RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 ANP32CO43423 234 aa5.16□□□□□ -1.58
SHPRH-205ENST00000433355 KIAA1107Q9UPP5 1409 aa5.16□□□□□ -1.58
SHPRH-205ENST00000433355 PLEKHD1A6NEE1 506 aa5.15□□□□□ -1.58
SHPRH-205ENST00000433355 TSPY4P0CV99 314 aa5.15□□□□□ -1.59
SHPRH-205ENST00000433355 TSPY10P0CW01 314 aa5.15□□□□□ -1.59
SHPRH-205ENST00000433355 ARHGEF11O15085 1522 aa5.15□□□□□ -1.59
SHPRH-205ENST00000433355 RUSC2Q8N2Y8 1516 aa5.14□□□□□ -1.59
SHPRH-205ENST00000433355 PLXNC1O60486 1568 aa5.14□□□□□ -1.59
SHPRH-205ENST00000433355 IL27Q8NEV9 243 aa5.14□□□□□ -1.59
SHPRH-205ENST00000433355 URB2Q14146 1524 aaKnown RBP5.14□□□□□ -1.59
SHPRH-205ENST00000433355 PLPPR3Q6T4P5 718 aa5.14□□□□□ -1.59
SHPRH-205ENST00000433355 EIF4G3O43432 1585 aaKnown RBP5.13□□□□□ -1.59
SHPRH-205ENST00000433355 CHMP4BQ9H444 224 aaKnown RBP5.13□□□□□ -1.59
SHPRH-205ENST00000433355 CAMSAP2Q08AD1 1489 aa5.13□□□□□ -1.59
SHPRH-205ENST00000433355 HAP1P54257 671 aaPredicted RBP5.13□□□□□ -1.59
SHPRH-205ENST00000433355 UHRF1BP1LA0JNW5 1464 aa5.13□□□□□ -1.59
SHPRH-205ENST00000433355 CHMP7Q8WUX9 453 aaPredicted RBP5.13□□□□□ -1.59
SHPRH-205ENST00000433355 UHRF1BP1Q6BDS2 1440 aa5.13□□□□□ -1.59
SHPRH-205ENST00000433355 CHMP4AQ9BY43 222 aa5.13□□□□□ -1.59
SHPRH-205ENST00000433355 KDM5DQ9BY66 1539 aa5.13□□□□□ -1.59
SHPRH-205ENST00000433355 RTEL1-TNFRSF6BF6WH68 1400 aa5.12□□□□□ -1.59
SHPRH-205ENST00000433355 ERBINQ96RT1 1412 aa5.12□□□□□ -1.59
SHPRH-205ENST00000433355 MYO5CQ9NQX4 1742 aa5.12□□□□□ -1.59
SHPRH-205ENST00000433355 NEFMP07197 916 aa5.12□□□□□ -1.59
SHPRH-205ENST00000433355 LAMC1P11047 1609 aa5.11□□□□□ -1.59
SHPRH-205ENST00000433355 DHX57Q6P158 1386 aaKnown RBP5.11□□□□□ -1.59
SHPRH-205ENST00000433355 NINLQ9Y2I6 1382 aa5.11□□□□□ -1.59
SHPRH-205ENST00000433355 RAB3GAP2Q9H2M9 1393 aa5.11□□□□□ -1.59
SHPRH-205ENST00000433355 MAST1Q9Y2H9 1570 aa5.11□□□□□ -1.59
SHPRH-205ENST00000433355 CROCC2H7BZ55 1655 aa5.11□□□□□ -1.59
SHPRH-205ENST00000433355 CFDP1Q9UEE9 299 aaPredicted RBP5.11□□□□□ -1.59
SHPRH-205ENST00000433355 EIF4G2P78344 907 aaKnown RBP eCLIP5.1□□□□□ -1.59
SHPRH-205ENST00000433355 FHOD3Q2V2M9 1422 aa5.1□□□□□ -1.59
SHPRH-205ENST00000433355 DNAJC5BQ9UF47 199 aa5.1□□□□□ -1.59
SHPRH-205ENST00000433355 KAT6BQ8WYB5 2073 aa5.1□□□□□ -1.59
SHPRH-205ENST00000433355 CFAP44Q96MT7 982 aa5.1□□□□□ -1.59
SHPRH-205ENST00000433355 CCDC144AA2RUR9 1427 aa5.1□□□□□ -1.59
SHPRH-205ENST00000433355 RPRD2Q5VT52 1461 aaKnown RBP5.09□□□□□ -1.59
SHPRH-205ENST00000433355 ANKRD30BQ9BXX2 1392 aa5.09□□□□□ -1.59
SHPRH-205ENST00000433355 SHROOM2Q13796 1616 aa5.09□□□□□ -1.59
SHPRH-205ENST00000433355 ATP10AO60312 1499 aa5.09□□□□□ -1.59
SHPRH-205ENST00000433355 PDE3BQ13370 1112 aa5.09□□□□□ -1.59
SHPRH-205ENST00000433355 DUOX2Q9NRD8 1548 aa5.09□□□□□ -1.6
SHPRH-205ENST00000433355 FAM50AQ14320 339 aaKnown RBP5.08□□□□□ -1.6
SHPRH-205ENST00000433355 RALBP1Q15311 655 aa5.08□□□□□ -1.6
SHPRH-205ENST00000433355 PTPRGP23470 1445 aa5.08□□□□□ -1.6
SHPRH-205ENST00000433355 MAPKBP1O60336 1514 aa5.08□□□□□ -1.6
SHPRH-205ENST00000433355 ANKRD50Q9ULJ7 1429 aa5.08□□□□□ -1.6
SHPRH-205ENST00000433355 PREX2Q70Z35 1606 aa5.08□□□□□ -1.6
SHPRH-205ENST00000433355 ANP32EQ9BTT0 268 aa5.07□□□□□ -1.6
SHPRH-205ENST00000433355 MS4A1P11836 297 aa5.07□□□□□ -1.6
SHPRH-205ENST00000433355 PLB1Q6P1J6 1458 aa5.07□□□□□ -1.6
SHPRH-205ENST00000433355 NAIPQ13075 1403 aa5.06□□□□□ -1.6
SHPRH-205ENST00000433355 PPP6R1Q9UPN7 881 aa5.06□□□□□ -1.6
SHPRH-205ENST00000433355 C9orf84Q5VXU9 1444 aa5.06□□□□□ -1.6
SHPRH-205ENST00000433355 EFCAB2Q5VUJ9 269 aa5.06□□□□□ -1.6
SHPRH-205ENST00000433355 NPM1P06748 294 aaKnown RBP eCLIP5.06□□□□□ -1.6
SHPRH-205ENST00000433355 PRDM15P57071 1507 aaPredicted RBP5.06□□□□□ -1.6
SHPRH-205ENST00000433355 HNRNPUL2Q1KMD3 747 aaKnown RBP5.06□□□□□ -1.6
SHPRH-205ENST00000433355 KIAA1210Q9ULL0 1709 aa5.05□□□□□ -1.6
SHPRH-205ENST00000433355 UNC13BO14795 1591 aa5.05□□□□□ -1.6
SHPRH-205ENST00000433355 NEO1Q92859 1461 aa5.05□□□□□ -1.6
SHPRH-205ENST00000433355 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.05□□□□□ -1.6
SHPRH-205ENST00000433355 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.05□□□□□ -1.6
SHPRH-205ENST00000433355 ZC3H13Q5T200 1668 aaKnown RBP5.05□□□□□ -1.6
SHPRH-205ENST00000433355 ABCA8O94911 1581 aa5.05□□□□□ -1.6
SHPRH-205ENST00000433355 SBNO2Q9Y2G9 1366 aa5.05□□□□□ -1.6
SHPRH-205ENST00000433355 RALGAPBQ86X10 1494 aa5.05□□□□□ -1.6
SHPRH-205ENST00000433355 NUP153P49790 1475 aaKnown RBP5.04□□□□□ -1.6
SHPRH-205ENST00000433355 KIF15Q9NS87 1388 aa5.04□□□□□ -1.6
SHPRH-205ENST00000433355 NSD2O96028 1365 aa5.04□□□□□ -1.6
SHPRH-205ENST00000433355 NCOA1Q15788 1441 aa5.04□□□□□ -1.6
SHPRH-205ENST00000433355 TDRD9Q8NDG6 1382 aaKnown RBP5.04□□□□□ -1.6
SHPRH-205ENST00000433355 NPC1L1Q9UHC9 1359 aa5.04□□□□□ -1.6
SHPRH-205ENST00000433355 HDGFP51858 240 aaKnown RBP5.04□□□□□ -1.6
SHPRH-205ENST00000433355 MAGI2Q86UL8 1455 aa5.03□□□□□ -1.6
SHPRH-205ENST00000433355 PUS7Q96PZ0 661 aaKnown RBP5.03□□□□□ -1.6
SHPRH-205ENST00000433355 IQGAP3Q86VI3 1631 aa5.03□□□□□ -1.6
SHPRH-205ENST00000433355 NCBP3Q53F19 620 aaKnown RBP5.03□□□□□ -1.6
SHPRH-205ENST00000433355 PNNQ9H307 717 aaKnown RBP5.03□□□□□ -1.6
SHPRH-205ENST00000433355 ABCC10Q5T3U5 1492 aa5.03□□□□□ -1.6
SHPRH-205ENST00000433355 TET3O43151 1660 aa5.03□□□□□ -1.6
SHPRH-205ENST00000433355 RPGRIP1LQ68CZ1 1315 aa5.03□□□□□ -1.6
SHPRH-205ENST00000433355 CCDC7Q96M83 1385 aa5.03□□□□□ -1.6
SHPRH-205ENST00000433355 ZMYM3Q14202 1370 aa5.02□□□□□ -1.61
SHPRH-205ENST00000433355 BCORL1Q5H9F3 1711 aa5.02□□□□□ -1.61
SHPRH-205ENST00000433355 ZNF518AQ6AHZ1 1483 aa5.02□□□□□ -1.61
SHPRH-205ENST00000433355 ZBED9Q6R2W3 1325 aa5.02□□□□□ -1.61
SHPRH-205ENST00000433355 KDM5BQ9UGL1 1544 aa5.02□□□□□ -1.61
SHPRH-205ENST00000433355 CDK13Q14004 1512 aaKnown RBP5.02□□□□□ -1.61
SHPRH-205ENST00000433355 BRD4O60885 1362 aaPredicted RBP5.02□□□□□ -1.61
SHPRH-205ENST00000433355 SLC4A1APQ9BWU0 796 aaKnown RBP5.01□□□□□ -1.61
SHPRH-205ENST00000433355 DISP1Q96F81 1524 aa5.01□□□□□ -1.61
SHPRH-205ENST00000433355 PPP1R15AO75807 674 aaPredicted RBP5.01□□□□□ -1.61
SHPRH-205ENST00000433355 GPRASP1Q5JY77 1395 aa5.01□□□□□ -1.61
SHPRH-205ENST00000433355 CALD1Q05682 793 aaKnown RBP5□□□□□ -1.61
SHPRH-205ENST00000433355 ARHGAP5Q13017 1502 aa5□□□□□ -1.61
SHPRH-205ENST00000433355 DAXXQ9UER7 740 aaPredicted RBP5□□□□□ -1.61
SHPRH-205ENST00000433355 CT47B1P0C2W7 299 aaPredicted RBP5□□□□□ -1.61
SHPRH-205ENST00000433355 SYNMO15061 1565 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms