RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 C11orf95C9JLR9 678 aaPredicted RBP13.48□□□□□ -0.25
CDC42SE1-202ENST00000439374 SKAP1Q86WV1 359 aa13.47□□□□□ -0.25
CDC42SE1-202ENST00000439374 CDK13Q14004 1512 aaKnown RBP13.47□□□□□ -0.25
CDC42SE1-202ENST00000439374 TSPY4P0CV99 314 aa13.47□□□□□ -0.25
CDC42SE1-202ENST00000439374 TSPY10P0CW01 314 aa13.47□□□□□ -0.25
CDC42SE1-202ENST00000439374 NBPF8Q3BBV2 869 aa13.47□□□□□ -0.25
CDC42SE1-202ENST00000439374 SENP3Q9H4L4 574 aaPredicted RBP13.46□□□□□ -0.25
CDC42SE1-202ENST00000439374 NAIPQ13075 1403 aa13.46□□□□□ -0.25
CDC42SE1-202ENST00000439374 CCER2I3L3R5 266 aa13.45□□□□□ -0.26
CDC42SE1-202ENST00000439374 HNRNPMP52272 730 aaKnown RBP eCLIP13.45□□□□□ -0.26
CDC42SE1-202ENST00000439374 UACAQ9BZF9 1416 aa13.45□□□□□ -0.26
CDC42SE1-202ENST00000439374 JPH4Q96JJ6 628 aa13.44□□□□□ -0.26
CDC42SE1-202ENST00000439374 SLC4A3P48751 1232 aa13.43□□□□□ -0.26
CDC42SE1-202ENST00000439374 DCAF11Q8TEB1 546 aa13.43□□□□□ -0.26
CDC42SE1-202ENST00000439374 NEFMP07197 916 aa13.42□□□□□ -0.26
CDC42SE1-202ENST00000439374 FANCIQ9NVI1 1328 aa13.42□□□□□ -0.26
CDC42SE1-202ENST00000439374 KIF21AQ7Z4S6 1674 aa13.41□□□□□ -0.26
CDC42SE1-202ENST00000439374 CARD11Q9BXL7 1154 aa13.41□□□□□ -0.26
CDC42SE1-202ENST00000439374 ZNF608Q9ULD9 1512 aaPredicted RBP13.41□□□□□ -0.26
CDC42SE1-202ENST00000439374 HFM1A2PYH4 1435 aa13.41□□□□□ -0.26
CDC42SE1-202ENST00000439374 TMC1Q8TDI8 760 aa13.41□□□□□ -0.26
CDC42SE1-202ENST00000439374 PRG4Q92954 1404 aaPredicted RBP13.38□□□□□ -0.27
CDC42SE1-202ENST00000439374 EFCAB5A4FU69 1503 aa13.37□□□□□ -0.27
CDC42SE1-202ENST00000439374 PRKRIP1Q9H875 184 aaPredicted RBP13.37□□□□□ -0.27
CDC42SE1-202ENST00000439374 MAP3K1Q13233 1512 aa13.37□□□□□ -0.27
CDC42SE1-202ENST00000439374 NUP155O75694 1391 aa13.36□□□□□ -0.27
CDC42SE1-202ENST00000439374 PRDM2Q13029 1718 aa13.36□□□□□ -0.27
CDC42SE1-202ENST00000439374 SNAPC4Q5SXM2 1469 aa13.35□□□□□ -0.27
CDC42SE1-202ENST00000439374 LAMC3Q9Y6N6 1575 aa13.35□□□□□ -0.27
CDC42SE1-202ENST00000439374 DAXXQ9UER7 740 aaPredicted RBP13.34□□□□□ -0.27
CDC42SE1-202ENST00000439374 EPRSP07814 1512 aaKnown RBP13.34□□□□□ -0.27
CDC42SE1-202ENST00000439374 KIF7Q2M1P5 1343 aa13.34□□□□□ -0.27
CDC42SE1-202ENST00000439374 AKNAQ7Z591 1439 aa13.33□□□□□ -0.28
CDC42SE1-202ENST00000439374 ST20-MTHFSA0A0A6YYL1 179 aa13.32□□□□□ -0.28
CDC42SE1-202ENST00000439374 CC2D1BQ5T0F9 858 aaKnown RBP13.32□□□□□ -0.28
CDC42SE1-202ENST00000439374 BRPF3Q9ULD4 1205 aa13.32□□□□□ -0.28
CDC42SE1-202ENST00000439374 GRIN2BQ13224 1484 aa13.3□□□□□ -0.28
CDC42SE1-202ENST00000439374 PLIN1O60240 522 aa13.3□□□□□ -0.28
CDC42SE1-202ENST00000439374 MAGI3Q5TCQ9 1506 aa13.29□□□□□ -0.28
CDC42SE1-202ENST00000439374 PTPN23Q9H3S7 1636 aa13.29□□□□□ -0.28
CDC42SE1-202ENST00000439374 PLB1Q6P1J6 1458 aa13.29□□□□□ -0.28
CDC42SE1-202ENST00000439374 CCDC7Q96M83 1385 aa13.29□□□□□ -0.28
CDC42SE1-202ENST00000439374 THOC2Q8NI27 1593 aaKnown RBP13.29□□□□□ -0.28
CDC42SE1-202ENST00000439374 IPO9Q96P70 1041 aaKnown RBP13.29□□□□□ -0.28
CDC42SE1-202ENST00000439374 CUL7Q14999 1698 aa13.28□□□□□ -0.28
CDC42SE1-202ENST00000439374 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.28□□□□□ -0.28
CDC42SE1-202ENST00000439374 CHGAP10645 457 aaKnown RBP13.27□□□□□ -0.28
CDC42SE1-202ENST00000439374 EHBP1L1Q8N3D4 1523 aa13.26□□□□□ -0.29
CDC42SE1-202ENST00000439374 SUPT6HQ7KZ85 1726 aaKnown RBP13.26□□□□□ -0.29
CDC42SE1-202ENST00000439374 CFAP43Q8NDM7 1665 aa13.26□□□□□ -0.29
CDC42SE1-202ENST00000439374 EXOC6Q8TAG9 804 aa13.25□□□□□ -0.29
CDC42SE1-202ENST00000439374 ABCC5O15440 1437 aa13.25□□□□□ -0.29
CDC42SE1-202ENST00000439374 DAPK1P53355 1430 aa13.24□□□□□ -0.29
CDC42SE1-202ENST00000439374 USP47Q96K76 1375 aa13.24□□□□□ -0.29
CDC42SE1-202ENST00000439374 ANKRD30AQ9BXX3 1397 aa13.24□□□□□ -0.29
CDC42SE1-202ENST00000439374 MRC2Q9UBG0 1479 aa13.24□□□□□ -0.29
CDC42SE1-202ENST00000439374 IQGAP2Q13576 1575 aa13.24□□□□□ -0.29
CDC42SE1-202ENST00000439374 CTTNBP2Q8WZ74 1663 aa13.22□□□□□ -0.29
CDC42SE1-202ENST00000439374 NBPF1Q3BBV0 1214 aa13.22□□□□□ -0.29
CDC42SE1-202ENST00000439374 CARMIL2Q6F5E8 1435 aa13.22□□□□□ -0.29
CDC42SE1-202ENST00000439374 ANKRD30BQ9BXX2 1392 aa13.22□□□□□ -0.29
CDC42SE1-202ENST00000439374 ARID4BQ4LE39 1312 aaPredicted RBP13.22□□□□□ -0.29
CDC42SE1-202ENST00000439374 KDM6BO15054 1643 aa13.22□□□□□ -0.29
CDC42SE1-202ENST00000439374 RGS3P49796 1198 aa13.21□□□□□ -0.29
CDC42SE1-202ENST00000439374 UGGT2Q9NYU1 1516 aa13.2□□□□□ -0.3
CDC42SE1-202ENST00000439374 CNTLNQ9NXG0 1405 aa13.2□□□□□ -0.3
CDC42SE1-202ENST00000439374 ANKRD50Q9ULJ7 1429 aa13.19□□□□□ -0.3
CDC42SE1-202ENST00000439374 ROCK2O75116 1388 aaKnown RBP13.19□□□□□ -0.3
CDC42SE1-202ENST00000439374 MIA2Q96PC5 1412 aa13.17□□□□□ -0.3
CDC42SE1-202ENST00000439374 HECW1Q76N89 1606 aa13.17□□□□□ -0.3
CDC42SE1-202ENST00000439374 PTPRGP23470 1445 aa13.17□□□□□ -0.3
CDC42SE1-202ENST00000439374 KIAA0586Q9BVV6 1533 aa13.16□□□□□ -0.3
CDC42SE1-202ENST00000439374 NUP153P49790 1475 aaKnown RBP13.16□□□□□ -0.3
CDC42SE1-202ENST00000439374 ABCA5Q8WWZ7 1642 aa13.16□□□□□ -0.3
CDC42SE1-202ENST00000439374 KIF15Q9NS87 1388 aa13.15□□□□□ -0.3
CDC42SE1-202ENST00000439374 IFT140Q96RY7 1462 aa13.15□□□□□ -0.3
CDC42SE1-202ENST00000439374 TROQ12816 1431 aaPredicted RBP13.15□□□□□ -0.3
CDC42SE1-202ENST00000439374 PDE4AP27815 886 aa13.15□□□□□ -0.3
CDC42SE1-202ENST00000439374 TNNT2P45379 298 aaPredicted RBP13.15□□□□□ -0.3
CDC42SE1-202ENST00000439374 SPRYD3Q8NCJ5 442 aa13.15□□□□□ -0.3
CDC42SE1-202ENST00000439374 ARHGEF11O15085 1522 aa13.14□□□□□ -0.31
CDC42SE1-202ENST00000439374 GRIN2AQ12879 1464 aa13.14□□□□□ -0.31
CDC42SE1-202ENST00000439374 CDCA7LQ96GN5 454 aa13.14□□□□□ -0.31
CDC42SE1-202ENST00000439374 NUDCQ9Y266 331 aa13.14□□□□□ -0.31
CDC42SE1-202ENST00000439374 NCOA1Q15788 1441 aa13.13□□□□□ -0.31
CDC42SE1-202ENST00000439374 ZBED9Q6R2W3 1325 aa13.13□□□□□ -0.31
CDC42SE1-202ENST00000439374 SAMD9Q5K651 1589 aa13.12□□□□□ -0.31
CDC42SE1-202ENST00000439374 AFAP1Q8N556 730 aa13.11□□□□□ -0.31
CDC42SE1-202ENST00000439374 CAMSAP2Q08AD1 1489 aa13.11□□□□□ -0.31
CDC42SE1-202ENST00000439374 PANK3Q9H999 370 aa13.11□□□□□ -0.31
CDC42SE1-202ENST00000439374 DENND4BO75064 1496 aaPredicted RBP13.1□□□□□ -0.31
CDC42SE1-202ENST00000439374 NUTM2DQ5VT03 806 aaPredicted RBP13.1□□□□□ -0.31
CDC42SE1-202ENST00000439374 DISP1Q96F81 1524 aa13.1□□□□□ -0.31
CDC42SE1-202ENST00000439374 TARBP1Q13395 1621 aaKnown RBP13.1□□□□□ -0.31
CDC42SE1-202ENST00000439374 KIAA1107Q9UPP5 1409 aa13.09□□□□□ -0.31
CDC42SE1-202ENST00000439374 NEUROD2Q15784 382 aa13.09□□□□□ -0.31
CDC42SE1-202ENST00000439374 GPATCH8Q9UKJ3 1502 aaKnown RBP13.09□□□□□ -0.31
CDC42SE1-202ENST00000439374 RPRD2Q5VT52 1461 aaKnown RBP13.09□□□□□ -0.31
CDC42SE1-202ENST00000439374 C9orf84Q5VXU9 1444 aa13.09□□□□□ -0.31
CDC42SE1-202ENST00000439374 SLKQ9H2G2 1235 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms