RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 DAPK1P53355 1430 aa19.6■□□□□ 0.73
THBS3-202ENST00000428962 PLB1Q6P1J6 1458 aa19.59■□□□□ 0.73
THBS3-202ENST00000428962 JPH4Q96JJ6 628 aa19.59■□□□□ 0.73
THBS3-202ENST00000428962 RRP7BPQ9NSQ0 103 aa19.59■□□□□ 0.73
THBS3-202ENST00000428962 CHIC2Q9UKJ5 165 aa19.57■□□□□ 0.72
THBS3-202ENST00000428962 GTF3C3Q9Y5Q9 886 aa19.56■□□□□ 0.72
THBS3-202ENST00000428962 ABCA8O94911 1581 aa19.55■□□□□ 0.72
THBS3-202ENST00000428962 ABCC5O15440 1437 aa19.54■□□□□ 0.72
THBS3-202ENST00000428962 PRG4Q92954 1404 aaPredicted RBP19.54■□□□□ 0.72
THBS3-202ENST00000428962 KDM6BO15054 1643 aa19.54■□□□□ 0.72
THBS3-202ENST00000428962 CAMSAP2Q08AD1 1489 aa19.52■□□□□ 0.72
THBS3-202ENST00000428962 ADGBQ8N7X0 1667 aa19.51■□□□□ 0.71
THBS3-202ENST00000428962 TRIM52Q96A61 297 aa19.51■□□□□ 0.71
THBS3-202ENST00000428962 KIF14Q15058 1648 aa19.5■□□□□ 0.71
THBS3-202ENST00000428962 GPATCH8Q9UKJ3 1502 aaKnown RBP19.49■□□□□ 0.71
THBS3-202ENST00000428962 DENND4BO75064 1496 aaPredicted RBP19.48■□□□□ 0.71
THBS3-202ENST00000428962 CROCC2H7BZ55 1655 aa19.47■□□□□ 0.71
THBS3-202ENST00000428962 CFDP1Q9UEE9 299 aaPredicted RBP19.47■□□□□ 0.71
THBS3-202ENST00000428962 KDM5BQ9UGL1 1544 aa19.46■□□□□ 0.71
THBS3-202ENST00000428962 MPHOSPH9Q99550 1183 aa19.45■□□□□ 0.7
THBS3-202ENST00000428962 SHROOM2Q13796 1616 aa19.45■□□□□ 0.7
THBS3-202ENST00000428962 ZNF644Q9H582 1327 aaPredicted RBP19.44■□□□□ 0.7
THBS3-202ENST00000428962 ADGRL2O95490 1459 aa19.44■□□□□ 0.7
THBS3-202ENST00000428962 PLEKHD1A6NEE1 506 aa19.43■□□□□ 0.7
THBS3-202ENST00000428962 ATP10BO94823 1461 aa19.43■□□□□ 0.7
THBS3-202ENST00000428962 ERCC6L2Q5T890 1561 aa19.43■□□□□ 0.7
THBS3-202ENST00000428962 CDC42BPAQ5VT25 1732 aa19.41■□□□□ 0.7
THBS3-202ENST00000428962 ABCC10Q5T3U5 1492 aa19.4■□□□□ 0.7
THBS3-202ENST00000428962 SHANK2Q9UPX8 1470 aa19.39■□□□□ 0.69
THBS3-202ENST00000428962 PTPRGP23470 1445 aa19.39■□□□□ 0.69
THBS3-202ENST00000428962 DDX10Q13206 875 aaKnown RBP19.39■□□□□ 0.69
THBS3-202ENST00000428962 NCOA1Q15788 1441 aa19.38■□□□□ 0.69
THBS3-202ENST00000428962 ANKRD30AQ9BXX3 1397 aa19.37■□□□□ 0.69
THBS3-202ENST00000428962 RPRD2Q5VT52 1461 aaKnown RBP19.36■□□□□ 0.69
THBS3-202ENST00000428962 ANKRD30BQ9BXX2 1392 aa19.35■□□□□ 0.69
THBS3-202ENST00000428962 TRHP20396 242 aaPredicted RBP19.35■□□□□ 0.69
THBS3-202ENST00000428962 ZNF777Q9ULD5 760 aaPredicted RBP19.34■□□□□ 0.69
THBS3-202ENST00000428962 SLC4A1APQ9BWU0 796 aaKnown RBP19.32■□□□□ 0.68
THBS3-202ENST00000428962 PZPP20742 1482 aa19.31■□□□□ 0.68
THBS3-202ENST00000428962 ARHGEF5Q12774 1597 aa19.31■□□□□ 0.68
THBS3-202ENST00000428962 HIRIP3Q9BW71 556 aaPredicted RBP19.3■□□□□ 0.68
THBS3-202ENST00000428962 C9orf84Q5VXU9 1444 aa19.29■□□□□ 0.68
THBS3-202ENST00000428962 PREX2Q70Z35 1606 aa19.29■□□□□ 0.68
THBS3-202ENST00000428962 ANP32CO43423 234 aa19.29■□□□□ 0.68
THBS3-202ENST00000428962 TEX14Q8IWB6 1497 aa19.29■□□□□ 0.68
THBS3-202ENST00000428962 CCER2I3L3R5 266 aa19.28■□□□□ 0.68
THBS3-202ENST00000428962 ANKRD50Q9ULJ7 1429 aa19.27■□□□□ 0.68
THBS3-202ENST00000428962 FOXD1Q16676 465 aa19.26■□□□□ 0.67
THBS3-202ENST00000428962 L3MBTL2Q969R5 705 aa19.26■□□□□ 0.67
THBS3-202ENST00000428962 KIAA1107Q9UPP5 1409 aa19.26■□□□□ 0.67
THBS3-202ENST00000428962 EIF4G2P78344 907 aaKnown RBP eCLIP19.24■□□□□ 0.67
THBS3-202ENST00000428962 ABCC2Q92887 1545 aa19.24■□□□□ 0.67
THBS3-202ENST00000428962 KDM5DQ9BY66 1539 aa19.23■□□□□ 0.67
THBS3-202ENST00000428962 TSPY4P0CV99 314 aa19.23■□□□□ 0.67
THBS3-202ENST00000428962 TSPY10P0CW01 314 aa19.23■□□□□ 0.67
THBS3-202ENST00000428962 CCDC141Q6ZP82 1450 aa19.22■□□□□ 0.67
THBS3-202ENST00000428962 CDC42BPBQ9Y5S2 1711 aa19.22■□□□□ 0.67
THBS3-202ENST00000428962 HSPA5P11021 654 aaKnown RBP19.22■□□□□ 0.67
THBS3-202ENST00000428962 SAMD9LQ8IVG5 1584 aa19.22■□□□□ 0.67
THBS3-202ENST00000428962 RSPH4AQ5TD94 716 aa19.2■□□□□ 0.66
THBS3-202ENST00000428962 MBD5Q9P267 1494 aa19.2■□□□□ 0.66
THBS3-202ENST00000428962 NPM1P06748 294 aaKnown RBP eCLIP19.18■□□□□ 0.66
THBS3-202ENST00000428962 KIF15Q9NS87 1388 aa19.18■□□□□ 0.66
THBS3-202ENST00000428962 TTC37Q6PGP7 1564 aa19.17■□□□□ 0.66
THBS3-202ENST00000428962 KCNH8Q96L42 1107 aa19.16■□□□□ 0.66
THBS3-202ENST00000428962 MAST1Q9Y2H9 1570 aa19.16■□□□□ 0.66
THBS3-202ENST00000428962 MYO5CQ9NQX4 1742 aa19.16■□□□□ 0.66
THBS3-202ENST00000428962 PLEKHH2Q8IVE3 1493 aa19.16■□□□□ 0.66
THBS3-202ENST00000428962 ARHGAP5Q13017 1502 aa19.15■□□□□ 0.66
THBS3-202ENST00000428962 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.15■□□□□ 0.66
THBS3-202ENST00000428962 PKD2Q13563 968 aa19.14■□□□□ 0.65
THBS3-202ENST00000428962 UHRF1BP1LA0JNW5 1464 aa19.14■□□□□ 0.65
THBS3-202ENST00000428962 NUP155O75694 1391 aa19.14■□□□□ 0.65
THBS3-202ENST00000428962 WASHC2AQ641Q2 1341 aa19.13■□□□□ 0.65
THBS3-202ENST00000428962 HNRNPMP52272 730 aaKnown RBP eCLIP19.13■□□□□ 0.65
THBS3-202ENST00000428962 MYT1Q01538 1121 aa19.13■□□□□ 0.65
THBS3-202ENST00000428962 POLR1AO95602 1720 aaPredicted RBP19.13■□□□□ 0.65
THBS3-202ENST00000428962 SYCP2Q9BX26 1530 aa19.12■□□□□ 0.65
THBS3-202ENST00000428962 CNTLNQ9NXG0 1405 aa19.12■□□□□ 0.65
THBS3-202ENST00000428962 NBPF8Q3BBV2 869 aa19.11■□□□□ 0.65
THBS3-202ENST00000428962 ARHGEF12Q9NZN5 1544 aa19.1■□□□□ 0.65
THBS3-202ENST00000428962 PLXNC1O60486 1568 aa19.09■□□□□ 0.65
THBS3-202ENST00000428962 ZCCHC11Q5TAX3 1644 aaKnown RBP19.09■□□□□ 0.65
THBS3-202ENST00000428962 CCDC7Q96M83 1385 aa19.08■□□□□ 0.65
THBS3-202ENST00000428962 SPATA31E1Q6ZUB1 1445 aa19.08■□□□□ 0.65
THBS3-202ENST00000428962 UNC13BO14795 1591 aa19.06■□□□□ 0.64
THBS3-202ENST00000428962 FAM135AQ9P2D6 1515 aa19.05■□□□□ 0.64
THBS3-202ENST00000428962 UHRF1BP1Q6BDS2 1440 aa19.05■□□□□ 0.64
THBS3-202ENST00000428962 PLCH2O75038 1416 aa19.02■□□□□ 0.64
THBS3-202ENST00000428962 RALGAPBQ86X10 1494 aa19.02■□□□□ 0.63
THBS3-202ENST00000428962 DUOX2Q9NRD8 1548 aa19.01■□□□□ 0.63
THBS3-202ENST00000428962 SUPT16HQ9Y5B9 1047 aaKnown RBP19■□□□□ 0.63
THBS3-202ENST00000428962 FAM69CQ0P6D2 419 aa19■□□□□ 0.63
THBS3-202ENST00000428962 ARAP3Q8WWN8 1544 aa18.99■□□□□ 0.63
THBS3-202ENST00000428962 KDM5CP41229 1560 aa18.99■□□□□ 0.63
THBS3-202ENST00000428962 ABCC1P33527 1531 aa18.98■□□□□ 0.63
THBS3-202ENST00000428962 USP47Q96K76 1375 aa18.98■□□□□ 0.63
THBS3-202ENST00000428962 ERBINQ96RT1 1412 aa18.98■□□□□ 0.63
THBS3-202ENST00000428962 IQGAP3Q86VI3 1631 aa18.98■□□□□ 0.63
THBS3-202ENST00000428962 KIF7Q2M1P5 1343 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms