RNA–Protein interactions for RNA: ENST00000431927.5

TTC39A-210, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 5

Gene TTC39A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-210ENST00000431927 NUP153P49790 1475 aaKnown RBP16.69■□□□□ 0.26
TTC39A-210ENST00000431927 DMRT2Q9Y5R5 561 aa16.69■□□□□ 0.26
TTC39A-210ENST00000431927 IQSEC2Q5JU85 1478 aa16.68■□□□□ 0.26
TTC39A-210ENST00000431927 MAGI2Q86UL8 1455 aa16.67■□□□□ 0.26
TTC39A-210ENST00000431927 HECW1Q76N89 1606 aa16.66■□□□□ 0.26
TTC39A-210ENST00000431927 ARHGEF12Q9NZN5 1544 aa16.65■□□□□ 0.26
TTC39A-210ENST00000431927 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.65■□□□□ 0.26
TTC39A-210ENST00000431927 HNRNPUL2Q1KMD3 747 aaKnown RBP16.65■□□□□ 0.26
TTC39A-210ENST00000431927 LTBP4Q8N2S1 1624 aa16.65■□□□□ 0.26
TTC39A-210ENST00000431927 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.65■□□□□ 0.26
TTC39A-210ENST00000431927 MLECQ14165 292 aa16.63■□□□□ 0.25
TTC39A-210ENST00000431927 PTPRTO14522 1441 aa16.62■□□□□ 0.25
TTC39A-210ENST00000431927 CEP162Q5TB80 1403 aa16.61■□□□□ 0.25
TTC39A-210ENST00000431927 SETD1BQ9UPS6 1966 aaKnown RBP16.57■□□□□ 0.24
TTC39A-210ENST00000431927 CLIP1P30622 1438 aa16.57■□□□□ 0.24
TTC39A-210ENST00000431927 C9orf84Q5VXU9 1444 aa16.57■□□□□ 0.24
TTC39A-210ENST00000431927 UHRF1BP1Q6BDS2 1440 aa16.57■□□□□ 0.24
TTC39A-210ENST00000431927 ATP10AO60312 1499 aa16.56■□□□□ 0.24
TTC39A-210ENST00000431927 PLEKHD1A6NEE1 506 aa16.55■□□□□ 0.24
TTC39A-210ENST00000431927 CEBPAP49715 358 aaPredicted RBP16.55■□□□□ 0.24
TTC39A-210ENST00000431927 SCAPERQ9BY12 1400 aa16.54■□□□□ 0.24
TTC39A-210ENST00000431927 EHMT2Q96KQ7 1210 aa16.52■□□□□ 0.24
TTC39A-210ENST00000431927 C3P01024 1663 aa16.5■□□□□ 0.23
TTC39A-210ENST00000431927 PLCH2O75038 1416 aa16.5■□□□□ 0.23
TTC39A-210ENST00000431927 MYO5CQ9NQX4 1742 aa16.48■□□□□ 0.23
TTC39A-210ENST00000431927 MED1Q15648 1581 aaPredicted RBP16.47■□□□□ 0.23
TTC39A-210ENST00000431927 CDK13Q14004 1512 aaKnown RBP16.47■□□□□ 0.23
TTC39A-210ENST00000431927 ARHGAP35Q9NRY4 1499 aa16.47■□□□□ 0.23
TTC39A-210ENST00000431927 KDM5CP41229 1560 aa16.46■□□□□ 0.23
TTC39A-210ENST00000431927 REREQ9P2R6 1566 aa16.45■□□□□ 0.22
TTC39A-210ENST00000431927 DIP2CQ9Y2E4 1556 aa16.45■□□□□ 0.22
TTC39A-210ENST00000431927 ZNF518AQ6AHZ1 1483 aa16.44■□□□□ 0.22
TTC39A-210ENST00000431927 NCOA1Q15788 1441 aa16.44■□□□□ 0.22
TTC39A-210ENST00000431927 VPS8Q8N3P4 1428 aa16.43■□□□□ 0.22
TTC39A-210ENST00000431927 ABCA6Q8N139 1617 aa16.42■□□□□ 0.22
TTC39A-210ENST00000431927 UBAP1LF5GYI3 381 aa16.41■□□□□ 0.22
TTC39A-210ENST00000431927 RANGAP1P46060 587 aaPredicted RBP16.41■□□□□ 0.22
TTC39A-210ENST00000431927 FMN1Q68DA7 1419 aa16.41■□□□□ 0.22
TTC39A-210ENST00000431927 TRAPPC8Q9Y2L5 1435 aa16.39■□□□□ 0.21
TTC39A-210ENST00000431927 KIF14Q15058 1648 aa16.39■□□□□ 0.21
TTC39A-210ENST00000431927 EFCAB2Q5VUJ9 269 aa16.39■□□□□ 0.21
TTC39A-210ENST00000431927 AGLP35573 1532 aa16.38■□□□□ 0.21
TTC39A-210ENST00000431927 CAMSAP1Q5T5Y3 1602 aa16.37■□□□□ 0.21
TTC39A-210ENST00000431927 ARHGAP5Q13017 1502 aa16.35■□□□□ 0.21
TTC39A-210ENST00000431927 AFAP1Q8N556 730 aa16.35■□□□□ 0.21
TTC39A-210ENST00000431927 MAP3K1Q13233 1512 aa16.35■□□□□ 0.21
TTC39A-210ENST00000431927 MLH3Q9UHC1 1453 aa16.34■□□□□ 0.21
TTC39A-210ENST00000431927 ZNF335Q9H4Z2 1342 aaPredicted RBP16.33■□□□□ 0.2
TTC39A-210ENST00000431927 MROH2AA6NES4 1674 aa16.33■□□□□ 0.2
TTC39A-210ENST00000431927 CASKIN1Q8WXD9 1431 aa16.32■□□□□ 0.2
TTC39A-210ENST00000431927 CNTLNQ9NXG0 1405 aa16.32■□□□□ 0.2
TTC39A-210ENST00000431927 HSPA1LP34931 641 aa16.31■□□□□ 0.2
TTC39A-210ENST00000431927 ESF1Q9H501 851 aaKnown RBP16.31■□□□□ 0.2
TTC39A-210ENST00000431927 CDC42BPBQ9Y5S2 1711 aa16.31■□□□□ 0.2
TTC39A-210ENST00000431927 ZNF142P52746 1687 aaPredicted RBP16.3■□□□□ 0.2
TTC39A-210ENST00000431927 NPATQ14207 1427 aa16.3■□□□□ 0.2
TTC39A-210ENST00000431927 APLP2Q06481 763 aa16.3■□□□□ 0.2
TTC39A-210ENST00000431927 KIDINS220Q9ULH0 1771 aa16.29■□□□□ 0.2
TTC39A-210ENST00000431927 MYT1LQ9UL68 1186 aa16.29■□□□□ 0.2
TTC39A-210ENST00000431927 ITSN2Q9NZM3 1697 aa16.29■□□□□ 0.2
TTC39A-210ENST00000431927 ABCC1P33527 1531 aa16.29■□□□□ 0.2
TTC39A-210ENST00000431927 MYO3AQ8NEV4 1616 aa16.28■□□□□ 0.2
TTC39A-210ENST00000431927 FYCO1Q9BQS8 1478 aa16.28■□□□□ 0.2
TTC39A-210ENST00000431927 SUPT6HQ7KZ85 1726 aaKnown RBP16.28■□□□□ 0.2
TTC39A-210ENST00000431927 TROQ12816 1431 aaPredicted RBP16.28■□□□□ 0.2
TTC39A-210ENST00000431927 PLA2R1Q13018 1463 aa16.27■□□□□ 0.19
TTC39A-210ENST00000431927 PREX2Q70Z35 1606 aa16.27■□□□□ 0.19
TTC39A-210ENST00000431927 NCKAP5LQ9HCH0 1330 aa16.25■□□□□ 0.19
TTC39A-210ENST00000431927 TCOF1Q13428 1488 aaKnown RBP16.25■□□□□ 0.19
TTC39A-210ENST00000431927 LRRIQ1Q96JM4 1722 aa16.25■□□□□ 0.19
TTC39A-210ENST00000431927 CDK11AQ9UQ88 783 aaPredicted RBP16.24■□□□□ 0.19
TTC39A-210ENST00000431927 CEP170BQ9Y4F5 1589 aaPredicted RBP16.24■□□□□ 0.19
TTC39A-210ENST00000431927 PHF23Q9BUL5 403 aaPredicted RBP16.22■□□□□ 0.19
TTC39A-210ENST00000431927 CLTCQ00610 1675 aaKnown RBP16.21■□□□□ 0.19
TTC39A-210ENST00000431927 ATP1B4Q9UN42 357 aaPredicted RBP16.21■□□□□ 0.19
TTC39A-210ENST00000431927 PKD2Q13563 968 aa16.2■□□□□ 0.18
TTC39A-210ENST00000431927 ZMYM3Q14202 1370 aa16.2■□□□□ 0.18
TTC39A-210ENST00000431927 CCDC18Q5T9S5 1454 aa16.19■□□□□ 0.18
TTC39A-210ENST00000431927 SAMD9LQ8IVG5 1584 aa16.18■□□□□ 0.18
TTC39A-210ENST00000431927 CDC42BPAQ5VT25 1732 aa16.17■□□□□ 0.18
TTC39A-210ENST00000431927 TOM1O60784 492 aa16.17■□□□□ 0.18
TTC39A-210ENST00000431927 PIP4K2BP78356 416 aa16.16■□□□□ 0.18
TTC39A-210ENST00000431927 PPP6R1Q9UPN7 881 aa16.16■□□□□ 0.18
TTC39A-210ENST00000431927 PTPRKQ15262 1439 aa16.16■□□□□ 0.18
TTC39A-210ENST00000431927 PLXNC1O60486 1568 aa16.16■□□□□ 0.18
TTC39A-210ENST00000431927 SCAF1Q9H7N4 1312 aaKnown RBP16.16■□□□□ 0.18
TTC39A-210ENST00000431927 POLR1AO95602 1720 aaPredicted RBP16.15■□□□□ 0.18
TTC39A-210ENST00000431927 ALKQ9UM73 1620 aa16.15■□□□□ 0.18
TTC39A-210ENST00000431927 CPS1P31327 1500 aa16.14■□□□□ 0.18
TTC39A-210ENST00000431927 TIAM1Q13009 1591 aa16.13■□□□□ 0.17
TTC39A-210ENST00000431927 NEURL4Q96JN8 1562 aa16.13■□□□□ 0.17
TTC39A-210ENST00000431927 DNMT1P26358 1616 aaKnown RBP16.12■□□□□ 0.17
TTC39A-210ENST00000431927 RGS17Q9UGC6 210 aaPredicted RBP16.12■□□□□ 0.17
TTC39A-210ENST00000431927 SYCP2Q9BX26 1530 aa16.12■□□□□ 0.17
TTC39A-210ENST00000431927 A2ML1A8K2U0 1454 aa16.11■□□□□ 0.17
TTC39A-210ENST00000431927 ATP7AQ04656 1500 aa16.11■□□□□ 0.17
TTC39A-210ENST00000431927 INO80Q9ULG1 1556 aaPredicted RBP16.11■□□□□ 0.17
TTC39A-210ENST00000431927 LRRC9Q6ZRR7 1453 aa16.1■□□□□ 0.17
TTC39A-210ENST00000431927 SHANK2Q9UPX8 1470 aa16.1■□□□□ 0.17
TTC39A-210ENST00000431927 TRIM26Q12899 539 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms