RNA–Protein interactions for RNA: ENST00000429703.6

R3HDM1-206, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-206ENST00000429703 CENPJQ9HC77 1338 aaPredicted RBP5.98□□□□□ -1.45
R3HDM1-206ENST00000429703 FANCD2Q9BXW9 1451 aa5.98□□□□□ -1.45
R3HDM1-206ENST00000429703 URB2Q14146 1524 aaKnown RBP5.98□□□□□ -1.45
R3HDM1-206ENST00000429703 BRD2P25440 801 aaKnown RBP5.97□□□□□ -1.45
R3HDM1-206ENST00000429703 WRNQ14191 1432 aaPredicted RBP eCLIP5.97□□□□□ -1.45
R3HDM1-206ENST00000429703 USP35Q9P2H5 1018 aa5.97□□□□□ -1.45
R3HDM1-206ENST00000429703 RGL2O15211 777 aa5.96□□□□□ -1.45
R3HDM1-206ENST00000429703 IFT140Q96RY7 1462 aa5.96□□□□□ -1.46
R3HDM1-206ENST00000429703 POLA2Q14181 598 aa5.96□□□□□ -1.46
R3HDM1-206ENST00000429703 SPRYD3Q8NCJ5 442 aa5.96□□□□□ -1.46
R3HDM1-206ENST00000429703 NEFMP07197 916 aa5.95□□□□□ -1.46
R3HDM1-206ENST00000429703 GSE1Q14687 1217 aa5.95□□□□□ -1.46
R3HDM1-206ENST00000429703 ZFP91Q96JP5 570 aaPredicted RBP5.95□□□□□ -1.46
R3HDM1-206ENST00000429703 TRHP20396 242 aaPredicted RBP5.95□□□□□ -1.46
R3HDM1-206ENST00000429703 FRAT1Q92837 279 aaPredicted RBP5.94□□□□□ -1.46
R3HDM1-206ENST00000429703 NAP1L5Q96NT1 182 aaPredicted RBP5.94□□□□□ -1.46
R3HDM1-206ENST00000429703 TULP1O00294 542 aaPredicted RBP5.93□□□□□ -1.46
R3HDM1-206ENST00000429703 ZNF830Q96NB3 372 aaPredicted RBP5.93□□□□□ -1.46
R3HDM1-206ENST00000429703 EIF4G3O43432 1585 aaKnown RBP5.93□□□□□ -1.46
R3HDM1-206ENST00000429703 SPINK5Q9NQ38 1064 aaPredicted RBP5.93□□□□□ -1.46
R3HDM1-206ENST00000429703 IRX6P78412 446 aaPredicted RBP5.92□□□□□ -1.46
R3HDM1-206ENST00000429703 TMEM51Q9NW97 253 aa5.92□□□□□ -1.46
R3HDM1-206ENST00000429703 CCDC88BA6NC98 1476 aa5.92□□□□□ -1.46
R3HDM1-206ENST00000429703 BIVM-ERCC5R4GMW8 1640 aa5.92□□□□□ -1.46
R3HDM1-206ENST00000429703 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.92□□□□□ -1.46
R3HDM1-206ENST00000429703 TOPBP1Q92547 1522 aa5.92□□□□□ -1.46
R3HDM1-206ENST00000429703 SECISBP2LQ93073 1101 aaKnown RBP5.92□□□□□ -1.46
R3HDM1-206ENST00000429703 CLASP1Q7Z460 1538 aa5.91□□□□□ -1.46
R3HDM1-206ENST00000429703 TEX2Q8IWB9 1127 aa5.9□□□□□ -1.46
R3HDM1-206ENST00000429703 LAS1LQ9Y4W2 734 aaKnown RBP5.9□□□□□ -1.46
R3HDM1-206ENST00000429703 ABCA5Q8WWZ7 1642 aa5.9□□□□□ -1.46
R3HDM1-206ENST00000429703 PBRM1Q86U86 1689 aa5.9□□□□□ -1.47
R3HDM1-206ENST00000429703 ZBTB47Q9UFB7 747 aaPredicted RBP5.9□□□□□ -1.47
R3HDM1-206ENST00000429703 CHD1O14646 1710 aa5.89□□□□□ -1.47
R3HDM1-206ENST00000429703 HSP90AA1P07900 732 aaKnown RBP5.89□□□□□ -1.47
R3HDM1-206ENST00000429703 TRIM52Q96A61 297 aa5.89□□□□□ -1.47
R3HDM1-206ENST00000429703 KCNG1Q9UIX4 513 aa5.89□□□□□ -1.47
R3HDM1-206ENST00000429703 CHGAP10645 457 aaKnown RBP5.89□□□□□ -1.47
R3HDM1-206ENST00000429703 PPP4R2Q9NY27 417 aa5.88□□□□□ -1.47
R3HDM1-206ENST00000429703 RIMBP3CA6NJZ7 1639 aa5.88□□□□□ -1.47
R3HDM1-206ENST00000429703 RIMBP3BA6NNM3 1639 aa5.88□□□□□ -1.47
R3HDM1-206ENST00000429703 RIMBP3Q9UFD9 1639 aa5.88□□□□□ -1.47
R3HDM1-206ENST00000429703 FTSJ3Q8IY81 847 aaKnown RBP5.87□□□□□ -1.47
R3HDM1-206ENST00000429703 PLCD3Q8N3E9 789 aa5.87□□□□□ -1.47
R3HDM1-206ENST00000429703 CANXP27824 592 aaKnown RBP5.87□□□□□ -1.47
R3HDM1-206ENST00000429703 SHROOM2Q13796 1616 aa5.87□□□□□ -1.47
R3HDM1-206ENST00000429703 ZNF326Q5BKZ1 582 aaKnown RBP5.87□□□□□ -1.47
R3HDM1-206ENST00000429703 B4GALNT3Q6L9W6 998 aa5.87□□□□□ -1.47
R3HDM1-206ENST00000429703 PDCL3Q9H2J4 239 aa5.87□□□□□ -1.47
R3HDM1-206ENST00000429703 CLCN1P35523 988 aa5.86□□□□□ -1.47
R3HDM1-206ENST00000429703 DDRGK1Q96HY6 314 aa5.86□□□□□ -1.47
R3HDM1-206ENST00000429703 HOMEZQ8IX15 550 aa5.86□□□□□ -1.47
R3HDM1-206ENST00000429703 STAG3Q9UJ98 1225 aa5.86□□□□□ -1.47
R3HDM1-206ENST00000429703 EEA1Q15075 1411 aa5.85□□□□□ -1.47
R3HDM1-206ENST00000429703 CAPN15O75808 1086 aa5.85□□□□□ -1.47
R3HDM1-206ENST00000429703 ANP32AP39687 249 aaKnown RBP5.85□□□□□ -1.47
R3HDM1-206ENST00000429703 DHX57Q6P158 1386 aaKnown RBP5.85□□□□□ -1.47
R3HDM1-206ENST00000429703 MAGI1Q96QZ7 1491 aaPredicted RBP5.85□□□□□ -1.47
R3HDM1-206ENST00000429703 NFKBIBQ15653 356 aa5.85□□□□□ -1.47
R3HDM1-206ENST00000429703 VGLL3A8MV65 326 aa5.84□□□□□ -1.48
R3HDM1-206ENST00000429703 PPM1GO15355 546 aaPredicted RBP5.84□□□□□ -1.48
R3HDM1-206ENST00000429703 CIZ1Q9ULV3 898 aaPredicted RBP5.84□□□□□ -1.48
R3HDM1-206ENST00000429703 PPP1R15AO75807 674 aaPredicted RBP5.83□□□□□ -1.48
R3HDM1-206ENST00000429703 ZHX1Q9UKY1 873 aaPredicted RBP5.83□□□□□ -1.48
R3HDM1-206ENST00000429703 ZBTB12Q9Y330 459 aaPredicted RBP5.83□□□□□ -1.48
R3HDM1-206ENST00000429703 TOP2BQ02880 1626 aa5.83□□□□□ -1.48
R3HDM1-206ENST00000429703 POLA1P09884 1462 aaPredicted RBP5.83□□□□□ -1.48
R3HDM1-206ENST00000429703 ABCA10Q8WWZ4 1543 aa5.83□□□□□ -1.48
R3HDM1-206ENST00000429703 RGS22Q8NE09 1264 aa5.82□□□□□ -1.48
R3HDM1-206ENST00000429703 SLC52A1Q9NWF4 448 aa5.82□□□□□ -1.48
R3HDM1-206ENST00000429703 CUX1P39880 1505 aa5.82□□□□□ -1.48
R3HDM1-206ENST00000429703 CCER2I3L3R5 266 aa5.82□□□□□ -1.48
R3HDM1-206ENST00000429703 NPM2Q86SE8 214 aaKnown RBP5.82□□□□□ -1.48
R3HDM1-206ENST00000429703 SMAP1Q8IYB5 467 aaPredicted RBP5.82□□□□□ -1.48
R3HDM1-206ENST00000429703 ZNF692Q9BU19 519 aaPredicted RBP5.81□□□□□ -1.48
R3HDM1-206ENST00000429703 SYNJ1O43426 1573 aa5.81□□□□□ -1.48
R3HDM1-206ENST00000429703 ABCB7O75027 752 aa5.81□□□□□ -1.48
R3HDM1-206ENST00000429703 ERBB4Q15303 1308 aa5.81□□□□□ -1.48
R3HDM1-206ENST00000429703 ADAMTS12P58397 1594 aa5.81□□□□□ -1.48
R3HDM1-206ENST00000429703 CNGB1Q14028 1251 aaPredicted RBP5.8□□□□□ -1.48
R3HDM1-206ENST00000429703 UTP14CQ5TAP6 766 aaKnown RBP5.8□□□□□ -1.48
R3HDM1-206ENST00000429703 BCCIPQ9P287 314 aaKnown RBP eCLIP5.8□□□□□ -1.48
R3HDM1-206ENST00000429703 ARHGEF11O15085 1522 aa5.8□□□□□ -1.48
R3HDM1-206ENST00000429703 RIPK4P57078 832 aa5.8□□□□□ -1.48
R3HDM1-206ENST00000429703 DMTNQ08495 405 aa5.8□□□□□ -1.48
R3HDM1-206ENST00000429703 HS6ST3Q8IZP7 471 aa5.8□□□□□ -1.48
R3HDM1-206ENST00000429703 PNNQ9H307 717 aaKnown RBP5.8□□□□□ -1.48
R3HDM1-206ENST00000429703 ERICH3Q5RHP9 1530 aa5.8□□□□□ -1.48
R3HDM1-206ENST00000429703 CNPY4Q8N129 248 aa5.79□□□□□ -1.48
R3HDM1-206ENST00000429703 ZNF608Q9ULD9 1512 aaPredicted RBP5.79□□□□□ -1.48
R3HDM1-206ENST00000429703 ZSCAN20P17040 1043 aaPredicted RBP5.79□□□□□ -1.48
R3HDM1-206ENST00000429703 VGFO15240 615 aaPredicted RBP5.78□□□□□ -1.48
R3HDM1-206ENST00000429703 PPP4R3BQ5MIZ7 849 aa5.78□□□□□ -1.48
R3HDM1-206ENST00000429703 SIN3AQ96ST3 1273 aa5.78□□□□□ -1.48
R3HDM1-206ENST00000429703 MMP14P50281 582 aa5.78□□□□□ -1.48
R3HDM1-206ENST00000429703 ILDR1Q86SU0 546 aaPredicted RBP5.78□□□□□ -1.48
R3HDM1-206ENST00000429703 CEP162Q5TB80 1403 aa5.78□□□□□ -1.48
R3HDM1-206ENST00000429703 MAPKBP1O60336 1514 aa5.77□□□□□ -1.49
R3HDM1-206ENST00000429703 SYNJ2O15056 1496 aa5.77□□□□□ -1.49
R3HDM1-206ENST00000429703 GRIN2BQ13224 1484 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms