FAM225B-202ENST00000439875 RANGAP1P46060 587 aaPredicted RBP16.55■□□□□ 0.24
FAM225B-202ENST00000439875 TTBK1Q5TCY1 1321 aaPredicted RBP16.41■□□□□ 0.22
FAM225B-202ENST00000439875 TRIM41Q8WV44 630 aa16.26■□□□□ 0.19
FAM225B-202ENST00000439875 UBTFP17480 764 aaKnown RBP16.21■□□□□ 0.19
FAM225B-202ENST00000439875 MYT1LQ9UL68 1186 aa16.21■□□□□ 0.19
FAM225B-202ENST00000439875 ABCC9O60706 1549 aa16.13■□□□□ 0.17
FAM225B-202ENST00000439875 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.07■□□□□ 0.16
FAM225B-202ENST00000439875 HNRNPUL2Q1KMD3 747 aaKnown RBP16.07■□□□□ 0.16
FAM225B-202ENST00000439875 PELP1Q8IZL8 1130 aaKnown RBP16.01■□□□□ 0.15
FAM225B-202ENST00000439875 PABPN1Q86U42 306 aaKnown RBP eCLIP15.96■□□□□ 0.15
FAM225B-202ENST00000439875 PCGF6Q9BYE7 350 aa15.91■□□□□ 0.14
FAM225B-202ENST00000439875 CHIC1Q5VXU3 224 aa15.84■□□□□ 0.13
FAM225B-202ENST00000439875 CCER1Q8TC90 406 aaPredicted RBP15.77■□□□□ 0.12
FAM225B-202ENST00000439875 FBLN2P98095 1184 aa15.66■□□□□ 0.1
FAM225B-202ENST00000439875 ITGAEP38570 1179 aa15.65■□□□□ 0.1
FAM225B-202ENST00000439875 PPARGC1BQ86YN6 1023 aaKnown RBP15.61■□□□□ 0.09
FAM225B-202ENST00000439875 POLR3GLQ9BT43 218 aa15.56■□□□□ 0.08
FAM225B-202ENST00000439875 SLC4A1APQ9BWU0 796 aaKnown RBP15.55■□□□□ 0.08
FAM225B-202ENST00000439875 ZEB1P37275 1124 aaPredicted RBP15.51■□□□□ 0.07
FAM225B-202ENST00000439875 ERICH6Q7L0X2 663 aa15.37■□□□□ 0.05
FAM225B-202ENST00000439875 FAM50AQ14320 339 aaKnown RBP15.34■□□□□ 0.05
FAM225B-202ENST00000439875 CENPBP07199 599 aaPredicted RBP15.33■□□□□ 0.04
FAM225B-202ENST00000439875 BCANQ96GW7 911 aa15.33■□□□□ 0.04
FAM225B-202ENST00000439875 NEFLP07196 543 aa15.32■□□□□ 0.04
FAM225B-202ENST00000439875 SCRIBQ14160 1630 aa15.31■□□□□ 0.04
FAM225B-202ENST00000439875 CNGB1Q14028 1251 aaPredicted RBP15.3■□□□□ 0.04
FAM225B-202ENST00000439875 TRIM52Q96A61 297 aa15.27■□□□□ 0.04
FAM225B-202ENST00000439875 ESF1Q9H501 851 aaKnown RBP15.23■□□□□ 0.03
FAM225B-202ENST00000439875 NPM1P06748 294 aaKnown RBP eCLIP15.22■□□□□ 0.03
FAM225B-202ENST00000439875 PLPPR3Q6T4P5 718 aa15.2■□□□□ 0.02
FAM225B-202ENST00000439875 YTHDC1Q96MU7 727 aaKnown RBP15.19■□□□□ 0.02
FAM225B-202ENST00000439875 LOC105371045A0A1W2PR82 267 aa15.19■□□□□ 0.02
FAM225B-202ENST00000439875 ARID3CA6NKF2 412 aa15.17■□□□□ 0.02
FAM225B-202ENST00000439875 CCDC180Q9P1Z9 1646 aa15.17■□□□□ 0.02
FAM225B-202ENST00000439875 TRIM26Q12899 539 aaPredicted RBP15.16■□□□□ 0.02
FAM225B-202ENST00000439875 P3H3Q8IVL6 736 aa15.12■□□□□ 0.01
FAM225B-202ENST00000439875 RB1CC1Q8TDY2 1594 aa15.1■□□□□ 0.01
FAM225B-202ENST00000439875 ZNF777Q9ULD5 760 aaPredicted RBP15.06■□□□□ 0
FAM225B-202ENST00000439875 SLC24A1O60721 1099 aa15.05■□□□□ -0
FAM225B-202ENST00000439875 STAG3Q9UJ98 1225 aa15.03■□□□□ -0
FAM225B-202ENST00000439875 ZNF326Q5BKZ1 582 aaKnown RBP15.03■□□□□ -0
FAM225B-202ENST00000439875 CDK11AQ9UQ88 783 aaPredicted RBP15.02■□□□□ -0
FAM225B-202ENST00000439875 NEUROD1Q13562 356 aa15□□□□□ -0.01
FAM225B-202ENST00000439875 DAXXQ9UER7 740 aaPredicted RBP14.99□□□□□ -0.01
FAM225B-202ENST00000439875 CHMP7Q8WUX9 453 aaPredicted RBP14.94□□□□□ -0.02
FAM225B-202ENST00000439875 CHGAP10645 457 aaKnown RBP14.91□□□□□ -0.02
FAM225B-202ENST00000439875 ERCC6Q03468 1493 aa14.89□□□□□ -0.03
FAM225B-202ENST00000439875 NEFMP07197 916 aa14.86□□□□□ -0.03
FAM225B-202ENST00000439875 CLSPNQ9HAW4 1339 aa14.82□□□□□ -0.04
FAM225B-202ENST00000439875 ZBTB47Q9UFB7 747 aaPredicted RBP14.79□□□□□ -0.04
FAM225B-202ENST00000439875 CSRNP3Q8WYN3 585 aa14.79□□□□□ -0.04
FAM225B-202ENST00000439875 ZCCHC6Q5VYS8 1495 aaKnown RBP14.79□□□□□ -0.04
FAM225B-202ENST00000439875 NACADO15069 1562 aa14.78□□□□□ -0.04
FAM225B-202ENST00000439875 SCAF1Q9H7N4 1312 aaKnown RBP14.75□□□□□ -0.05
FAM225B-202ENST00000439875 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.73□□□□□ -0.05
FAM225B-202ENST00000439875 ARID4BQ4LE39 1312 aaPredicted RBP14.72□□□□□ -0.05
FAM225B-202ENST00000439875 TRHP20396 242 aaPredicted RBP14.7□□□□□ -0.06
FAM225B-202ENST00000439875 KCNH8Q96L42 1107 aa14.68□□□□□ -0.06
FAM225B-202ENST00000439875 BCL11AQ9H165 835 aa14.67□□□□□ -0.06
FAM225B-202ENST00000439875 BAZ1BQ9UIG0 1483 aaKnown RBP14.66□□□□□ -0.06
FAM225B-202ENST00000439875 HRCP23327 699 aa14.65□□□□□ -0.06
FAM225B-202ENST00000439875 CANXP27824 592 aaKnown RBP14.65□□□□□ -0.06
FAM225B-202ENST00000439875 ANP32CO43423 234 aa14.63□□□□□ -0.07
FAM225B-202ENST00000439875 A0A0G2JS52 829 aa14.62□□□□□ -0.07
FAM225B-202ENST00000439875 C14orf37Q86TY3 774 aa14.62□□□□□ -0.07
FAM225B-202ENST00000439875 ZNF316A6NFI3 1004 aaPredicted RBP14.61□□□□□ -0.07
FAM225B-202ENST00000439875 TSPY4P0CV99 314 aa14.61□□□□□ -0.07
FAM225B-202ENST00000439875 TSPY10P0CW01 314 aa14.61□□□□□ -0.07
FAM225B-202ENST00000439875 PPP1R15AO75807 674 aaPredicted RBP14.57□□□□□ -0.08
FAM225B-202ENST00000439875 CHIC2Q9UKJ5 165 aa14.55□□□□□ -0.08
FAM225B-202ENST00000439875 PLEKHG5O94827 1062 aa14.54□□□□□ -0.08
FAM225B-202ENST00000439875 SENP3Q9H4L4 574 aaPredicted RBP14.54□□□□□ -0.08
FAM225B-202ENST00000439875 ZBTB7CA1YPR0 619 aa14.54□□□□□ -0.08
FAM225B-202ENST00000439875 HAP1P54257 671 aaPredicted RBP14.53□□□□□ -0.08
FAM225B-202ENST00000439875 MTUS2Q5JR59 1369 aa14.52□□□□□ -0.08
FAM225B-202ENST00000439875 PLEKHD1A6NEE1 506 aa14.52□□□□□ -0.09
FAM225B-202ENST00000439875 DIEXFQ68CQ4 756 aaKnown RBP14.5□□□□□ -0.09
FAM225B-202ENST00000439875 TONSLQ96HA7 1378 aa14.45□□□□□ -0.1
FAM225B-202ENST00000439875 KDM2AQ9Y2K7 1162 aa14.44□□□□□ -0.1
FAM225B-202ENST00000439875 NPM2Q86SE8 214 aaKnown RBP14.41□□□□□ -0.1
FAM225B-202ENST00000439875 MYT1Q01538 1121 aa14.4□□□□□ -0.1
FAM225B-202ENST00000439875 RSF1Q96T23 1441 aaPredicted RBP14.38□□□□□ -0.11
FAM225B-202ENST00000439875 EIF4G1Q04637 1599 aaKnown RBP14.38□□□□□ -0.11
FAM225B-202ENST00000439875 BAZ1AQ9NRL2 1556 aaPredicted RBP14.33□□□□□ -0.12
FAM225B-202ENST00000439875 KIF27Q86VH2 1401 aa14.33□□□□□ -0.12
FAM225B-202ENST00000439875 MLECQ14165 292 aa14.31□□□□□ -0.12
FAM225B-202ENST00000439875 RRP7BPQ9NSQ0 103 aa14.3□□□□□ -0.12
FAM225B-202ENST00000439875 CFDP1Q9UEE9 299 aaPredicted RBP14.3□□□□□ -0.12
FAM225B-202ENST00000439875 WRNQ14191 1432 aaPredicted RBP eCLIP14.28□□□□□ -0.12
FAM225B-202ENST00000439875 LMOD2Q6P5Q4 547 aa14.28□□□□□ -0.12
FAM225B-202ENST00000439875 PDS5BQ9NTI5 1447 aa14.27□□□□□ -0.12
FAM225B-202ENST00000439875 CLIP1P30622 1438 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms