RNA–Protein interactions for RNA: ENST00000430644.5

PCGF3-205, Transcript of polycomb group ring finger 3, humanhuman

TSL 2

Gene PCGF3, Length 2,621 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-205ENST00000430644 CHIC2Q9UKJ5 165 aa23.61■■□□□ 1.37
PCGF3-205ENST00000430644 WDR62O43379 1518 aa23.61■■□□□ 1.37
PCGF3-205ENST00000430644 IL27Q8NEV9 243 aa23.61■■□□□ 1.37
PCGF3-205ENST00000430644 RNF123Q5XPI4 1314 aa23.6■■□□□ 1.37
PCGF3-205ENST00000430644 NUDCQ9Y266 331 aa23.6■■□□□ 1.37
PCGF3-205ENST00000430644 THOC2Q8NI27 1593 aaKnown RBP23.59■■□□□ 1.37
PCGF3-205ENST00000430644 KIF7Q2M1P5 1343 aa23.58■■□□□ 1.37
PCGF3-205ENST00000430644 TARBP1Q13395 1621 aaKnown RBP23.58■■□□□ 1.37
PCGF3-205ENST00000430644 FOXD1Q16676 465 aa23.57■■□□□ 1.36
PCGF3-205ENST00000430644 NBPF8Q3BBV2 869 aa23.55■■□□□ 1.36
PCGF3-205ENST00000430644 SENP3-EIF4A1A0A087X0R7 540 aa23.54■■□□□ 1.36
PCGF3-205ENST00000430644 CNGB1Q14028 1251 aaPredicted RBP23.54■■□□□ 1.36
PCGF3-205ENST00000430644 MPHOSPH9Q99550 1183 aa23.54■■□□□ 1.36
PCGF3-205ENST00000430644 GAPVD1Q14C86 1478 aa23.54■■□□□ 1.36
PCGF3-205ENST00000430644 ZNF608Q9ULD9 1512 aaPredicted RBP23.54■■□□□ 1.36
PCGF3-205ENST00000430644 HECW1Q76N89 1606 aa23.53■■□□□ 1.36
PCGF3-205ENST00000430644 RTN4Q9NQC3 1192 aaKnown RBP23.52■■□□□ 1.36
PCGF3-205ENST00000430644 KDM6BO15054 1643 aa23.51■■□□□ 1.35
PCGF3-205ENST00000430644 LRRIQ1Q96JM4 1722 aa23.5■■□□□ 1.35
PCGF3-205ENST00000430644 SPATA31E1Q6ZUB1 1445 aa23.49■■□□□ 1.35
PCGF3-205ENST00000430644 ABCA5Q8WWZ7 1642 aa23.48■■□□□ 1.35
PCGF3-205ENST00000430644 NPM2Q86SE8 214 aaKnown RBP23.47■■□□□ 1.35
PCGF3-205ENST00000430644 SUPT6HQ7KZ85 1726 aaKnown RBP23.46■■□□□ 1.35
PCGF3-205ENST00000430644 IFT140Q96RY7 1462 aa23.46■■□□□ 1.35
PCGF3-205ENST00000430644 GCC2Q8IWJ2 1684 aa23.45■■□□□ 1.34
PCGF3-205ENST00000430644 CTTNBP2Q8WZ74 1663 aa23.44■■□□□ 1.34
PCGF3-205ENST00000430644 DHX29Q7Z478 1369 aaKnown RBP23.44■■□□□ 1.34
PCGF3-205ENST00000430644 LAS1LQ9Y4W2 734 aaKnown RBP23.44■■□□□ 1.34
PCGF3-205ENST00000430644 GRIN2BQ13224 1484 aa23.42■■□□□ 1.34
PCGF3-205ENST00000430644 UGGT2Q9NYU1 1516 aa23.42■■□□□ 1.34
PCGF3-205ENST00000430644 NEFMP07197 916 aa23.41■■□□□ 1.34
PCGF3-205ENST00000430644 EHBP1L1Q8N3D4 1523 aa23.41■■□□□ 1.34
PCGF3-205ENST00000430644 TEX14Q8IWB6 1497 aa23.39■■□□□ 1.34
PCGF3-205ENST00000430644 ANKRD30BQ9BXX2 1392 aa23.39■■□□□ 1.33
PCGF3-205ENST00000430644 RPRD2Q5VT52 1461 aaKnown RBP23.39■■□□□ 1.33
PCGF3-205ENST00000430644 ARHGEF11O15085 1522 aa23.38■■□□□ 1.33
PCGF3-205ENST00000430644 MAGI3Q5TCQ9 1506 aa23.38■■□□□ 1.33
PCGF3-205ENST00000430644 TCOF1Q13428 1488 aaKnown RBP23.38■■□□□ 1.33
PCGF3-205ENST00000430644 POLR3GLQ9BT43 218 aa23.37■■□□□ 1.33
PCGF3-205ENST00000430644 POLR1AO95602 1720 aaPredicted RBP23.37■■□□□ 1.33
PCGF3-205ENST00000430644 PNISRQ8TF01 805 aaKnown RBP23.36■■□□□ 1.33
PCGF3-205ENST00000430644 PDE4AP27815 886 aa23.34■■□□□ 1.33
PCGF3-205ENST00000430644 USP35Q9P2H5 1018 aa23.34■■□□□ 1.33
PCGF3-205ENST00000430644 CUL7Q14999 1698 aa23.34■■□□□ 1.33
PCGF3-205ENST00000430644 PBRM1Q86U86 1689 aa23.34■■□□□ 1.33
PCGF3-205ENST00000430644 SAMD9Q5K651 1589 aa23.33■■□□□ 1.33
PCGF3-205ENST00000430644 TCERG1O14776 1098 aaKnown RBP23.33■■□□□ 1.33
PCGF3-205ENST00000430644 EXOC6Q8TAG9 804 aa23.33■■□□□ 1.33
PCGF3-205ENST00000430644 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.33■■□□□ 1.33
PCGF3-205ENST00000430644 EIF4G3O43432 1585 aaKnown RBP23.32■■□□□ 1.32
PCGF3-205ENST00000430644 WASHC2CQ9Y4E1 1318 aa23.3■■□□□ 1.32
PCGF3-205ENST00000430644 RRP1P56182 461 aaKnown RBP23.29■■□□□ 1.32
PCGF3-205ENST00000430644 TMC1Q8TDI8 760 aa23.29■■□□□ 1.32
PCGF3-205ENST00000430644 BACH2Q9BYV9 841 aa23.29■■□□□ 1.32
PCGF3-205ENST00000430644 FBLN2P98095 1184 aa23.29■■□□□ 1.32
PCGF3-205ENST00000430644 MIA2Q96PC5 1412 aa23.28■■□□□ 1.32
PCGF3-205ENST00000430644 SLC4A1APQ9BWU0 796 aaKnown RBP23.25■■□□□ 1.31
PCGF3-205ENST00000430644 BCORL1Q5H9F3 1711 aa23.25■■□□□ 1.31
PCGF3-205ENST00000430644 PPM1GO15355 546 aaPredicted RBP23.24■■□□□ 1.31
PCGF3-205ENST00000430644 USP47Q96K76 1375 aa23.23■■□□□ 1.31
PCGF3-205ENST00000430644 MS4A1P11836 297 aa23.21■■□□□ 1.31
PCGF3-205ENST00000430644 ZNF326Q5BKZ1 582 aaKnown RBP23.2■■□□□ 1.3
PCGF3-205ENST00000430644 RCAN3Q9UKA8 241 aa23.2■■□□□ 1.3
PCGF3-205ENST00000430644 BRPF3Q9ULD4 1205 aa23.2■■□□□ 1.3
PCGF3-205ENST00000430644 LRPPRCP42704 1394 aaKnown RBP23.2■■□□□ 1.3
PCGF3-205ENST00000430644 ADAMTS12P58397 1594 aa23.19■■□□□ 1.3
PCGF3-205ENST00000430644 CHMP7Q8WUX9 453 aaPredicted RBP23.17■■□□□ 1.3
PCGF3-205ENST00000430644 SKAP1Q86WV1 359 aa23.15■■□□□ 1.3
PCGF3-205ENST00000430644 ARID3CA6NKF2 412 aa23.14■■□□□ 1.3
PCGF3-205ENST00000430644 ARID4BQ4LE39 1312 aaPredicted RBP23.14■■□□□ 1.29
PCGF3-205ENST00000430644 ROCK1Q13464 1354 aa23.13■■□□□ 1.29
PCGF3-205ENST00000430644 GSE1Q14687 1217 aa23.13■■□□□ 1.29
PCGF3-205ENST00000430644 DAPK1P53355 1430 aa23.13■■□□□ 1.29
PCGF3-205ENST00000430644 MBD5Q9P267 1494 aa23.13■■□□□ 1.29
PCGF3-205ENST00000430644 EPRSP07814 1512 aaKnown RBP23.11■■□□□ 1.29
PCGF3-205ENST00000430644 KIF15Q9NS87 1388 aa23.1■■□□□ 1.29
PCGF3-205ENST00000430644 CDK13Q14004 1512 aaKnown RBP23.1■■□□□ 1.29
PCGF3-205ENST00000430644 ABCC5O15440 1437 aa23.1■■□□□ 1.29
PCGF3-205ENST00000430644 BRD4O60885 1362 aaPredicted RBP23.1■■□□□ 1.29
PCGF3-205ENST00000430644 NFKBIBQ15653 356 aa23.09■■□□□ 1.29
PCGF3-205ENST00000430644 MYBBP1AQ9BQG0 1328 aaKnown RBP23.09■■□□□ 1.29
PCGF3-205ENST00000430644 ZNF644Q9H582 1327 aaPredicted RBP23.09■■□□□ 1.29
PCGF3-205ENST00000430644 ROCK2O75116 1388 aaKnown RBP23.09■■□□□ 1.29
PCGF3-205ENST00000430644 KDM5CP41229 1560 aa23.08■■□□□ 1.29
PCGF3-205ENST00000430644 DDRGK1Q96HY6 314 aa23.08■■□□□ 1.28
PCGF3-205ENST00000430644 PLIN1O60240 522 aa23.07■■□□□ 1.28
PCGF3-205ENST00000430644 SLC4A3P48751 1232 aa23.07■■□□□ 1.28
PCGF3-205ENST00000430644 PZPP20742 1482 aa23.06■■□□□ 1.28
PCGF3-205ENST00000430644 CDCA7LQ96GN5 454 aa23.06■■□□□ 1.28
PCGF3-205ENST00000430644 GRIN2AQ12879 1464 aa23.05■■□□□ 1.28
PCGF3-205ENST00000430644 MAGI1Q96QZ7 1491 aaPredicted RBP23.05■■□□□ 1.28
PCGF3-205ENST00000430644 FRAT1Q92837 279 aaPredicted RBP23.04■■□□□ 1.28
PCGF3-205ENST00000430644 RALBP1Q15311 655 aa23.03■■□□□ 1.28
PCGF3-205ENST00000430644 SYNJ2O15056 1496 aa23.02■■□□□ 1.28
PCGF3-205ENST00000430644 KIF14Q15058 1648 aa23.02■■□□□ 1.28
PCGF3-205ENST00000430644 UBE2Q2Q8WVN8 375 aa23.02■■□□□ 1.28
PCGF3-205ENST00000430644 PDE3BQ13370 1112 aa23.01■■□□□ 1.27
PCGF3-205ENST00000430644 CRBNQ96SW2 442 aa23.01■■□□□ 1.27
PCGF3-205ENST00000430644 DNMT1P26358 1616 aaKnown RBP23.01■■□□□ 1.27
PCGF3-205ENST00000430644 CARD11Q9BXL7 1154 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms