RNA–Protein interactions for RNA: ENST00000436100.1

TPM4P1-201, Transcript of tropomyosin 4 pseudogene 1, humanhuman

BASIC

Gene TPM4P1, Length 807 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P1-201ENST00000436100 SAMD9Q5K651 1589 aa30.28■■■□□ 2.44
TPM4P1-201ENST00000436100 PREX1Q8TCU6 1659 aa30.26■■■□□ 2.43
TPM4P1-201ENST00000436100 HECW1Q76N89 1606 aa30.24■■■□□ 2.43
TPM4P1-201ENST00000436100 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.23■■■□□ 2.43
TPM4P1-201ENST00000436100 ARHGEF12Q9NZN5 1544 aa30.22■■■□□ 2.43
TPM4P1-201ENST00000436100 STRCQ7RTU9 1775 aa30.21■■■□□ 2.43
TPM4P1-201ENST00000436100 RANGAP1P46060 587 aaPredicted RBP30.18■■■□□ 2.42
TPM4P1-201ENST00000436100 UHRF1BP1Q6BDS2 1440 aa30.18■■■□□ 2.42
TPM4P1-201ENST00000436100 SCAPERQ9BY12 1400 aa30.18■■■□□ 2.42
TPM4P1-201ENST00000436100 ATP10AO60312 1499 aa30.18■■■□□ 2.42
TPM4P1-201ENST00000436100 C9orf84Q5VXU9 1444 aa30.15■■■□□ 2.42
TPM4P1-201ENST00000436100 CSRNP3Q8WYN3 585 aa30.13■■■□□ 2.41
TPM4P1-201ENST00000436100 PTPRTO14522 1441 aa30.13■■■□□ 2.41
TPM4P1-201ENST00000436100 PLCH2O75038 1416 aa30.06■■■□□ 2.4
TPM4P1-201ENST00000436100 SETD1BQ9UPS6 1966 aaKnown RBP30.04■■■□□ 2.4
TPM4P1-201ENST00000436100 LTBP4Q8N2S1 1624 aa30.04■■■□□ 2.4
TPM4P1-201ENST00000436100 IQSEC2Q5JU85 1478 aa30.01■■■□□ 2.4
TPM4P1-201ENST00000436100 EFCAB2Q5VUJ9 269 aa30■■■□□ 2.39
TPM4P1-201ENST00000436100 MYT1LQ9UL68 1186 aa29.98■■■□□ 2.39
TPM4P1-201ENST00000436100 CDK13Q14004 1512 aaKnown RBP29.93■■■□□ 2.38
TPM4P1-201ENST00000436100 AFAP1Q8N556 730 aa29.93■■■□□ 2.38
TPM4P1-201ENST00000436100 ESF1Q9H501 851 aaKnown RBP29.93■■■□□ 2.38
TPM4P1-201ENST00000436100 EEA1Q15075 1411 aa29.93■■■□□ 2.38
TPM4P1-201ENST00000436100 ZNF518AQ6AHZ1 1483 aa29.9■■■□□ 2.38
TPM4P1-201ENST00000436100 NCOA1Q15788 1441 aa29.89■■■□□ 2.38
TPM4P1-201ENST00000436100 TRAPPC8Q9Y2L5 1435 aa29.89■■■□□ 2.38
TPM4P1-201ENST00000436100 UBAP1LF5GYI3 381 aa29.89■■■□□ 2.38
TPM4P1-201ENST00000436100 C3P01024 1663 aa29.87■■■□□ 2.37
TPM4P1-201ENST00000436100 ATP1B4Q9UN42 357 aaPredicted RBP29.82■■■□□ 2.36
TPM4P1-201ENST00000436100 MYO5CQ9NQX4 1742 aa29.82■■■□□ 2.36
TPM4P1-201ENST00000436100 KDM5CP41229 1560 aa29.81■■■□□ 2.36
TPM4P1-201ENST00000436100 DIP2CQ9Y2E4 1556 aa29.81■■■□□ 2.36
TPM4P1-201ENST00000436100 ZNF335Q9H4Z2 1342 aaPredicted RBP29.79■■■□□ 2.36
TPM4P1-201ENST00000436100 REREQ9P2R6 1566 aa29.78■■■□□ 2.36
TPM4P1-201ENST00000436100 ARHGAP5Q13017 1502 aa29.77■■■□□ 2.36
TPM4P1-201ENST00000436100 CDK11AQ9UQ88 783 aaPredicted RBP29.77■■■□□ 2.36
TPM4P1-201ENST00000436100 NCKAP5LQ9HCH0 1330 aa29.76■■■□□ 2.36
TPM4P1-201ENST00000436100 CAMSAP1Q5T5Y3 1602 aa29.75■■■□□ 2.35
TPM4P1-201ENST00000436100 AGLP35573 1532 aa29.73■■■□□ 2.35
TPM4P1-201ENST00000436100 CNTLNQ9NXG0 1405 aa29.72■■■□□ 2.35
TPM4P1-201ENST00000436100 ABCA6Q8N139 1617 aa29.72■■■□□ 2.35
TPM4P1-201ENST00000436100 MLH3Q9UHC1 1453 aa29.72■■■□□ 2.35
TPM4P1-201ENST00000436100 KIF14Q15058 1648 aa29.7■■■□□ 2.34
TPM4P1-201ENST00000436100 NPATQ14207 1427 aa29.66■■■□□ 2.34
TPM4P1-201ENST00000436100 TROQ12816 1431 aaPredicted RBP29.63■■■□□ 2.33
TPM4P1-201ENST00000436100 HSPA1LP34931 641 aa29.63■■■□□ 2.33
TPM4P1-201ENST00000436100 PKD2Q13563 968 aa29.63■■■□□ 2.33
TPM4P1-201ENST00000436100 SCAF1Q9H7N4 1312 aaKnown RBP29.63■■■□□ 2.33
TPM4P1-201ENST00000436100 FMN1Q68DA7 1419 aa29.62■■■□□ 2.33
TPM4P1-201ENST00000436100 ZMYM3Q14202 1370 aa29.61■■■□□ 2.33
TPM4P1-201ENST00000436100 CLIP1P30622 1438 aa29.61■■■□□ 2.33
TPM4P1-201ENST00000436100 MED1Q15648 1581 aaPredicted RBP29.6■■■□□ 2.33
TPM4P1-201ENST00000436100 PIP4K2BP78356 416 aa29.58■■■□□ 2.33
TPM4P1-201ENST00000436100 PPP6R1Q9UPN7 881 aa29.55■■■□□ 2.32
TPM4P1-201ENST00000436100 PLA2R1Q13018 1463 aa29.55■■■□□ 2.32
TPM4P1-201ENST00000436100 UBTFP17480 764 aaKnown RBP29.53■■■□□ 2.32
TPM4P1-201ENST00000436100 ABCC1P33527 1531 aa29.53■■■□□ 2.32
TPM4P1-201ENST00000436100 CDC42BPBQ9Y5S2 1711 aa29.52■■■□□ 2.32
TPM4P1-201ENST00000436100 PHF23Q9BUL5 403 aaPredicted RBP29.52■■■□□ 2.32
TPM4P1-201ENST00000436100 MROH2AA6NES4 1674 aa29.52■■■□□ 2.32
TPM4P1-201ENST00000436100 TCOF1Q13428 1488 aaKnown RBP29.51■■■□□ 2.31
TPM4P1-201ENST00000436100 TOM1O60784 492 aa29.51■■■□□ 2.31
TPM4P1-201ENST00000436100 KIDINS220Q9ULH0 1771 aa29.51■■■□□ 2.31
TPM4P1-201ENST00000436100 ITSN2Q9NZM3 1697 aa29.47■■■□□ 2.31
TPM4P1-201ENST00000436100 MYO3AQ8NEV4 1616 aa29.45■■■□□ 2.31
TPM4P1-201ENST00000436100 CEP170BQ9Y4F5 1589 aaPredicted RBP29.45■■■□□ 2.31
TPM4P1-201ENST00000436100 ZNF142P52746 1687 aaPredicted RBP29.44■■■□□ 2.3
TPM4P1-201ENST00000436100 PREX2Q70Z35 1606 aa29.43■■■□□ 2.3
TPM4P1-201ENST00000436100 EHMT2Q96KQ7 1210 aa29.43■■■□□ 2.3
TPM4P1-201ENST00000436100 PTPRKQ15262 1439 aa29.42■■■□□ 2.3
TPM4P1-201ENST00000436100 ARHGAP35Q9NRY4 1499 aa29.42■■■□□ 2.3
TPM4P1-201ENST00000436100 SUPT6HQ7KZ85 1726 aaKnown RBP29.41■■■□□ 2.3
TPM4P1-201ENST00000436100 ZNF777Q9ULD5 760 aaPredicted RBP29.39■■■□□ 2.3
TPM4P1-201ENST00000436100 SPAG9O60271 1321 aaKnown RBP29.39■■■□□ 2.3
TPM4P1-201ENST00000436100 CLTCQ00610 1675 aaKnown RBP29.38■■■□□ 2.29
TPM4P1-201ENST00000436100 GGT6Q6P531 493 aa29.37■■■□□ 2.29
TPM4P1-201ENST00000436100 SAMD9LQ8IVG5 1584 aa29.37■■■□□ 2.29
TPM4P1-201ENST00000436100 CPS1P31327 1500 aa29.35■■■□□ 2.29
TPM4P1-201ENST00000436100 LRRIQ1Q96JM4 1722 aa29.31■■■□□ 2.28
TPM4P1-201ENST00000436100 SHANK2Q9UPX8 1470 aa29.31■■■□□ 2.28
TPM4P1-201ENST00000436100 HNRNPMP52272 730 aaKnown RBP eCLIP29.31■■■□□ 2.28
TPM4P1-201ENST00000436100 A2ML1A8K2U0 1454 aa29.29■■■□□ 2.28
TPM4P1-201ENST00000436100 A2MP01023 1474 aa29.28■■■□□ 2.28
TPM4P1-201ENST00000436100 SYCP2Q9BX26 1530 aa29.26■■■□□ 2.27
TPM4P1-201ENST00000436100 SENP3Q9H4L4 574 aaPredicted RBP29.26■■■□□ 2.27
TPM4P1-201ENST00000436100 CCDC18Q5T9S5 1454 aa29.25■■■□□ 2.27
TPM4P1-201ENST00000436100 DNMT1P26358 1616 aaKnown RBP29.25■■■□□ 2.27
TPM4P1-201ENST00000436100 CDC42BPAQ5VT25 1732 aa29.25■■■□□ 2.27
TPM4P1-201ENST00000436100 PLXNC1O60486 1568 aa29.24■■■□□ 2.27
TPM4P1-201ENST00000436100 ATP7AQ04656 1500 aa29.24■■■□□ 2.27
TPM4P1-201ENST00000436100 NEURL4Q96JN8 1562 aa29.19■■■□□ 2.26
TPM4P1-201ENST00000436100 CASKIN1Q8WXD9 1431 aa29.19■■■□□ 2.26
TPM4P1-201ENST00000436100 ANKLE2Q86XL3 938 aa29.18■■■□□ 2.26
TPM4P1-201ENST00000436100 POLR1AO95602 1720 aaPredicted RBP29.17■■■□□ 2.26
TPM4P1-201ENST00000436100 ALKQ9UM73 1620 aa29.16■■■□□ 2.26
TPM4P1-201ENST00000436100 GPATCH8Q9UKJ3 1502 aaKnown RBP29.15■■■□□ 2.26
TPM4P1-201ENST00000436100 TNRQ92752 1358 aa29.15■■■□□ 2.26
TPM4P1-201ENST00000436100 INO80Q9ULG1 1556 aaPredicted RBP29.15■■■□□ 2.26
TPM4P1-201ENST00000436100 KIAA1107Q9UPP5 1409 aa29.15■■■□□ 2.26
TPM4P1-201ENST00000436100 FBXO31Q5XUX0 539 aaPredicted RBP29.14■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms