RNA–Protein interactions for RNA: ENST00000430081.5

OPTN-208, Transcript of optineurin, humanhuman

TSL 5

Gene OPTN, Length 848 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-208ENST00000430081 TTC37Q6PGP7 1564 aa17.11■□□□□ 0.33
OPTN-208ENST00000430081 CDK11AQ9UQ88 783 aaPredicted RBP17.11■□□□□ 0.33
OPTN-208ENST00000430081 ATP10AO60312 1499 aa17.1■□□□□ 0.33
OPTN-208ENST00000430081 HECW1Q76N89 1606 aa17.1■□□□□ 0.33
OPTN-208ENST00000430081 MYT1LQ9UL68 1186 aa17.09■□□□□ 0.33
OPTN-208ENST00000430081 CDK13Q14004 1512 aaKnown RBP17.08■□□□□ 0.32
OPTN-208ENST00000430081 DMRT2Q9Y5R5 561 aa17.08■□□□□ 0.32
OPTN-208ENST00000430081 C9orf84Q5VXU9 1444 aa17.07■□□□□ 0.32
OPTN-208ENST00000430081 CEBPAP49715 358 aaPredicted RBP17.07■□□□□ 0.32
OPTN-208ENST00000430081 UBTFP17480 764 aaKnown RBP17.06■□□□□ 0.32
OPTN-208ENST00000430081 EHMT2Q96KQ7 1210 aa17.04■□□□□ 0.32
OPTN-208ENST00000430081 FMN1Q68DA7 1419 aa17.04■□□□□ 0.32
OPTN-208ENST00000430081 ARHGEF12Q9NZN5 1544 aa17.03■□□□□ 0.32
OPTN-208ENST00000430081 AFAP1Q8N556 730 aa17.03■□□□□ 0.32
OPTN-208ENST00000430081 SIGLEC1Q9BZZ2 1709 aa17.02■□□□□ 0.32
OPTN-208ENST00000430081 FER1L4A9Z1Z3 1794 aa17.02■□□□□ 0.31
OPTN-208ENST00000430081 ESF1Q9H501 851 aaKnown RBP17.01■□□□□ 0.31
OPTN-208ENST00000430081 ZNF518AQ6AHZ1 1483 aa16.99■□□□□ 0.31
OPTN-208ENST00000430081 UHRF1BP1Q6BDS2 1440 aa16.99■□□□□ 0.31
OPTN-208ENST00000430081 CLIP1P30622 1438 aa16.98■□□□□ 0.31
OPTN-208ENST00000430081 ARHGAP5Q13017 1502 aa16.97■□□□□ 0.31
OPTN-208ENST00000430081 DISP3Q9P2K9 1392 aa16.97■□□□□ 0.31
OPTN-208ENST00000430081 TROQ12816 1431 aaPredicted RBP16.96■□□□□ 0.31
OPTN-208ENST00000430081 PREX1Q8TCU6 1659 aa16.95■□□□□ 0.3
OPTN-208ENST00000430081 KIF14Q15058 1648 aa16.94■□□□□ 0.3
OPTN-208ENST00000430081 ARHGAP35Q9NRY4 1499 aa16.93■□□□□ 0.3
OPTN-208ENST00000430081 MYO5CQ9NQX4 1742 aa16.93■□□□□ 0.3
OPTN-208ENST00000430081 KDM5CP41229 1560 aa16.9■□□□□ 0.3
OPTN-208ENST00000430081 PTPRTO14522 1441 aa16.9■□□□□ 0.3
OPTN-208ENST00000430081 MLH3Q9UHC1 1453 aa16.9■□□□□ 0.3
OPTN-208ENST00000430081 SOCS7O14512 581 aa16.89■□□□□ 0.29
OPTN-208ENST00000430081 ILDR2Q71H61 639 aa16.89■□□□□ 0.29
OPTN-208ENST00000430081 TRAPPC8Q9Y2L5 1435 aa16.88■□□□□ 0.29
OPTN-208ENST00000430081 REREQ9P2R6 1566 aa16.87■□□□□ 0.29
OPTN-208ENST00000430081 DIP2CQ9Y2E4 1556 aa16.87■□□□□ 0.29
OPTN-208ENST00000430081 CNTLNQ9NXG0 1405 aa16.86■□□□□ 0.29
OPTN-208ENST00000430081 STRCQ7RTU9 1775 aa16.85■□□□□ 0.29
OPTN-208ENST00000430081 AGLP35573 1532 aa16.85■□□□□ 0.29
OPTN-208ENST00000430081 ZNF777Q9ULD5 760 aaPredicted RBP16.83■□□□□ 0.28
OPTN-208ENST00000430081 ABCA6Q8N139 1617 aa16.81■□□□□ 0.28
OPTN-208ENST00000430081 SETD1BQ9UPS6 1966 aaKnown RBP16.81■□□□□ 0.28
OPTN-208ENST00000430081 ABCC1P33527 1531 aa16.8■□□□□ 0.28
OPTN-208ENST00000430081 CCDC18Q5T9S5 1454 aa16.8■□□□□ 0.28
OPTN-208ENST00000430081 NCOA1Q15788 1441 aa16.8■□□□□ 0.28
OPTN-208ENST00000430081 CASKIN1Q8WXD9 1431 aa16.79■□□□□ 0.28
OPTN-208ENST00000430081 C3P01024 1663 aa16.79■□□□□ 0.28
OPTN-208ENST00000430081 SPAG9O60271 1321 aaKnown RBP16.79■□□□□ 0.28
OPTN-208ENST00000430081 ZMYM3Q14202 1370 aa16.78■□□□□ 0.28
OPTN-208ENST00000430081 IQSEC2Q5JU85 1478 aa16.78■□□□□ 0.28
OPTN-208ENST00000430081 NPATQ14207 1427 aa16.78■□□□□ 0.28
OPTN-208ENST00000430081 CDC42BPBQ9Y5S2 1711 aa16.77■□□□□ 0.28
OPTN-208ENST00000430081 HNRNPMP52272 730 aaKnown RBP eCLIP16.77■□□□□ 0.28
OPTN-208ENST00000430081 PREX2Q70Z35 1606 aa16.77■□□□□ 0.27
OPTN-208ENST00000430081 NCKAP5LQ9HCH0 1330 aa16.76■□□□□ 0.27
OPTN-208ENST00000430081 LTBP4Q8N2S1 1624 aa16.76■□□□□ 0.27
OPTN-208ENST00000430081 CHIC1Q5VXU3 224 aa16.75■□□□□ 0.27
OPTN-208ENST00000430081 SPATA31D1Q6ZQQ2 1576 aa16.74■□□□□ 0.27
OPTN-208ENST00000430081 UBAP1LF5GYI3 381 aa16.74■□□□□ 0.27
OPTN-208ENST00000430081 ITSN2Q9NZM3 1697 aa16.73■□□□□ 0.27
OPTN-208ENST00000430081 PKD2Q13563 968 aa16.73■□□□□ 0.27
OPTN-208ENST00000430081 CFDP1Q9UEE9 299 aaPredicted RBP16.73■□□□□ 0.27
OPTN-208ENST00000430081 CAMSAP1Q5T5Y3 1602 aa16.73■□□□□ 0.27
OPTN-208ENST00000430081 KIDINS220Q9ULH0 1771 aa16.72■□□□□ 0.27
OPTN-208ENST00000430081 GGT6Q6P531 493 aa16.72■□□□□ 0.27
OPTN-208ENST00000430081 SAMD9LQ8IVG5 1584 aa16.72■□□□□ 0.27
OPTN-208ENST00000430081 ZNF335Q9H4Z2 1342 aaPredicted RBP16.71■□□□□ 0.27
OPTN-208ENST00000430081 LRRIQ1Q96JM4 1722 aa16.71■□□□□ 0.27
OPTN-208ENST00000430081 GPATCH8Q9UKJ3 1502 aaKnown RBP16.7■□□□□ 0.26
OPTN-208ENST00000430081 KIAA1107Q9UPP5 1409 aa16.69■□□□□ 0.26
OPTN-208ENST00000430081 PLEKHH2Q8IVE3 1493 aa16.68■□□□□ 0.26
OPTN-208ENST00000430081 FYCO1Q9BQS8 1478 aa16.68■□□□□ 0.26
OPTN-208ENST00000430081 PPP6R1Q9UPN7 881 aa16.68■□□□□ 0.26
OPTN-208ENST00000430081 SYCP2Q9BX26 1530 aa16.68■□□□□ 0.26
OPTN-208ENST00000430081 A2MP01023 1474 aa16.67■□□□□ 0.26
OPTN-208ENST00000430081 CCNB3Q8WWL7 1395 aa16.67■□□□□ 0.26
OPTN-208ENST00000430081 MROH2AA6NES4 1674 aa16.66■□□□□ 0.26
OPTN-208ENST00000430081 PLA2R1Q13018 1463 aa16.66■□□□□ 0.26
OPTN-208ENST00000430081 CDC42BPAQ5VT25 1732 aa16.65■□□□□ 0.26
OPTN-208ENST00000430081 PTPRKQ15262 1439 aa16.65■□□□□ 0.26
OPTN-208ENST00000430081 ATP7AQ04656 1500 aa16.65■□□□□ 0.26
OPTN-208ENST00000430081 MTUS2Q5JR59 1369 aa16.63■□□□□ 0.25
OPTN-208ENST00000430081 SUPT6HQ7KZ85 1726 aaKnown RBP16.62■□□□□ 0.25
OPTN-208ENST00000430081 TCOF1Q13428 1488 aaKnown RBP16.61■□□□□ 0.25
OPTN-208ENST00000430081 SCAF1Q9H7N4 1312 aaKnown RBP16.61■□□□□ 0.25
OPTN-208ENST00000430081 CEP170BQ9Y4F5 1589 aaPredicted RBP16.6■□□□□ 0.25
OPTN-208ENST00000430081 CLTCQ00610 1675 aaKnown RBP16.6■□□□□ 0.25
OPTN-208ENST00000430081 PLXNC1O60486 1568 aa16.6■□□□□ 0.25
OPTN-208ENST00000430081 MYO3AQ8NEV4 1616 aa16.59■□□□□ 0.25
OPTN-208ENST00000430081 TOM1O60784 492 aa16.58■□□□□ 0.24
OPTN-208ENST00000430081 PIP4K2BP78356 416 aa16.58■□□□□ 0.24
OPTN-208ENST00000430081 ZNF644Q9H582 1327 aaPredicted RBP16.58■□□□□ 0.24
OPTN-208ENST00000430081 INO80Q9ULG1 1556 aaPredicted RBP16.57■□□□□ 0.24
OPTN-208ENST00000430081 A2ML1A8K2U0 1454 aa16.56■□□□□ 0.24
OPTN-208ENST00000430081 DHX29Q7Z478 1369 aaKnown RBP16.56■□□□□ 0.24
OPTN-208ENST00000430081 ZNF142P52746 1687 aaPredicted RBP16.56■□□□□ 0.24
OPTN-208ENST00000430081 KIF3BO15066 747 aa16.55■□□□□ 0.24
OPTN-208ENST00000430081 RTEL1-TNFRSF6BF6WH68 1400 aa16.54■□□□□ 0.24
OPTN-208ENST00000430081 TNRQ92752 1358 aa16.54■□□□□ 0.24
OPTN-208ENST00000430081 HSPA1LP34931 641 aa16.54■□□□□ 0.24
OPTN-208ENST00000430081 FBXO31Q5XUX0 539 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms