RNA–Protein interactions for RNA: ENST00000438704.6

HMGB2-202, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,032 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-202ENST00000438704 L3MBTL3Q96JM7 780 aaPredicted RBP12.53□□□□□ -0.4
HMGB2-202ENST00000438704 CUX1P39880 1505 aa12.52□□□□□ -0.4
HMGB2-202ENST00000438704 ILDR1Q86SU0 546 aaPredicted RBP12.52□□□□□ -0.41
HMGB2-202ENST00000438704 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.52□□□□□ -0.416e-9■■■□□ 16.1
HMGB2-202ENST00000438704 FANCD2Q9BXW9 1451 aa12.52□□□□□ -0.41
HMGB2-202ENST00000438704 PDS5BQ9NTI5 1447 aa12.49□□□□□ -0.41
HMGB2-202ENST00000438704 SNPHO15079 494 aa12.48□□□□□ -0.41
HMGB2-202ENST00000438704 C3orf67Q6ZVT6 689 aa12.48□□□□□ -0.41
HMGB2-202ENST00000438704 NESP48681 1621 aa12.48□□□□□ -0.41
HMGB2-202ENST00000438704 ST18O60284 1047 aa12.47□□□□□ -0.41
HMGB2-202ENST00000438704 CABP2Q9NPB3 220 aa12.46□□□□□ -0.41
HMGB2-202ENST00000438704 TMEM121BQ9BXQ6 578 aaPredicted RBP12.45□□□□□ -0.42
HMGB2-202ENST00000438704 SOGA1O94964 1423 aa12.45□□□□□ -0.42
HMGB2-202ENST00000438704 DNMBPQ6XZF7 1577 aa12.44□□□□□ -0.42
HMGB2-202ENST00000438704 CEP164Q9UPV0 1460 aa12.44□□□□□ -0.42
HMGB2-202ENST00000438704 TOPBP1Q92547 1522 aa12.4□□□□□ -0.42
HMGB2-202ENST00000438704 LOC105371045A0A1W2PR82 267 aa12.38□□□□□ -0.43
HMGB2-202ENST00000438704 RUSC2Q8N2Y8 1516 aa12.37□□□□□ -0.43
HMGB2-202ENST00000438704 CDAN1Q8IWY9 1227 aa12.37□□□□□ -0.43
HMGB2-202ENST00000438704 FGD5Q6ZNL6 1462 aa12.37□□□□□ -0.43
HMGB2-202ENST00000438704 URB2Q14146 1524 aaKnown RBP12.37□□□□□ -0.43
HMGB2-202ENST00000438704 KIF21BO75037 1637 aa12.36□□□□□ -0.43
HMGB2-202ENST00000438704 KIF27Q86VH2 1401 aa12.36□□□□□ -0.43
HMGB2-202ENST00000438704 G3V3G9 751 aa12.35□□□□□ -0.43
HMGB2-202ENST00000438704 FAM9AQ8IZU1 332 aaPredicted RBP12.35□□□□□ -0.43
HMGB2-202ENST00000438704 ABCA10Q8WWZ4 1543 aa12.34□□□□□ -0.43
HMGB2-202ENST00000438704 RIOK3O14730 519 aaKnown RBP12.34□□□□□ -0.43
HMGB2-202ENST00000438704 DPY19L2Q6NUT2 758 aa12.34□□□□□ -0.43
HMGB2-202ENST00000438704 BOLA1Q9Y3E2 137 aa12.34□□□□□ -0.43
HMGB2-202ENST00000438704 POLA1P09884 1462 aaPredicted RBP12.34□□□□□ -0.43
HMGB2-202ENST00000438704 KIF21AQ7Z4S6 1674 aa12.33□□□□□ -0.44
HMGB2-202ENST00000438704 GOLGA3Q08378 1498 aa12.32□□□□□ -0.44
HMGB2-202ENST00000438704 PRXQ9BXM0 1461 aa12.32□□□□□ -0.44
HMGB2-202ENST00000438704 MRC2Q9UBG0 1479 aa12.32□□□□□ -0.44
HMGB2-202ENST00000438704 TNIKQ9UKE5 1360 aa12.31□□□□□ -0.44
HMGB2-202ENST00000438704 EFCAB3Q8N7B9 438 aa12.31□□□□□ -0.44
HMGB2-202ENST00000438704 ERICH3Q5RHP9 1530 aa12.31□□□□□ -0.44
HMGB2-202ENST00000438704 VGFO15240 615 aaPredicted RBP12.3□□□□□ -0.44
HMGB2-202ENST00000438704 RNF25Q96BH1 459 aaPredicted RBP12.3□□□□□ -0.44
HMGB2-202ENST00000438704 CUX2O14529 1486 aa12.28□□□□□ -0.44
HMGB2-202ENST00000438704 WDR62O43379 1518 aa12.28□□□□□ -0.44
HMGB2-202ENST00000438704 IGF1RP08069 1367 aa12.26□□□□□ -0.45
HMGB2-202ENST00000438704 WDR97A6NE52 1622 aa12.26□□□□□ -0.45
HMGB2-202ENST00000438704 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.25□□□□□ -0.45
HMGB2-202ENST00000438704 SOX12O15370 315 aa12.25□□□□□ -0.45
HMGB2-202ENST00000438704 ZFP91Q96JP5 570 aaPredicted RBP12.25□□□□□ -0.45
HMGB2-202ENST00000438704 RAD54L2Q9Y4B4 1467 aa12.23□□□□□ -0.45
HMGB2-202ENST00000438704 MARVELD3Q96A59 401 aa12.23□□□□□ -0.45
HMGB2-202ENST00000438704 TAOK2Q9UL54 1235 aa12.23□□□□□ -0.45
HMGB2-202ENST00000438704 TARBP1Q13395 1621 aaKnown RBP12.22□□□□□ -0.45
HMGB2-202ENST00000438704 RAPGEF2Q9Y4G8 1499 aa12.21□□□□□ -0.45
HMGB2-202ENST00000438704 EMP3P54852 163 aa12.21□□□□□ -0.45
HMGB2-202ENST00000438704 ABCA5Q8WWZ7 1642 aa12.21□□□□□ -0.46
HMGB2-202ENST00000438704 THOC2Q8NI27 1593 aaKnown RBP12.21□□□□□ -0.46
HMGB2-202ENST00000438704 IFT140Q96RY7 1462 aa12.2□□□□□ -0.46
HMGB2-202ENST00000438704 ERCC6Q03468 1493 aa12.19□□□□□ -0.46
HMGB2-202ENST00000438704 CEP162Q5TB80 1403 aa12.19□□□□□ -0.46
HMGB2-202ENST00000438704 MICALL2Q8IY33 904 aa12.17□□□□□ -0.46
HMGB2-202ENST00000438704 CARMIL1Q5VZK9 1371 aa12.17□□□□□ -0.46
HMGB2-202ENST00000438704 CUL7Q14999 1698 aa12.16□□□□□ -0.46
HMGB2-202ENST00000438704 HOXB3P14651 431 aaPredicted RBP12.16□□□□□ -0.46
HMGB2-202ENST00000438704 GAPVD1Q14C86 1478 aa12.15□□□□□ -0.46
HMGB2-202ENST00000438704 DOK7Q18PE1 504 aa12.15□□□□□ -0.46
HMGB2-202ENST00000438704 UBTFP17480 764 aaKnown RBP12.14□□□□□ -0.47
HMGB2-202ENST00000438704 MS4A4AQ96JQ5 239 aa12.14□□□□□ -0.47
HMGB2-202ENST00000438704 PHF8Q9UPP1 1060 aa12.13□□□□□ -0.47
HMGB2-202ENST00000438704 HS3ST6Q96QI5 342 aa12.12□□□□□ -0.47
HMGB2-202ENST00000438704 TDRD9Q8NDG6 1382 aaKnown RBP12.11□□□□□ -0.47
HMGB2-202ENST00000438704 ZNF710Q8N1W2 664 aa12.11□□□□□ -0.47
HMGB2-202ENST00000438704 BCL11BQ9C0K0 894 aaPredicted RBP12.11□□□□□ -0.47
HMGB2-202ENST00000438704 HOXB1P14653 301 aaPredicted RBP12.1□□□□□ -0.47
HMGB2-202ENST00000438704 NLRP6P59044 892 aa12.1□□□□□ -0.47
HMGB2-202ENST00000438704 RIMBP2O15034 1052 aa12.09□□□□□ -0.47
HMGB2-202ENST00000438704 CLIP1P30622 1438 aa12.09□□□□□ -0.47
HMGB2-202ENST00000438704 GRIN2BQ13224 1484 aa12.08□□□□□ -0.47
HMGB2-202ENST00000438704 FAM205CA6NFA0 338 aa12.08□□□□□ -0.48
HMGB2-202ENST00000438704 ECM2O94769 699 aaPredicted RBP12.08□□□□□ -0.48
HMGB2-202ENST00000438704 TMEM92Q6UXU6 159 aa12.07□□□□□ -0.48
HMGB2-202ENST00000438704 SPNS2Q8IVW8 549 aa12.07□□□□□ -0.48
HMGB2-202ENST00000438704 FHAD1B1AJZ9 1412 aa12.06□□□□□ -0.48
HMGB2-202ENST00000438704 FBXO22Q8NEZ5 403 aa12.06□□□□□ -0.48
HMGB2-202ENST00000438704 ZSWIM6Q9HCJ5 1215 aa12.06□□□□□ -0.48
HMGB2-202ENST00000438704 STK24Q9Y6E0 443 aa12.06□□□□□ -0.48
HMGB2-202ENST00000438704 POTEB3A0JP26 581 aa12.05□□□□□ -0.48
HMGB2-202ENST00000438704 POTEBQ6S5H4 581 aa12.05□□□□□ -0.48
HMGB2-202ENST00000438704 PBRM1Q86U86 1689 aa12.04□□□□□ -0.48
HMGB2-202ENST00000438704 MMRN1Q13201 1228 aa12.04□□□□□ -0.48
HMGB2-202ENST00000438704 ZNF608Q9ULD9 1512 aaPredicted RBP12.04□□□□□ -0.48
HMGB2-202ENST00000438704 ADAMTS12P58397 1594 aa12.04□□□□□ -0.48
HMGB2-202ENST00000438704 AQRO60306 1485 aaKnown RBP eCLIP12.03□□□□□ -0.481e-28■■■■□ 19.9
HMGB2-202ENST00000438704 STK25O00506 426 aa12.03□□□□□ -0.48
HMGB2-202ENST00000438704 KRTAP3-3Q9BYR6 98 aa12.03□□□□□ -0.48
HMGB2-202ENST00000438704 KRTAP3-2Q9BYR7 98 aa12.03□□□□□ -0.48
HMGB2-202ENST00000438704 VPS8Q8N3P4 1428 aa12.03□□□□□ -0.48
HMGB2-202ENST00000438704 PKD2Q13563 968 aa12.02□□□□□ -0.49
HMGB2-202ENST00000438704 EIF4G3O43432 1585 aaKnown RBP12.01□□□□□ -0.49
HMGB2-202ENST00000438704 MFRPQ9BY79 579 aa12.01□□□□□ -0.49
HMGB2-202ENST00000438704 MAGI1Q96QZ7 1491 aaPredicted RBP12.01□□□□□ -0.49
HMGB2-202ENST00000438704 ARHGAP35Q9NRY4 1499 aa11.99□□□□□ -0.49
HMGB2-202ENST00000438704 EFCAB5A4FU69 1503 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms