RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 PKD2Q13563 968 aa15.92■□□□□ 0.14
UBE3B-203ENST00000434735 SYTL4Q96C24 671 aaPredicted RBP15.91■□□□□ 0.14
UBE3B-203ENST00000434735 CCDC88BA6NC98 1476 aa15.9■□□□□ 0.14
UBE3B-203ENST00000434735 NUTM2BA6NNL0 878 aaPredicted RBP15.89■□□□□ 0.13
UBE3B-203ENST00000434735 NUTM2EB1AL46 878 aaPredicted RBP15.89■□□□□ 0.13
UBE3B-203ENST00000434735 NUTM2AQ8IVF1 878 aaPredicted RBP15.89■□□□□ 0.13
UBE3B-203ENST00000434735 PPP1R1BQ9UD71 204 aaPredicted RBP15.89■□□□□ 0.13
UBE3B-203ENST00000434735 TMF1P82094 1093 aa15.88■□□□□ 0.13
UBE3B-203ENST00000434735 MORC1Q86VD1 984 aa15.88■□□□□ 0.13
UBE3B-203ENST00000434735 AMPHP49418 695 aa15.88■□□□□ 0.13
UBE3B-203ENST00000434735 DNAJC5BQ9UF47 199 aa15.87■□□□□ 0.13
UBE3B-203ENST00000434735 MROH2BQ7Z745 1585 aa15.87■□□□□ 0.13
UBE3B-203ENST00000434735 NUP155O75694 1391 aa15.86■□□□□ 0.13
UBE3B-203ENST00000434735 FOXD1Q16676 465 aa15.86■□□□□ 0.13
UBE3B-203ENST00000434735 NCBP3Q53F19 620 aaKnown RBP15.85■□□□□ 0.13
UBE3B-203ENST00000434735 FTSJ3Q8IY81 847 aaKnown RBP15.85■□□□□ 0.13
UBE3B-203ENST00000434735 PNNQ9H307 717 aaKnown RBP15.84■□□□□ 0.13
UBE3B-203ENST00000434735 ATAD2BQ9ULI0 1458 aa15.83■□□□□ 0.13
UBE3B-203ENST00000434735 PSME1Q06323 249 aa15.83■□□□□ 0.12
UBE3B-203ENST00000434735 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.83■□□□□ 0.12
UBE3B-203ENST00000434735 GTF3C3Q9Y5Q9 886 aa15.82■□□□□ 0.12
UBE3B-203ENST00000434735 ANKRD30AQ9BXX3 1397 aa15.81■□□□□ 0.12
UBE3B-203ENST00000434735 SIN3AQ96ST3 1273 aa15.79■□□□□ 0.12
UBE3B-203ENST00000434735 CHMP3Q9Y3E7 222 aa15.79■□□□□ 0.12
UBE3B-203ENST00000434735 PROSER2Q86WR7 435 aaPredicted RBP15.78■□□□□ 0.12
UBE3B-203ENST00000434735 CLSTN1O94985 981 aa15.78■□□□□ 0.12
UBE3B-203ENST00000434735 TRAK1Q9UPV9 953 aa15.78■□□□□ 0.12
UBE3B-203ENST00000434735 AQRO60306 1485 aaKnown RBP eCLIP15.78■□□□□ 0.121e-6■■■■■ 33.2
UBE3B-203ENST00000434735 NAP1L2Q9ULW6 460 aaPredicted RBP15.78■□□□□ 0.12
UBE3B-203ENST00000434735 USP35Q9P2H5 1018 aa15.77■□□□□ 0.11
UBE3B-203ENST00000434735 FMN1Q68DA7 1419 aa15.76■□□□□ 0.11
UBE3B-203ENST00000434735 TAF7LQ5H9L4 462 aa15.76■□□□□ 0.11
UBE3B-203ENST00000434735 FRAT1Q92837 279 aaPredicted RBP15.76■□□□□ 0.11
UBE3B-203ENST00000434735 RSPH4AQ5TD94 716 aa15.76■□□□□ 0.11
UBE3B-203ENST00000434735 FHOD3Q2V2M9 1422 aa15.75■□□□□ 0.11
UBE3B-203ENST00000434735 FGD1P98174 961 aa15.74■□□□□ 0.11
UBE3B-203ENST00000434735 ABCC8Q09428 1581 aa15.74■□□□□ 0.11
UBE3B-203ENST00000434735 FRAT2O75474 233 aaPredicted RBP15.74■□□□□ 0.11
UBE3B-203ENST00000434735 TERF2IPQ9NYB0 399 aa15.74■□□□□ 0.11
UBE3B-203ENST00000434735 TNIKQ9UKE5 1360 aa15.73■□□□□ 0.11
UBE3B-203ENST00000434735 ARHGAP35Q9NRY4 1499 aa15.72■□□□□ 0.11
UBE3B-203ENST00000434735 KCNJ4P48050 445 aa15.71■□□□□ 0.11
UBE3B-203ENST00000434735 CCDC136Q96JN2 1154 aa15.71■□□□□ 0.1
UBE3B-203ENST00000434735 TPRNQ4KMQ1 711 aa15.69■□□□□ 0.1
UBE3B-203ENST00000434735 VGFO15240 615 aaPredicted RBP15.69■□□□□ 0.1
UBE3B-203ENST00000434735 U2AF1L5P0DN76 240 aaPredicted RBP15.68■□□□□ 0.1
UBE3B-203ENST00000434735 U2AF1Q01081 240 aaKnown RBP eCLIP15.68■□□□□ 0.1
UBE3B-203ENST00000434735 MINK1Q8N4C8 1332 aaPredicted RBP15.68■□□□□ 0.1
UBE3B-203ENST00000434735 GAPVD1Q14C86 1478 aa15.67■□□□□ 0.1
UBE3B-203ENST00000434735 GORABQ5T7V8 394 aa15.67■□□□□ 0.1
UBE3B-203ENST00000434735 RAPGEF2Q9Y4G8 1499 aa15.67■□□□□ 0.1
UBE3B-203ENST00000434735 TXNDC2Q86VQ3 553 aa15.67■□□□□ 0.1
UBE3B-203ENST00000434735 CCDC18Q5T9S5 1454 aa15.67■□□□□ 0.1
UBE3B-203ENST00000434735 RAD54L2Q9Y4B4 1467 aa15.66■□□□□ 0.1
UBE3B-203ENST00000434735 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.66■□□□□ 0.1
UBE3B-203ENST00000434735 C1orf141Q5JVX7 400 aa15.66■□□□□ 0.1
UBE3B-203ENST00000434735 CASC1Q6TDU7 716 aa15.66■□□□□ 0.1
UBE3B-203ENST00000434735 EIF5BO60841 1220 aaKnown RBP15.65■□□□□ 0.1
UBE3B-203ENST00000434735 STRN4Q9NRL3 753 aa15.65■□□□□ 0.1
UBE3B-203ENST00000434735 ROCK2O75116 1388 aaKnown RBP15.65■□□□□ 0.1
UBE3B-203ENST00000434735 NUTM2GQ5VZR2 741 aa15.65■□□□□ 0.1
UBE3B-203ENST00000434735 FBXW7Q969H0 707 aa15.64■□□□□ 0.09
UBE3B-203ENST00000434735 FKBP8Q14318 412 aa15.63■□□□□ 0.09
UBE3B-203ENST00000434735 NGEFQ8N5V2 710 aa15.63■□□□□ 0.09
UBE3B-203ENST00000434735 ESCO1Q5FWF5 840 aa15.63■□□□□ 0.09
UBE3B-203ENST00000434735 NCLP19338 710 aaKnown RBP15.62■□□□□ 0.09
UBE3B-203ENST00000434735 IRX6P78412 446 aaPredicted RBP15.62■□□□□ 0.09
UBE3B-203ENST00000434735 APBB1O00213 710 aa15.62■□□□□ 0.09
UBE3B-203ENST00000434735 WIZO95785 1651 aa15.61■□□□□ 0.09
UBE3B-203ENST00000434735 EIF3AQ14152 1382 aaKnown RBP15.61■□□□□ 0.09
UBE3B-203ENST00000434735 KANK4Q5T7N3 995 aaPredicted RBP15.6■□□□□ 0.09
UBE3B-203ENST00000434735 THEMISQ8N1K5 641 aaPredicted RBP15.6■□□□□ 0.09
UBE3B-203ENST00000434735 TTC5Q8N0Z6 440 aa15.6■□□□□ 0.09
UBE3B-203ENST00000434735 NLRP2Q9NX02 1062 aa15.6■□□□□ 0.09
UBE3B-203ENST00000434735 NESP48681 1621 aa15.6■□□□□ 0.09
UBE3B-203ENST00000434735 PRG4Q92954 1404 aaPredicted RBP15.6■□□□□ 0.09
UBE3B-203ENST00000434735 MPHOSPH9Q99550 1183 aa15.6■□□□□ 0.09
UBE3B-203ENST00000434735 ZRSR1Q15695 479 aaKnown RBP15.59■□□□□ 0.09
UBE3B-203ENST00000434735 COG3Q96JB2 828 aa15.59■□□□□ 0.09
UBE3B-203ENST00000434735 STK31Q9BXU1 1019 aa15.59■□□□□ 0.09
UBE3B-203ENST00000434735 RAPGEF3O95398 923 aa15.58■□□□□ 0.09
UBE3B-203ENST00000434735 ANKLE2Q86XL3 938 aa15.58■□□□□ 0.09
UBE3B-203ENST00000434735 CWC22Q9HCG8 908 aaKnown RBP15.58■□□□□ 0.08
UBE3B-203ENST00000434735 TOP2AP11388 1531 aaKnown RBP15.57■□□□□ 0.08
UBE3B-203ENST00000434735 AFAP1Q8N556 730 aa15.57■□□□□ 0.08
UBE3B-203ENST00000434735 CC2D2AQ9P2K1 1620 aa15.56■□□□□ 0.08
UBE3B-203ENST00000434735 POGZQ7Z3K3 1410 aa15.56■□□□□ 0.08
UBE3B-203ENST00000434735 MRC2Q9UBG0 1479 aa15.56■□□□□ 0.08
UBE3B-203ENST00000434735 FGD5Q6ZNL6 1462 aa15.55■□□□□ 0.08
UBE3B-203ENST00000434735 TEFQ10587 303 aa15.54■□□□□ 0.08
UBE3B-203ENST00000434735 CHMP4BQ9H444 224 aaKnown RBP15.54■□□□□ 0.08
UBE3B-203ENST00000434735 RAPGEF4Q8WZA2 1011 aa15.53■□□□□ 0.08
UBE3B-203ENST00000434735 CHMP4AQ9BY43 222 aa15.52■□□□□ 0.08
UBE3B-203ENST00000434735 SMARCA4P51532 1647 aa15.52■□□□□ 0.08
UBE3B-203ENST00000434735 RAD21O60216 631 aa15.51■□□□□ 0.07
UBE3B-203ENST00000434735 SLC4A10Q6U841 1118 aa15.51■□□□□ 0.07
UBE3B-203ENST00000434735 CALD1Q05682 793 aaKnown RBP15.51■□□□□ 0.07
UBE3B-203ENST00000434735 PDE3BQ13370 1112 aa15.51■□□□□ 0.07
UBE3B-203ENST00000434735 AMER1Q5JTC6 1135 aaPredicted RBP15.5■□□□□ 0.07
UBE3B-203ENST00000434735 TRIM34Q9BYJ4 488 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms