RNA–Protein interactions for RNA: ENST00000427276.1

LINC01108-201, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 2 BASIC

Gene LINC01108, Length 3,152 nt, Biotype lincRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-201ENST00000427276 SLC4A1APQ9BWU0 796 aaKnown RBP10.06□□□□□ -0.8
LINC01108-201ENST00000427276 NBPF8Q3BBV2 869 aa10.06□□□□□ -0.8
LINC01108-201ENST00000427276 NUDCQ9Y266 331 aa10.06□□□□□ -0.8
LINC01108-201ENST00000427276 CCDC7Q96M83 1385 aa10.05□□□□□ -0.8
LINC01108-201ENST00000427276 CFTRP13569 1480 aa10.05□□□□□ -0.8
LINC01108-201ENST00000427276 KIF7Q2M1P5 1343 aa10.05□□□□□ -0.8
LINC01108-201ENST00000427276 FMN1Q68DA7 1419 aa10.05□□□□□ -0.8
LINC01108-201ENST00000427276 FGD5Q6ZNL6 1462 aa10.04□□□□□ -0.8
LINC01108-201ENST00000427276 TULP1O00294 542 aaPredicted RBP10.04□□□□□ -0.8
LINC01108-201ENST00000427276 FANCD2Q9BXW9 1451 aa10.03□□□□□ -0.8
LINC01108-201ENST00000427276 KDM2AQ9Y2K7 1162 aa10.03□□□□□ -0.8
LINC01108-201ENST00000427276 SKAP1Q86WV1 359 aa10.03□□□□□ -0.8
LINC01108-201ENST00000427276 NAIPQ13075 1403 aa10.02□□□□□ -0.8
LINC01108-201ENST00000427276 EXOC6Q8TAG9 804 aa10.02□□□□□ -0.8
LINC01108-201ENST00000427276 AMER1Q5JTC6 1135 aaPredicted RBP10.02□□□□□ -0.81
LINC01108-201ENST00000427276 ADRA2BP18089 450 aa10.02□□□□□ -0.81
LINC01108-201ENST00000427276 ZNF777Q9ULD5 760 aaPredicted RBP10.02□□□□□ -0.81
LINC01108-201ENST00000427276 HFM1A2PYH4 1435 aa10.01□□□□□ -0.81
LINC01108-201ENST00000427276 SLC4A3P48751 1232 aa10.01□□□□□ -0.81
LINC01108-201ENST00000427276 MAP3K1Q13233 1512 aa10.01□□□□□ -0.81
LINC01108-201ENST00000427276 RAD54L2Q9Y4B4 1467 aa10□□□□□ -0.81
LINC01108-201ENST00000427276 PLIN1O60240 522 aa9.99□□□□□ -0.81
LINC01108-201ENST00000427276 CFAP43Q8NDM7 1665 aa9.98□□□□□ -0.81
LINC01108-201ENST00000427276 CASKIN1Q8WXD9 1431 aa9.98□□□□□ -0.81
LINC01108-201ENST00000427276 PDE4AP27815 886 aa9.98□□□□□ -0.81
LINC01108-201ENST00000427276 NCOA2Q15596 1464 aa9.97□□□□□ -0.81
LINC01108-201ENST00000427276 PTPN23Q9H3S7 1636 aa9.97□□□□□ -0.81
LINC01108-201ENST00000427276 MYOM3Q5VTT5 1437 aa9.96□□□□□ -0.81
LINC01108-201ENST00000427276 FYCO1Q9BQS8 1478 aa9.96□□□□□ -0.82
LINC01108-201ENST00000427276 TDRD9Q8NDG6 1382 aaKnown RBP9.96□□□□□ -0.82
LINC01108-201ENST00000427276 RCAN3Q9UKA8 241 aa9.96□□□□□ -0.82
LINC01108-201ENST00000427276 URB2Q14146 1524 aaKnown RBP9.95□□□□□ -0.82
LINC01108-201ENST00000427276 BRPF3Q9ULD4 1205 aa9.95□□□□□ -0.82
LINC01108-201ENST00000427276 KDM5BQ9UGL1 1544 aa9.95□□□□□ -0.82
LINC01108-201ENST00000427276 CARD11Q9BXL7 1154 aa9.94□□□□□ -0.82
LINC01108-201ENST00000427276 ZNF644Q9H582 1327 aaPredicted RBP9.94□□□□□ -0.82
LINC01108-201ENST00000427276 RRP1P56182 461 aaKnown RBP9.94□□□□□ -0.82
LINC01108-201ENST00000427276 NCOA1Q15788 1441 aa9.94□□□□□ -0.82
LINC01108-201ENST00000427276 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.93□□□□□ -0.82
LINC01108-201ENST00000427276 SMG6Q86US8 1419 aaKnown RBP9.93□□□□□ -0.82
LINC01108-201ENST00000427276 OSCARQ8IYS5 282 aa9.93□□□□□ -0.82
LINC01108-201ENST00000427276 CDCA7LQ96GN5 454 aa9.93□□□□□ -0.82
LINC01108-201ENST00000427276 TCERG1O14776 1098 aaKnown RBP9.92□□□□□ -0.82
LINC01108-201ENST00000427276 PPM1GO15355 546 aaPredicted RBP9.92□□□□□ -0.82
LINC01108-201ENST00000427276 PNISRQ8TF01 805 aaKnown RBP9.92□□□□□ -0.82
LINC01108-201ENST00000427276 CC2D1BQ5T0F9 858 aaKnown RBP9.91□□□□□ -0.82
LINC01108-201ENST00000427276 USP47Q96K76 1375 aa9.91□□□□□ -0.82
LINC01108-201ENST00000427276 RGS3P49796 1198 aa9.9□□□□□ -0.82
LINC01108-201ENST00000427276 PRDM2Q13029 1718 aa9.9□□□□□ -0.82
LINC01108-201ENST00000427276 PKD2Q13563 968 aa9.9□□□□□ -0.82
LINC01108-201ENST00000427276 ST20-MTHFSA0A0A6YYL1 179 aa9.89□□□□□ -0.83
LINC01108-201ENST00000427276 DENND4BO75064 1496 aaPredicted RBP9.89□□□□□ -0.83
LINC01108-201ENST00000427276 BACH2Q9BYV9 841 aa9.89□□□□□ -0.83
LINC01108-201ENST00000427276 KDM6BO15054 1643 aa9.89□□□□□ -0.83
LINC01108-201ENST00000427276 RGL3Q3MIN7 710 aa9.89□□□□□ -0.83
LINC01108-201ENST00000427276 CRBNQ96SW2 442 aa9.88□□□□□ -0.83
LINC01108-201ENST00000427276 SNAPC4Q5SXM2 1469 aa9.88□□□□□ -0.83
LINC01108-201ENST00000427276 DCAF11Q8TEB1 546 aa9.88□□□□□ -0.83
LINC01108-201ENST00000427276 PODXL2Q9NZ53 605 aa9.87□□□□□ -0.83
LINC01108-201ENST00000427276 POLA1P09884 1462 aaPredicted RBP9.87□□□□□ -0.83
LINC01108-201ENST00000427276 GSE1Q14687 1217 aa9.86□□□□□ -0.83
LINC01108-201ENST00000427276 NFKBIBQ15653 356 aa9.86□□□□□ -0.83
LINC01108-201ENST00000427276 DDRGK1Q96HY6 314 aa9.86□□□□□ -0.83
LINC01108-201ENST00000427276 LRRIQ1Q96JM4 1722 aa9.86□□□□□ -0.83
LINC01108-201ENST00000427276 IFT140Q96RY7 1462 aa9.86□□□□□ -0.83
LINC01108-201ENST00000427276 FRAT1Q92837 279 aaPredicted RBP9.85□□□□□ -0.83
LINC01108-201ENST00000427276 ANKRD30BQ9BXX2 1392 aa9.85□□□□□ -0.83
LINC01108-201ENST00000427276 CFDP1Q9UEE9 299 aaPredicted RBP9.85□□□□□ -0.83
LINC01108-201ENST00000427276 EFCAB5A4FU69 1503 aa9.84□□□□□ -0.83
LINC01108-201ENST00000427276 MAGI3Q5TCQ9 1506 aa9.84□□□□□ -0.83
LINC01108-201ENST00000427276 USP35Q9P2H5 1018 aa9.84□□□□□ -0.83
LINC01108-201ENST00000427276 DHX29Q7Z478 1369 aaKnown RBP9.84□□□□□ -0.83
LINC01108-201ENST00000427276 ZNF608Q9ULD9 1512 aaPredicted RBP9.84□□□□□ -0.83
LINC01108-201ENST00000427276 MYBBP1AQ9BQG0 1328 aaKnown RBP9.83□□□□□ -0.84
LINC01108-201ENST00000427276 TOPBP1Q92547 1522 aa9.83□□□□□ -0.84
LINC01108-201ENST00000427276 C20orf194Q5TEA3 1177 aa9.83□□□□□ -0.84
LINC01108-201ENST00000427276 RNF123Q5XPI4 1314 aa9.83□□□□□ -0.84
LINC01108-201ENST00000427276 SUPT6HQ7KZ85 1726 aaKnown RBP9.83□□□□□ -0.84
LINC01108-201ENST00000427276 KIF15Q9NS87 1388 aa9.82□□□□□ -0.84
LINC01108-201ENST00000427276 ZBTB22O15209 634 aa9.81□□□□□ -0.84
LINC01108-201ENST00000427276 FRAT2O75474 233 aaPredicted RBP9.81□□□□□ -0.84
LINC01108-201ENST00000427276 ABCA10Q8WWZ4 1543 aa9.81□□□□□ -0.84
LINC01108-201ENST00000427276 TPRNQ4KMQ1 711 aa9.81□□□□□ -0.84
LINC01108-201ENST00000427276 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.81□□□□□ -0.84
LINC01108-201ENST00000427276 CDK13Q14004 1512 aaKnown RBP9.81□□□□□ -0.84
LINC01108-201ENST00000427276 RALBP1Q15311 655 aa9.81□□□□□ -0.84
LINC01108-201ENST00000427276 GRIN2BQ13224 1484 aa9.81□□□□□ -0.84
LINC01108-201ENST00000427276 RPRD2Q5VT52 1461 aaKnown RBP9.81□□□□□ -0.84
LINC01108-201ENST00000427276 CTTNBP2Q8WZ74 1663 aa9.81□□□□□ -0.84
LINC01108-201ENST00000427276 MS4A1P11836 297 aa9.8□□□□□ -0.84
LINC01108-201ENST00000427276 NLRP13Q86W25 1043 aa9.8□□□□□ -0.84
LINC01108-201ENST00000427276 RIMBP3CA6NJZ7 1639 aa9.8□□□□□ -0.84
LINC01108-201ENST00000427276 RIMBP3BA6NNM3 1639 aa9.8□□□□□ -0.84
LINC01108-201ENST00000427276 RIMBP3Q9UFD9 1639 aa9.8□□□□□ -0.84
LINC01108-201ENST00000427276 FBLN2P98095 1184 aa9.79□□□□□ -0.84
LINC01108-201ENST00000427276 HOMEZQ8IX15 550 aa9.79□□□□□ -0.84
LINC01108-201ENST00000427276 EHBP1L1Q8N3D4 1523 aa9.79□□□□□ -0.84
LINC01108-201ENST00000427276 DNMBPQ6XZF7 1577 aa9.79□□□□□ -0.84
LINC01108-201ENST00000427276 SLKQ9H2G2 1235 aaPredicted RBP9.79□□□□□ -0.84
LINC01108-201ENST00000427276 KTN1Q86UP2 1357 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms