RNA–Protein interactions for RNA: ENST00000428621.5

CLHC1-207, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

TSL 2

Gene CLHC1, Length 2,052 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-207ENST00000428621 CEP170Q5SW79 1584 aa11.46□□□□□ -0.58
CLHC1-207ENST00000428621 DAPK1P53355 1430 aa11.45□□□□□ -0.58
CLHC1-207ENST00000428621 ADCY10Q96PN6 1610 aa11.45□□□□□ -0.58
CLHC1-207ENST00000428621 ERCC6Q03468 1493 aa11.45□□□□□ -0.58
CLHC1-207ENST00000428621 DNAJC5Q9H3Z4 198 aa11.44□□□□□ -0.58
CLHC1-207ENST00000428621 NUP160Q12769 1436 aa11.44□□□□□ -0.58
CLHC1-207ENST00000428621 KDM6BO15054 1643 aa11.44□□□□□ -0.58
CLHC1-207ENST00000428621 ITSN2Q9NZM3 1697 aa11.44□□□□□ -0.58
CLHC1-207ENST00000428621 TROQ12816 1431 aaPredicted RBP11.44□□□□□ -0.58
CLHC1-207ENST00000428621 CDK11AQ9UQ88 783 aaPredicted RBP11.42□□□□□ -0.58
CLHC1-207ENST00000428621 ABCC5O15440 1437 aa11.42□□□□□ -0.58
CLHC1-207ENST00000428621 SLC4A1APQ9BWU0 796 aaKnown RBP11.42□□□□□ -0.58
CLHC1-207ENST00000428621 CCER2I3L3R5 266 aa11.41□□□□□ -0.58
CLHC1-207ENST00000428621 DDX10Q13206 875 aaKnown RBP11.41□□□□□ -0.58
CLHC1-207ENST00000428621 RRP7BPQ9NSQ0 103 aa11.4□□□□□ -0.58
CLHC1-207ENST00000428621 CARMIL2Q6F5E8 1435 aa11.4□□□□□ -0.58
CLHC1-207ENST00000428621 ADGRL2O95490 1459 aa11.39□□□□□ -0.59
CLHC1-207ENST00000428621 ADGBQ8N7X0 1667 aa11.38□□□□□ -0.59
CLHC1-207ENST00000428621 CAMSAP2Q08AD1 1489 aa11.38□□□□□ -0.59
CLHC1-207ENST00000428621 RPRD2Q5VT52 1461 aaKnown RBP11.38□□□□□ -0.59
CLHC1-207ENST00000428621 CROCC2H7BZ55 1655 aa11.38□□□□□ -0.59
CLHC1-207ENST00000428621 CHIC2Q9UKJ5 165 aa11.37□□□□□ -0.59
CLHC1-207ENST00000428621 PLB1Q6P1J6 1458 aa11.37□□□□□ -0.59
CLHC1-207ENST00000428621 MPHOSPH9Q99550 1183 aa11.37□□□□□ -0.59
CLHC1-207ENST00000428621 GPATCH8Q9UKJ3 1502 aaKnown RBP11.36□□□□□ -0.59
CLHC1-207ENST00000428621 TEX14Q8IWB6 1497 aa11.36□□□□□ -0.59
CLHC1-207ENST00000428621 ABCA8O94911 1581 aa11.36□□□□□ -0.59
CLHC1-207ENST00000428621 PRG4Q92954 1404 aaPredicted RBP11.36□□□□□ -0.59
CLHC1-207ENST00000428621 ANKRD30BQ9BXX2 1392 aa11.36□□□□□ -0.59
CLHC1-207ENST00000428621 ANP32CO43423 234 aa11.36□□□□□ -0.59
CLHC1-207ENST00000428621 CHMP7Q8WUX9 453 aaPredicted RBP11.36□□□□□ -0.59
CLHC1-207ENST00000428621 SUPT16HQ9Y5B9 1047 aaKnown RBP11.35□□□□□ -0.59
CLHC1-207ENST00000428621 KIF14Q15058 1648 aa11.35□□□□□ -0.59
CLHC1-207ENST00000428621 SHANK2Q9UPX8 1470 aa11.35□□□□□ -0.59
CLHC1-207ENST00000428621 TRIM52Q96A61 297 aa11.34□□□□□ -0.59
CLHC1-207ENST00000428621 DMRT2Q9Y5R5 561 aa11.34□□□□□ -0.59
CLHC1-207ENST00000428621 KCNH8Q96L42 1107 aa11.34□□□□□ -0.59
CLHC1-207ENST00000428621 NCOA1Q15788 1441 aa11.33□□□□□ -0.6
CLHC1-207ENST00000428621 ARID3CA6NKF2 412 aa11.33□□□□□ -0.6
CLHC1-207ENST00000428621 PZPP20742 1482 aa11.32□□□□□ -0.6
CLHC1-207ENST00000428621 ABCC10Q5T3U5 1492 aa11.31□□□□□ -0.6
CLHC1-207ENST00000428621 HIRIP3Q9BW71 556 aaPredicted RBP11.31□□□□□ -0.6
CLHC1-207ENST00000428621 ZNF644Q9H582 1327 aaPredicted RBP11.31□□□□□ -0.6
CLHC1-207ENST00000428621 JPH4Q96JJ6 628 aa11.3□□□□□ -0.6
CLHC1-207ENST00000428621 CFDP1Q9UEE9 299 aaPredicted RBP11.3□□□□□ -0.6
CLHC1-207ENST00000428621 EIF4G2P78344 907 aaKnown RBP eCLIP11.29□□□□□ -0.6
CLHC1-207ENST00000428621 MBD5Q9P267 1494 aa11.29□□□□□ -0.6
CLHC1-207ENST00000428621 CDC42BPAQ5VT25 1732 aa11.29□□□□□ -0.6
CLHC1-207ENST00000428621 ANKRD30AQ9BXX3 1397 aa11.29□□□□□ -0.6
CLHC1-207ENST00000428621 HSPA5P11021 654 aaKnown RBP11.28□□□□□ -0.6
CLHC1-207ENST00000428621 WASHC2AQ641Q2 1341 aa11.28□□□□□ -0.6
CLHC1-207ENST00000428621 L3MBTL2Q969R5 705 aa11.28□□□□□ -0.6
CLHC1-207ENST00000428621 KDM5DQ9BY66 1539 aa11.28□□□□□ -0.6
CLHC1-207ENST00000428621 CNTLNQ9NXG0 1405 aa11.28□□□□□ -0.6
CLHC1-207ENST00000428621 ATP10BO94823 1461 aa11.28□□□□□ -0.6
CLHC1-207ENST00000428621 KIAA1107Q9UPP5 1409 aa11.28□□□□□ -0.6
CLHC1-207ENST00000428621 RNF216Q9NWF9 866 aaPredicted RBP11.28□□□□□ -0.6
CLHC1-207ENST00000428621 POLR1AO95602 1720 aaPredicted RBP11.27□□□□□ -0.6
CLHC1-207ENST00000428621 ARHGEF5Q12774 1597 aa11.27□□□□□ -0.61
CLHC1-207ENST00000428621 SPATA31E1Q6ZUB1 1445 aa11.26□□□□□ -0.61
CLHC1-207ENST00000428621 ANKRD50Q9ULJ7 1429 aa11.25□□□□□ -0.61
CLHC1-207ENST00000428621 C9orf84Q5VXU9 1444 aa11.25□□□□□ -0.61
CLHC1-207ENST00000428621 CCDC7Q96M83 1385 aa11.24□□□□□ -0.61
CLHC1-207ENST00000428621 PLEKHD1A6NEE1 506 aa11.24□□□□□ -0.61
CLHC1-207ENST00000428621 FBLN2P98095 1184 aa11.24□□□□□ -0.61
CLHC1-207ENST00000428621 ARHGEF12Q9NZN5 1544 aa11.23□□□□□ -0.61
CLHC1-207ENST00000428621 SHROOM2Q13796 1616 aa11.22□□□□□ -0.61
CLHC1-207ENST00000428621 PREX2Q70Z35 1606 aa11.22□□□□□ -0.61
CLHC1-207ENST00000428621 PTPRGP23470 1445 aa11.22□□□□□ -0.61
CLHC1-207ENST00000428621 UHRF1BP1Q6BDS2 1440 aa11.2□□□□□ -0.62
CLHC1-207ENST00000428621 CCDC141Q6ZP82 1450 aa11.2□□□□□ -0.62
CLHC1-207ENST00000428621 NBPF8Q3BBV2 869 aa11.2□□□□□ -0.62
CLHC1-207ENST00000428621 SAMD9LQ8IVG5 1584 aa11.19□□□□□ -0.62
CLHC1-207ENST00000428621 MAST1Q9Y2H9 1570 aa11.19□□□□□ -0.62
CLHC1-207ENST00000428621 RALGAPBQ86X10 1494 aa11.19□□□□□ -0.62
CLHC1-207ENST00000428621 ZNF777Q9ULD5 760 aaPredicted RBP11.18□□□□□ -0.62
CLHC1-207ENST00000428621 CHD1O14646 1710 aa11.18□□□□□ -0.62
CLHC1-207ENST00000428621 KIF15Q9NS87 1388 aa11.17□□□□□ -0.62
CLHC1-207ENST00000428621 NEFLP07196 543 aa11.17□□□□□ -0.62
CLHC1-207ENST00000428621 HOXD11P31277 338 aaPredicted RBP11.17□□□□□ -0.62
CLHC1-207ENST00000428621 KDM5CP41229 1560 aa11.17□□□□□ -0.62
CLHC1-207ENST00000428621 CDC42BPBQ9Y5S2 1711 aa11.16□□□□□ -0.62
CLHC1-207ENST00000428621 ARID4BQ4LE39 1312 aaPredicted RBP11.16□□□□□ -0.62
CLHC1-207ENST00000428621 PKD2Q13563 968 aa11.16□□□□□ -0.62
CLHC1-207ENST00000428621 KIF7Q2M1P5 1343 aa11.16□□□□□ -0.62
CLHC1-207ENST00000428621 ABCC2Q92887 1545 aa11.15□□□□□ -0.62
CLHC1-207ENST00000428621 RSPH4AQ5TD94 716 aa11.15□□□□□ -0.62
CLHC1-207ENST00000428621 PRKRIP1Q9H875 184 aaPredicted RBP11.15□□□□□ -0.62
CLHC1-207ENST00000428621 NUP155O75694 1391 aa11.15□□□□□ -0.62
CLHC1-207ENST00000428621 PLXNC1O60486 1568 aa11.15□□□□□ -0.62
CLHC1-207ENST00000428621 C11orf95C9JLR9 678 aaPredicted RBP11.15□□□□□ -0.63
CLHC1-207ENST00000428621 TSPY4P0CV99 314 aa11.15□□□□□ -0.63
CLHC1-207ENST00000428621 TSPY10P0CW01 314 aa11.15□□□□□ -0.63
CLHC1-207ENST00000428621 USP47Q96K76 1375 aa11.14□□□□□ -0.63
CLHC1-207ENST00000428621 UNC13BO14795 1591 aa11.14□□□□□ -0.63
CLHC1-207ENST00000428621 FKBP8Q14318 412 aa11.14□□□□□ -0.63
CLHC1-207ENST00000428621 PLEKHH2Q8IVE3 1493 aa11.14□□□□□ -0.63
CLHC1-207ENST00000428621 TTC37Q6PGP7 1564 aa11.14□□□□□ -0.63
CLHC1-207ENST00000428621 FAM135AQ9P2D6 1515 aa11.13□□□□□ -0.63
CLHC1-207ENST00000428621 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms