RNA–Protein interactions for RNA: ENST00000436005.2

PNKD-204, Transcript of PNKD, MBL domain containing, humanhuman

TSL 5 BASIC

Gene PNKD, Length 978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKD-204ENST00000436005 FER1L4A9Z1Z3 1794 aa26.84■■□□□ 1.89
PNKD-204ENST00000436005 CEBPAP49715 358 aaPredicted RBP26.83■■□□□ 1.89
PNKD-204ENST00000436005 CSRNP3Q8WYN3 585 aa26.83■■□□□ 1.89
PNKD-204ENST00000436005 SCAPERQ9BY12 1400 aa26.79■■□□□ 1.88
PNKD-204ENST00000436005 ARHGEF12Q9NZN5 1544 aa26.79■■□□□ 1.88
PNKD-204ENST00000436005 PREX1Q8TCU6 1659 aa26.74■■□□□ 1.87
PNKD-204ENST00000436005 ATP10AO60312 1499 aa26.74■■□□□ 1.87
PNKD-204ENST00000436005 STRCQ7RTU9 1775 aa26.73■■□□□ 1.87
PNKD-204ENST00000436005 PLCH2O75038 1416 aa26.73■■□□□ 1.87
PNKD-204ENST00000436005 C9orf84Q5VXU9 1444 aa26.71■■□□□ 1.87
PNKD-204ENST00000436005 CDK13Q14004 1512 aaKnown RBP26.7■■□□□ 1.87
PNKD-204ENST00000436005 DMRT2Q9Y5R5 561 aa26.7■■□□□ 1.86
PNKD-204ENST00000436005 UHRF1BP1Q6BDS2 1440 aa26.64■■□□□ 1.85
PNKD-204ENST00000436005 SPATA31D1Q6ZQQ2 1576 aa26.63■■□□□ 1.85
PNKD-204ENST00000436005 EFCAB2Q5VUJ9 269 aa26.61■■□□□ 1.85
PNKD-204ENST00000436005 AFAP1Q8N556 730 aa26.6■■□□□ 1.85
PNKD-204ENST00000436005 PTPRTO14522 1441 aa26.57■■□□□ 1.84
PNKD-204ENST00000436005 LTBP4Q8N2S1 1624 aa26.54■■□□□ 1.84
PNKD-204ENST00000436005 ZNF518AQ6AHZ1 1483 aa26.54■■□□□ 1.84
PNKD-204ENST00000436005 ATP1B4Q9UN42 357 aaPredicted RBP26.52■■□□□ 1.84
PNKD-204ENST00000436005 MYO5CQ9NQX4 1742 aa26.51■■□□□ 1.83
PNKD-204ENST00000436005 KDM5CP41229 1560 aa26.51■■□□□ 1.83
PNKD-204ENST00000436005 MYT1LQ9UL68 1186 aa26.51■■□□□ 1.83
PNKD-204ENST00000436005 SETD1BQ9UPS6 1966 aaKnown RBP26.51■■□□□ 1.83
PNKD-204ENST00000436005 DIP2CQ9Y2E4 1556 aa26.5■■□□□ 1.83
PNKD-204ENST00000436005 KIF14Q15058 1648 aa26.5■■□□□ 1.83
PNKD-204ENST00000436005 EEA1Q15075 1411 aa26.48■■□□□ 1.83
PNKD-204ENST00000436005 C3P01024 1663 aa26.48■■□□□ 1.83
PNKD-204ENST00000436005 ARHGAP5Q13017 1502 aa26.46■■□□□ 1.83
PNKD-204ENST00000436005 TRAPPC8Q9Y2L5 1435 aa26.44■■□□□ 1.82
PNKD-204ENST00000436005 REREQ9P2R6 1566 aa26.44■■□□□ 1.82
PNKD-204ENST00000436005 ABCA6Q8N139 1617 aa26.43■■□□□ 1.82
PNKD-204ENST00000436005 NCOA1Q15788 1441 aa26.43■■□□□ 1.82
PNKD-204ENST00000436005 CDK11AQ9UQ88 783 aaPredicted RBP26.42■■□□□ 1.82
PNKD-204ENST00000436005 IQSEC2Q5JU85 1478 aa26.42■■□□□ 1.82
PNKD-204ENST00000436005 ESF1Q9H501 851 aaKnown RBP26.4■■□□□ 1.82
PNKD-204ENST00000436005 MLH3Q9UHC1 1453 aa26.4■■□□□ 1.82
PNKD-204ENST00000436005 TROQ12816 1431 aaPredicted RBP26.39■■□□□ 1.82
PNKD-204ENST00000436005 AGLP35573 1532 aa26.38■■□□□ 1.81
PNKD-204ENST00000436005 FMN1Q68DA7 1419 aa26.38■■□□□ 1.81
PNKD-204ENST00000436005 EHMT2Q96KQ7 1210 aa26.36■■□□□ 1.81
PNKD-204ENST00000436005 ARHGAP35Q9NRY4 1499 aa26.33■■□□□ 1.81
PNKD-204ENST00000436005 ZNF335Q9H4Z2 1342 aaPredicted RBP26.33■■□□□ 1.81
PNKD-204ENST00000436005 CAMSAP1Q5T5Y3 1602 aa26.32■■□□□ 1.8
PNKD-204ENST00000436005 NCKAP5LQ9HCH0 1330 aa26.32■■□□□ 1.8
PNKD-204ENST00000436005 CDC42BPBQ9Y5S2 1711 aa26.31■■□□□ 1.8
PNKD-204ENST00000436005 CLIP1P30622 1438 aa26.31■■□□□ 1.8
PNKD-204ENST00000436005 UBAP1LF5GYI3 381 aa26.3■■□□□ 1.8
PNKD-204ENST00000436005 CNTLNQ9NXG0 1405 aa26.3■■□□□ 1.8
PNKD-204ENST00000436005 ABCC1P33527 1531 aa26.29■■□□□ 1.8
PNKD-204ENST00000436005 UBTFP17480 764 aaKnown RBP26.27■■□□□ 1.8
PNKD-204ENST00000436005 KIDINS220Q9ULH0 1771 aa26.25■■□□□ 1.79
PNKD-204ENST00000436005 LRRIQ1Q96JM4 1722 aa26.25■■□□□ 1.79
PNKD-204ENST00000436005 NPATQ14207 1427 aa26.24■■□□□ 1.79
PNKD-204ENST00000436005 ZMYM3Q14202 1370 aa26.24■■□□□ 1.79
PNKD-204ENST00000436005 ITSN2Q9NZM3 1697 aa26.23■■□□□ 1.79
PNKD-204ENST00000436005 PREX2Q70Z35 1606 aa26.22■■□□□ 1.79
PNKD-204ENST00000436005 MROH2AA6NES4 1674 aa26.17■■□□□ 1.78
PNKD-204ENST00000436005 SAMD9LQ8IVG5 1584 aa26.15■■□□□ 1.78
PNKD-204ENST00000436005 PKD2Q13563 968 aa26.14■■□□□ 1.78
PNKD-204ENST00000436005 TCOF1Q13428 1488 aaKnown RBP26.14■■□□□ 1.78
PNKD-204ENST00000436005 PLA2R1Q13018 1463 aa26.13■■□□□ 1.77
PNKD-204ENST00000436005 ZNF777Q9ULD5 760 aaPredicted RBP26.13■■□□□ 1.77
PNKD-204ENST00000436005 MYO3AQ8NEV4 1616 aa26.12■■□□□ 1.77
PNKD-204ENST00000436005 HSPA1LP34931 641 aa26.11■■□□□ 1.77
PNKD-204ENST00000436005 PTPRKQ15262 1439 aa26.11■■□□□ 1.77
PNKD-204ENST00000436005 SPAG9O60271 1321 aaKnown RBP26.1■■□□□ 1.77
PNKD-204ENST00000436005 CLTCQ00610 1675 aaKnown RBP26.09■■□□□ 1.77
PNKD-204ENST00000436005 CDC42BPAQ5VT25 1732 aa26.09■■□□□ 1.77
PNKD-204ENST00000436005 SUPT6HQ7KZ85 1726 aaKnown RBP26.09■■□□□ 1.77
PNKD-204ENST00000436005 CEP170BQ9Y4F5 1589 aaPredicted RBP26.09■■□□□ 1.77
PNKD-204ENST00000436005 HNRNPMP52272 730 aaKnown RBP eCLIP26.09■■□□□ 1.77
PNKD-204ENST00000436005 ZNF142P52746 1687 aaPredicted RBP26.09■■□□□ 1.77
PNKD-204ENST00000436005 PPP6R1Q9UPN7 881 aa26.08■■□□□ 1.77
PNKD-204ENST00000436005 SYCP2Q9BX26 1530 aa26.08■■□□□ 1.77
PNKD-204ENST00000436005 MED1Q15648 1581 aaPredicted RBP26.06■■□□□ 1.76
PNKD-204ENST00000436005 SCAF1Q9H7N4 1312 aaKnown RBP26.06■■□□□ 1.76
PNKD-204ENST00000436005 PIP4K2BP78356 416 aa26.05■■□□□ 1.76
PNKD-204ENST00000436005 CASKIN1Q8WXD9 1431 aa26.05■■□□□ 1.76
PNKD-204ENST00000436005 GGT6Q6P531 493 aa26.04■■□□□ 1.76
PNKD-204ENST00000436005 CCDC18Q5T9S5 1454 aa26.04■■□□□ 1.76
PNKD-204ENST00000436005 PLXNC1O60486 1568 aa26.03■■□□□ 1.76
PNKD-204ENST00000436005 A2MP01023 1474 aa26.02■■□□□ 1.76
PNKD-204ENST00000436005 ATP7AQ04656 1500 aa26.02■■□□□ 1.76
PNKD-204ENST00000436005 GPATCH8Q9UKJ3 1502 aaKnown RBP26.01■■□□□ 1.75
PNKD-204ENST00000436005 INO80Q9ULG1 1556 aaPredicted RBP25.97■■□□□ 1.75
PNKD-204ENST00000436005 TOM1O60784 492 aa25.96■■□□□ 1.75
PNKD-204ENST00000436005 A2ML1A8K2U0 1454 aa25.95■■□□□ 1.74
PNKD-204ENST00000436005 DNMT1P26358 1616 aaKnown RBP25.95■■□□□ 1.74
PNKD-204ENST00000436005 KIAA1107Q9UPP5 1409 aa25.94■■□□□ 1.74
PNKD-204ENST00000436005 CFDP1Q9UEE9 299 aaPredicted RBP25.91■■□□□ 1.74
PNKD-204ENST00000436005 SHANK2Q9UPX8 1470 aa25.91■■□□□ 1.74
PNKD-204ENST00000436005 NEURL4Q96JN8 1562 aa25.9■■□□□ 1.74
PNKD-204ENST00000436005 CPS1P31327 1500 aa25.9■■□□□ 1.74
PNKD-204ENST00000436005 FBXO31Q5XUX0 539 aaPredicted RBP25.89■■□□□ 1.74
PNKD-204ENST00000436005 PLEKHH2Q8IVE3 1493 aa25.87■■□□□ 1.73
PNKD-204ENST00000436005 FYCO1Q9BQS8 1478 aa25.86■■□□□ 1.73
PNKD-204ENST00000436005 PHF23Q9BUL5 403 aaPredicted RBP25.86■■□□□ 1.73
PNKD-204ENST00000436005 ALKQ9UM73 1620 aa25.85■■□□□ 1.73
PNKD-204ENST00000436005 ZNF644Q9H582 1327 aaPredicted RBP25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms