RNA–Protein interactions for RNA: ENST00000437072.5

H2AFV-206, Transcript of H2A histone family member V, humanhuman

TSL 4 BASIC

Gene H2AFV, Length 589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-206ENST00000437072 FAM9AQ8IZU1 332 aaPredicted RBP24.9■■□□□ 1.58
H2AFV-206ENST00000437072 NUP153P49790 1475 aaKnown RBP24.89■■□□□ 1.58
H2AFV-206ENST00000437072 MAGI2Q86UL8 1455 aa24.89■■□□□ 1.57
H2AFV-206ENST00000437072 PRXQ9BXM0 1461 aa24.88■■□□□ 1.57
H2AFV-206ENST00000437072 UHRF1BP1Q6BDS2 1440 aa24.86■■□□□ 1.57
H2AFV-206ENST00000437072 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.86■■□□□ 1.572e-6■■□□□ 13.3
H2AFV-206ENST00000437072 ATP10AO60312 1499 aa24.83■■□□□ 1.56
H2AFV-206ENST00000437072 CFAP74Q9C0B2 1584 aa24.82■■□□□ 1.56
H2AFV-206ENST00000437072 PLEKHD1A6NEE1 506 aa24.81■■□□□ 1.56
H2AFV-206ENST00000437072 IQSEC2Q5JU85 1478 aa24.81■■□□□ 1.56
H2AFV-206ENST00000437072 SCAPERQ9BY12 1400 aa24.8■■□□□ 1.56
H2AFV-206ENST00000437072 SAMD9Q5K651 1589 aa24.8■■□□□ 1.56
H2AFV-206ENST00000437072 C9orf84Q5VXU9 1444 aa24.78■■□□□ 1.56
H2AFV-206ENST00000437072 SETD1BQ9UPS6 1966 aaKnown RBP24.78■■□□□ 1.56
H2AFV-206ENST00000437072 UBAP1LF5GYI3 381 aa24.74■■□□□ 1.55
H2AFV-206ENST00000437072 NCOA1Q15788 1441 aa24.7■■□□□ 1.55
H2AFV-206ENST00000437072 ZNF335Q9H4Z2 1342 aaPredicted RBP24.68■■□□□ 1.54
H2AFV-206ENST00000437072 RANGAP1P46060 587 aaPredicted RBP24.67■■□□□ 1.54
H2AFV-206ENST00000437072 PLCH2O75038 1416 aa24.67■■□□□ 1.54
H2AFV-206ENST00000437072 C3P01024 1663 aa24.66■■□□□ 1.54
H2AFV-206ENST00000437072 MED1Q15648 1581 aaPredicted RBP24.63■■□□□ 1.53
H2AFV-206ENST00000437072 NCKAP5LQ9HCH0 1330 aa24.61■■□□□ 1.53
H2AFV-206ENST00000437072 TRAPPC8Q9Y2L5 1435 aa24.61■■□□□ 1.53
H2AFV-206ENST00000437072 AFAP1Q8N556 730 aa24.61■■□□□ 1.53
H2AFV-206ENST00000437072 HSPA1LP34931 641 aa24.6■■□□□ 1.53
H2AFV-206ENST00000437072 CAMSAP1Q5T5Y3 1602 aa24.57■■□□□ 1.52
H2AFV-206ENST00000437072 CDK13Q14004 1512 aaKnown RBP24.56■■□□□ 1.52
H2AFV-206ENST00000437072 DIP2CQ9Y2E4 1556 aa24.55■■□□□ 1.52
H2AFV-206ENST00000437072 EFCAB2Q5VUJ9 269 aa24.55■■□□□ 1.52
H2AFV-206ENST00000437072 KDM5CP41229 1560 aa24.52■■□□□ 1.52
H2AFV-206ENST00000437072 ZNF518AQ6AHZ1 1483 aa24.51■■□□□ 1.51
H2AFV-206ENST00000437072 MYT1LQ9UL68 1186 aa24.51■■□□□ 1.51
H2AFV-206ENST00000437072 PIP4K2BP78356 416 aa24.49■■□□□ 1.51
H2AFV-206ENST00000437072 ABCA6Q8N139 1617 aa24.48■■□□□ 1.51
H2AFV-206ENST00000437072 ESF1Q9H501 851 aaKnown RBP24.48■■□□□ 1.51
H2AFV-206ENST00000437072 SCAF1Q9H7N4 1312 aaKnown RBP24.48■■□□□ 1.51
H2AFV-206ENST00000437072 REREQ9P2R6 1566 aa24.48■■□□□ 1.51
H2AFV-206ENST00000437072 AGLP35573 1532 aa24.44■■□□□ 1.5
H2AFV-206ENST00000437072 MYO5CQ9NQX4 1742 aa24.44■■□□□ 1.5
H2AFV-206ENST00000437072 CSRNP3Q8WYN3 585 aa24.41■■□□□ 1.5
H2AFV-206ENST00000437072 PHF23Q9BUL5 403 aaPredicted RBP24.41■■□□□ 1.5
H2AFV-206ENST00000437072 MLH3Q9UHC1 1453 aa24.4■■□□□ 1.5
H2AFV-206ENST00000437072 KIF14Q15058 1648 aa24.39■■□□□ 1.5
H2AFV-206ENST00000437072 NPATQ14207 1427 aa24.39■■□□□ 1.5
H2AFV-206ENST00000437072 CNTLNQ9NXG0 1405 aa24.38■■□□□ 1.49
H2AFV-206ENST00000437072 PKD2Q13563 968 aa24.38■■□□□ 1.49
H2AFV-206ENST00000437072 ARHGAP5Q13017 1502 aa24.38■■□□□ 1.49
H2AFV-206ENST00000437072 ZMYM3Q14202 1370 aa24.37■■□□□ 1.49
H2AFV-206ENST00000437072 TCOF1Q13428 1488 aaKnown RBP24.37■■□□□ 1.49
H2AFV-206ENST00000437072 PLA2R1Q13018 1463 aa24.34■■□□□ 1.49
H2AFV-206ENST00000437072 PPP6R1Q9UPN7 881 aa24.34■■□□□ 1.49
H2AFV-206ENST00000437072 ATP1B4Q9UN42 357 aaPredicted RBP24.32■■□□□ 1.48
H2AFV-206ENST00000437072 TOM1O60784 492 aa24.31■■□□□ 1.48
H2AFV-206ENST00000437072 MYO3AQ8NEV4 1616 aa24.28■■□□□ 1.48
H2AFV-206ENST00000437072 KIDINS220Q9ULH0 1771 aa24.28■■□□□ 1.48
H2AFV-206ENST00000437072 MROH2AA6NES4 1674 aa24.27■■□□□ 1.48
H2AFV-206ENST00000437072 ZNF142P52746 1687 aaPredicted RBP24.27■■□□□ 1.48
H2AFV-206ENST00000437072 RGS17Q9UGC6 210 aaPredicted RBP24.27■■□□□ 1.48
H2AFV-206ENST00000437072 CEP170BQ9Y4F5 1589 aaPredicted RBP24.27■■□□□ 1.48
H2AFV-206ENST00000437072 ALKQ9UM73 1620 aa24.26■■□□□ 1.47
H2AFV-206ENST00000437072 SENP3Q9H4L4 574 aaPredicted RBP24.26■■□□□ 1.47
H2AFV-206ENST00000437072 CDC42BPBQ9Y5S2 1711 aa24.25■■□□□ 1.47
H2AFV-206ENST00000437072 PTPRKQ15262 1439 aa24.25■■□□□ 1.47
H2AFV-206ENST00000437072 TROQ12816 1431 aaPredicted RBP24.24■■□□□ 1.47
H2AFV-206ENST00000437072 ABCC1P33527 1531 aa24.23■■□□□ 1.47
H2AFV-206ENST00000437072 SUPT6HQ7KZ85 1726 aaKnown RBP24.23■■□□□ 1.47
H2AFV-206ENST00000437072 CDK11AQ9UQ88 783 aaPredicted RBP24.21■■□□□ 1.47
H2AFV-206ENST00000437072 CLTCQ00610 1675 aaKnown RBP24.2■■□□□ 1.46
H2AFV-206ENST00000437072 CPS1P31327 1500 aa24.2■■□□□ 1.46
H2AFV-206ENST00000437072 SHANK2Q9UPX8 1470 aa24.19■■□□□ 1.46
H2AFV-206ENST00000437072 ITSN2Q9NZM3 1697 aa24.19■■□□□ 1.46
H2AFV-206ENST00000437072 NEURL4Q96JN8 1562 aa24.15■■□□□ 1.46
H2AFV-206ENST00000437072 DNMT1P26358 1616 aaKnown RBP24.13■■□□□ 1.45
H2AFV-206ENST00000437072 CLIP1P30622 1438 aa24.12■■□□□ 1.45
H2AFV-206ENST00000437072 PREX2Q70Z35 1606 aa24.12■■□□□ 1.45
H2AFV-206ENST00000437072 SAMD9LQ8IVG5 1584 aa24.12■■□□□ 1.45
H2AFV-206ENST00000437072 A2ML1A8K2U0 1454 aa24.11■■□□□ 1.45
H2AFV-206ENST00000437072 VWDEQ8N2E2 1590 aa24.1■■□□□ 1.45
H2AFV-206ENST00000437072 GGT6Q6P531 493 aa24.09■■□□□ 1.45
H2AFV-206ENST00000437072 FMN1Q68DA7 1419 aa24.09■■□□□ 1.45
H2AFV-206ENST00000437072 LRRIQ1Q96JM4 1722 aa24.08■■□□□ 1.45
H2AFV-206ENST00000437072 POTEAQ6S8J7 498 aa24.06■■□□□ 1.44
H2AFV-206ENST00000437072 SPAG9O60271 1321 aaKnown RBP24.06■■□□□ 1.44
H2AFV-206ENST00000437072 POLR1AO95602 1720 aaPredicted RBP24.04■■□□□ 1.44
H2AFV-206ENST00000437072 PLXNC1O60486 1568 aa24.04■■□□□ 1.44
H2AFV-206ENST00000437072 HNRNPMP52272 730 aaKnown RBP eCLIP24.04■■□□□ 1.443e-6■□□□□ 11
H2AFV-206ENST00000437072 ARHGAP35Q9NRY4 1499 aa24.03■■□□□ 1.44
H2AFV-206ENST00000437072 ZNF777Q9ULD5 760 aaPredicted RBP24.03■■□□□ 1.44
H2AFV-206ENST00000437072 FBXO31Q5XUX0 539 aaPredicted RBP24.02■■□□□ 1.44
H2AFV-206ENST00000437072 A2MP01023 1474 aa24.01■■□□□ 1.43
H2AFV-206ENST00000437072 SYCP2Q9BX26 1530 aa24■■□□□ 1.43
H2AFV-206ENST00000437072 EHMT2Q96KQ7 1210 aa24■■□□□ 1.43
H2AFV-206ENST00000437072 CDC42BPAQ5VT25 1732 aa23.99■■□□□ 1.43
H2AFV-206ENST00000437072 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.99■■□□□ 1.431e-30■■■□□ 14.6
H2AFV-206ENST00000437072 STRCP1A6NGW2 1772 aa23.97■■□□□ 1.43
H2AFV-206ENST00000437072 ATP7AQ04656 1500 aa23.97■■□□□ 1.43
H2AFV-206ENST00000437072 ANKLE2Q86XL3 938 aa23.97■■□□□ 1.43
H2AFV-206ENST00000437072 LRRC7Q96NW7 1537 aa23.96■■□□□ 1.43
H2AFV-206ENST00000437072 EEA1Q15075 1411 aa23.96■■□□□ 1.43
H2AFV-206ENST00000437072 TNRQ92752 1358 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms