RNA–Protein interactions for RNA: ENST00000429988.2

PCNX2-204, Transcript of pecanex 2, humanhuman

TSL 4

Gene PCNX2, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX2-204ENST00000429988 ZMYM4Q5VZL5 1548 aa15.69■□□□□ 0.1
PCNX2-204ENST00000429988 MAGI2Q86UL8 1455 aa15.69■□□□□ 0.1
PCNX2-204ENST00000429988 UBAP1LF5GYI3 381 aa15.68■□□□□ 0.1
PCNX2-204ENST00000429988 CFAP74Q9C0B2 1584 aa15.67■□□□□ 0.1
PCNX2-204ENST00000429988 ARHGEF12Q9NZN5 1544 aa15.67■□□□□ 0.1
PCNX2-204ENST00000429988 HECW1Q76N89 1606 aa15.61■□□□□ 0.09
PCNX2-204ENST00000429988 P3H3Q8IVL6 736 aa15.61■□□□□ 0.09
PCNX2-204ENST00000429988 MED1Q15648 1581 aaPredicted RBP15.61■□□□□ 0.09
PCNX2-204ENST00000429988 ATP10AO60312 1499 aa15.6■□□□□ 0.09
PCNX2-204ENST00000429988 C9orf84Q5VXU9 1444 aa15.59■□□□□ 0.09
PCNX2-204ENST00000429988 PLEKHD1A6NEE1 506 aa15.58■□□□□ 0.08
PCNX2-204ENST00000429988 PHF23Q9BUL5 403 aaPredicted RBP15.58■□□□□ 0.08
PCNX2-204ENST00000429988 RAPGEF6Q8TEU7 1601 aa15.57■□□□□ 0.08
PCNX2-204ENST00000429988 NCOA1Q15788 1441 aa15.56■□□□□ 0.08
PCNX2-204ENST00000429988 HSPA1LP34931 641 aa15.54■□□□□ 0.08
PCNX2-204ENST00000429988 SCAPERQ9BY12 1400 aa15.53■□□□□ 0.08
PCNX2-204ENST00000429988 ZNF335Q9H4Z2 1342 aaPredicted RBP15.53■□□□□ 0.08
PCNX2-204ENST00000429988 SCAF1Q9H7N4 1312 aaKnown RBP15.53■□□□□ 0.08
PCNX2-204ENST00000429988 ESF1Q9H501 851 aaKnown RBP15.53■□□□□ 0.08
PCNX2-204ENST00000429988 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.52■□□□□ 0.07
PCNX2-204ENST00000429988 TRAPPC8Q9Y2L5 1435 aa15.51■□□□□ 0.07
PCNX2-204ENST00000429988 C3P01024 1663 aa15.51■□□□□ 0.07
PCNX2-204ENST00000429988 NUP153P49790 1475 aaKnown RBP15.5■□□□□ 0.07
PCNX2-204ENST00000429988 PIP4K2BP78356 416 aa15.48■□□□□ 0.07
PCNX2-204ENST00000429988 CAMSAP1Q5T5Y3 1602 aa15.47■□□□□ 0.07
PCNX2-204ENST00000429988 MYT1LQ9UL68 1186 aa15.46■□□□□ 0.07
PCNX2-204ENST00000429988 NCKAP5LQ9HCH0 1330 aa15.45■□□□□ 0.06
PCNX2-204ENST00000429988 TOM1O60784 492 aa15.45■□□□□ 0.06
PCNX2-204ENST00000429988 SAMD9Q5K651 1589 aa15.44■□□□□ 0.06
PCNX2-204ENST00000429988 PLCH2O75038 1416 aa15.43■□□□□ 0.06
PCNX2-204ENST00000429988 PRXQ9BXM0 1461 aa15.42■□□□□ 0.06
PCNX2-204ENST00000429988 PKD2Q13563 968 aa15.42■□□□□ 0.06
PCNX2-204ENST00000429988 EFCAB2Q5VUJ9 269 aa15.42■□□□□ 0.06
PCNX2-204ENST00000429988 ZNF518AQ6AHZ1 1483 aa15.4■□□□□ 0.06
PCNX2-204ENST00000429988 CNTLNQ9NXG0 1405 aa15.4■□□□□ 0.06
PCNX2-204ENST00000429988 REREQ9P2R6 1566 aa15.39■□□□□ 0.05
PCNX2-204ENST00000429988 NPATQ14207 1427 aa15.38■□□□□ 0.05
PCNX2-204ENST00000429988 AGLP35573 1532 aa15.38■□□□□ 0.05
PCNX2-204ENST00000429988 AFAP1Q8N556 730 aa15.37■□□□□ 0.05
PCNX2-204ENST00000429988 PPP6R1Q9UPN7 881 aa15.37■□□□□ 0.05
PCNX2-204ENST00000429988 DIP2CQ9Y2E4 1556 aa15.36■□□□□ 0.05
PCNX2-204ENST00000429988 PLA2R1Q13018 1463 aa15.36■□□□□ 0.05
PCNX2-204ENST00000429988 KDM5CP41229 1560 aa15.35■□□□□ 0.05
PCNX2-204ENST00000429988 MYO5CQ9NQX4 1742 aa15.34■□□□□ 0.05
PCNX2-204ENST00000429988 SUPT6HQ7KZ85 1726 aaKnown RBP15.33■□□□□ 0.04
PCNX2-204ENST00000429988 TCOF1Q13428 1488 aaKnown RBP15.33■□□□□ 0.04
PCNX2-204ENST00000429988 CPS1P31327 1500 aa15.32■□□□□ 0.04
PCNX2-204ENST00000429988 RANGAP1P46060 587 aaPredicted RBP15.31■□□□□ 0.04
PCNX2-204ENST00000429988 PTPRKQ15262 1439 aa15.31■□□□□ 0.04
PCNX2-204ENST00000429988 ABCA6Q8N139 1617 aa15.31■□□□□ 0.04
PCNX2-204ENST00000429988 MROH2AA6NES4 1674 aa15.3■□□□□ 0.04
PCNX2-204ENST00000429988 ZMYM3Q14202 1370 aa15.3■□□□□ 0.04
PCNX2-204ENST00000429988 MLH3Q9UHC1 1453 aa15.3■□□□□ 0.04
PCNX2-204ENST00000429988 ZNF142P52746 1687 aaPredicted RBP15.28■□□□□ 0.04
PCNX2-204ENST00000429988 ARHGAP5Q13017 1502 aa15.27■□□□□ 0.04
PCNX2-204ENST00000429988 SENP3Q9H4L4 574 aaPredicted RBP15.27■□□□□ 0.04
PCNX2-204ENST00000429988 MYO3AQ8NEV4 1616 aa15.27■□□□□ 0.03
PCNX2-204ENST00000429988 CEP170BQ9Y4F5 1589 aaPredicted RBP15.27■□□□□ 0.03
PCNX2-204ENST00000429988 CDK13Q14004 1512 aaKnown RBP15.27■□□□□ 0.03
PCNX2-204ENST00000429988 RGS17Q9UGC6 210 aaPredicted RBP15.26■□□□□ 0.03
PCNX2-204ENST00000429988 SHANK2Q9UPX8 1470 aa15.26■□□□□ 0.03
PCNX2-204ENST00000429988 CDK11AQ9UQ88 783 aaPredicted RBP15.23■□□□□ 0.03
PCNX2-204ENST00000429988 KIF14Q15058 1648 aa15.19■□□□□ 0.02
PCNX2-204ENST00000429988 ALKQ9UM73 1620 aa15.19■□□□□ 0.02
PCNX2-204ENST00000429988 ATP1B4Q9UN42 357 aaPredicted RBP15.19■□□□□ 0.02
PCNX2-204ENST00000429988 CLTCQ00610 1675 aaKnown RBP15.19■□□□□ 0.02
PCNX2-204ENST00000429988 POLR1AO95602 1720 aaPredicted RBP15.17■□□□□ 0.02
PCNX2-204ENST00000429988 KIDINS220Q9ULH0 1771 aa15.17■□□□□ 0.02
PCNX2-204ENST00000429988 POTEAQ6S8J7 498 aa15.17■□□□□ 0.02
PCNX2-204ENST00000429988 A2ML1A8K2U0 1454 aa15.16■□□□□ 0.02
PCNX2-204ENST00000429988 DNMT1P26358 1616 aaKnown RBP15.15■□□□□ 0.02
PCNX2-204ENST00000429988 CSRNP3Q8WYN3 585 aa15.15■□□□□ 0.02
PCNX2-204ENST00000429988 CLIP1P30622 1438 aa15.15■□□□□ 0.02
PCNX2-204ENST00000429988 ABCC1P33527 1531 aa15.14■□□□□ 0.01
PCNX2-204ENST00000429988 NEURL4Q96JN8 1562 aa15.14■□□□□ 0.01
PCNX2-204ENST00000429988 ITSN2Q9NZM3 1697 aa15.13■□□□□ 0.01
PCNX2-204ENST00000429988 TROQ12816 1431 aaPredicted RBP15.13■□□□□ 0.01
PCNX2-204ENST00000429988 ANKLE2Q86XL3 938 aa15.13■□□□□ 0.01
PCNX2-204ENST00000429988 VWDEQ8N2E2 1590 aa15.13■□□□□ 0.01
PCNX2-204ENST00000429988 CDC42BPBQ9Y5S2 1711 aa15.12■□□□□ 0.01
PCNX2-204ENST00000429988 GGT6Q6P531 493 aa15.1■□□□□ 0.01
PCNX2-204ENST00000429988 RNF17Q9BXT8 1623 aaKnown RBP15.1■□□□□ 0.01
PCNX2-204ENST00000429988 SPAG9O60271 1321 aaKnown RBP15.08■□□□□ 0
PCNX2-204ENST00000429988 SETD1AO15047 1707 aaKnown RBP15.08■□□□□ 0
PCNX2-204ENST00000429988 PREX2Q70Z35 1606 aa15.07■□□□□ 0
PCNX2-204ENST00000429988 NPHP4O75161 1426 aaPredicted RBP15.07■□□□□ 0
PCNX2-204ENST00000429988 LRRC7Q96NW7 1537 aa15.07■□□□□ 0
PCNX2-204ENST00000429988 THEMISQ8N1K5 641 aaPredicted RBP15.06■□□□□ 0
PCNX2-204ENST00000429988 FMN1Q68DA7 1419 aa15.06■□□□□ 0
PCNX2-204ENST00000429988 SAMD9LQ8IVG5 1584 aa15.06■□□□□ 0
PCNX2-204ENST00000429988 SYNMO15061 1565 aa15.04■□□□□ -0
PCNX2-204ENST00000429988 A2MP01023 1474 aa15.04■□□□□ -0
PCNX2-204ENST00000429988 TNRQ92752 1358 aa15.04■□□□□ -0
PCNX2-204ENST00000429988 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.04■□□□□ -0
PCNX2-204ENST00000429988 MED14O60244 1454 aa15.03■□□□□ -0
PCNX2-204ENST00000429988 UPF1Q92900 1129 aaKnown RBP eCLIP15.03■□□□□ -0
PCNX2-204ENST00000429988 PLXNC1O60486 1568 aa15.02■□□□□ -0
PCNX2-204ENST00000429988 DEPDC5O75140 1603 aa15.02□□□□□ -0.01
PCNX2-204ENST00000429988 ZNF777Q9ULD5 760 aaPredicted RBP15.01□□□□□ -0.01
PCNX2-204ENST00000429988 ATP7AQ04656 1500 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms