RNA–Protein interactions for RNA: ENST00000426713.1

LINC00116-202, Transcript of Uncharacterized protein encoded by LINC00116, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LINC00116, Length 461 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00116-202ENST00000426713 MAGI2Q86UL8 1455 aa25.15■■□□□ 1.62
LINC00116-202ENST00000426713 CDK13Q14004 1512 aaKnown RBP25.14■■□□□ 1.62
LINC00116-202ENST00000426713 SCAPERQ9BY12 1400 aa25.13■■□□□ 1.61
LINC00116-202ENST00000426713 PLCH2O75038 1416 aa25.08■■□□□ 1.61
LINC00116-202ENST00000426713 EHMT2Q96KQ7 1210 aa25.07■■□□□ 1.6
LINC00116-202ENST00000426713 MYT1LQ9UL68 1186 aa25.06■■□□□ 1.6
LINC00116-202ENST00000426713 ATP10AO60312 1499 aa25.05■■□□□ 1.6
LINC00116-202ENST00000426713 CEBPAP49715 358 aaPredicted RBP25.04■■□□□ 1.6
LINC00116-202ENST00000426713 C9orf84Q5VXU9 1444 aa25.03■■□□□ 1.6
LINC00116-202ENST00000426713 MYO5CQ9NQX4 1742 aa25.03■■□□□ 1.6
LINC00116-202ENST00000426713 EFCAB2Q5VUJ9 269 aa25.03■■□□□ 1.6
LINC00116-202ENST00000426713 PREX1Q8TCU6 1659 aa25.03■■□□□ 1.6
LINC00116-202ENST00000426713 ARHGEF12Q9NZN5 1544 aa25.01■■□□□ 1.59
LINC00116-202ENST00000426713 CDK11AQ9UQ88 783 aaPredicted RBP24.99■■□□□ 1.59
LINC00116-202ENST00000426713 UBTFP17480 764 aaKnown RBP24.98■■□□□ 1.59
LINC00116-202ENST00000426713 DMRT2Q9Y5R5 561 aa24.95■■□□□ 1.58
LINC00116-202ENST00000426713 FMN1Q68DA7 1419 aa24.95■■□□□ 1.58
LINC00116-202ENST00000426713 ARHGAP5Q13017 1502 aa24.94■■□□□ 1.58
LINC00116-202ENST00000426713 KIF14Q15058 1648 aa24.94■■□□□ 1.58
LINC00116-202ENST00000426713 AFAP1Q8N556 730 aa24.93■■□□□ 1.58
LINC00116-202ENST00000426713 ZNF518AQ6AHZ1 1483 aa24.93■■□□□ 1.58
LINC00116-202ENST00000426713 DISP3Q9P2K9 1392 aa24.93■■□□□ 1.58
LINC00116-202ENST00000426713 UHRF1BP1Q6BDS2 1440 aa24.92■■□□□ 1.58
LINC00116-202ENST00000426713 STRCQ7RTU9 1775 aa24.9■■□□□ 1.58
LINC00116-202ENST00000426713 ESF1Q9H501 851 aaKnown RBP24.89■■□□□ 1.58
LINC00116-202ENST00000426713 CLIP1P30622 1438 aa24.87■■□□□ 1.57
LINC00116-202ENST00000426713 SETD1BQ9UPS6 1966 aaKnown RBP24.87■■□□□ 1.57
LINC00116-202ENST00000426713 TROQ12816 1431 aaPredicted RBP24.86■■□□□ 1.57
LINC00116-202ENST00000426713 KDM5CP41229 1560 aa24.84■■□□□ 1.57
LINC00116-202ENST00000426713 ARHGAP35Q9NRY4 1499 aa24.84■■□□□ 1.57
LINC00116-202ENST00000426713 DIP2CQ9Y2E4 1556 aa24.84■■□□□ 1.57
LINC00116-202ENST00000426713 ILDR2Q71H61 639 aa24.81■■□□□ 1.56
LINC00116-202ENST00000426713 C3P01024 1663 aa24.81■■□□□ 1.56
LINC00116-202ENST00000426713 ABCA6Q8N139 1617 aa24.8■■□□□ 1.56
LINC00116-202ENST00000426713 CDC42BPBQ9Y5S2 1711 aa24.79■■□□□ 1.56
LINC00116-202ENST00000426713 LRRIQ1Q96JM4 1722 aa24.77■■□□□ 1.56
LINC00116-202ENST00000426713 REREQ9P2R6 1566 aa24.76■■□□□ 1.55
LINC00116-202ENST00000426713 MLH3Q9UHC1 1453 aa24.75■■□□□ 1.55
LINC00116-202ENST00000426713 PTPRTO14522 1441 aa24.74■■□□□ 1.55
LINC00116-202ENST00000426713 TRAPPC8Q9Y2L5 1435 aa24.73■■□□□ 1.55
LINC00116-202ENST00000426713 SOCS7O14512 581 aa24.73■■□□□ 1.55
LINC00116-202ENST00000426713 PREX2Q70Z35 1606 aa24.72■■□□□ 1.55
LINC00116-202ENST00000426713 ITSN2Q9NZM3 1697 aa24.71■■□□□ 1.55
LINC00116-202ENST00000426713 ABCC1P33527 1531 aa24.71■■□□□ 1.55
LINC00116-202ENST00000426713 SPATA31D1Q6ZQQ2 1576 aa24.7■■□□□ 1.54
LINC00116-202ENST00000426713 AGLP35573 1532 aa24.7■■□□□ 1.54
LINC00116-202ENST00000426713 ZNF777Q9ULD5 760 aaPredicted RBP24.68■■□□□ 1.54
LINC00116-202ENST00000426713 KIDINS220Q9ULH0 1771 aa24.66■■□□□ 1.54
LINC00116-202ENST00000426713 CNTLNQ9NXG0 1405 aa24.66■■□□□ 1.54
LINC00116-202ENST00000426713 LTBP4Q8N2S1 1624 aa24.64■■□□□ 1.53
LINC00116-202ENST00000426713 CCDC18Q5T9S5 1454 aa24.64■■□□□ 1.53
LINC00116-202ENST00000426713 NCOA1Q15788 1441 aa24.63■■□□□ 1.53
LINC00116-202ENST00000426713 CDC42BPAQ5VT25 1732 aa24.63■■□□□ 1.53
LINC00116-202ENST00000426713 CAMSAP1Q5T5Y3 1602 aa24.61■■□□□ 1.53
LINC00116-202ENST00000426713 CASKIN1Q8WXD9 1431 aa24.6■■□□□ 1.53
LINC00116-202ENST00000426713 SUPT6HQ7KZ85 1726 aaKnown RBP24.59■■□□□ 1.53
LINC00116-202ENST00000426713 SPAG9O60271 1321 aaKnown RBP24.58■■□□□ 1.52
LINC00116-202ENST00000426713 SAMD9LQ8IVG5 1584 aa24.57■■□□□ 1.52
LINC00116-202ENST00000426713 NCKAP5LQ9HCH0 1330 aa24.57■■□□□ 1.52
LINC00116-202ENST00000426713 IQSEC2Q5JU85 1478 aa24.57■■□□□ 1.52
LINC00116-202ENST00000426713 MROH2AA6NES4 1674 aa24.56■■□□□ 1.52
LINC00116-202ENST00000426713 ZMYM3Q14202 1370 aa24.56■■□□□ 1.52
LINC00116-202ENST00000426713 NPATQ14207 1427 aa24.55■■□□□ 1.52
LINC00116-202ENST00000426713 HNRNPMP52272 730 aaKnown RBP eCLIP24.55■■□□□ 1.52
LINC00116-202ENST00000426713 SYCP2Q9BX26 1530 aa24.55■■□□□ 1.52
LINC00116-202ENST00000426713 CLTCQ00610 1675 aaKnown RBP24.53■■□□□ 1.52
LINC00116-202ENST00000426713 UBAP1LF5GYI3 381 aa24.52■■□□□ 1.52
LINC00116-202ENST00000426713 ZNF335Q9H4Z2 1342 aaPredicted RBP24.52■■□□□ 1.52
LINC00116-202ENST00000426713 CHIC1Q5VXU3 224 aa24.49■■□□□ 1.51
LINC00116-202ENST00000426713 GGT6Q6P531 493 aa24.49■■□□□ 1.51
LINC00116-202ENST00000426713 ATP7AQ04656 1500 aa24.48■■□□□ 1.51
LINC00116-202ENST00000426713 MYO3AQ8NEV4 1616 aa24.47■■□□□ 1.51
LINC00116-202ENST00000426713 GPATCH8Q9UKJ3 1502 aaKnown RBP24.47■■□□□ 1.51
LINC00116-202ENST00000426713 FYCO1Q9BQS8 1478 aa24.47■■□□□ 1.51
LINC00116-202ENST00000426713 CFDP1Q9UEE9 299 aaPredicted RBP24.46■■□□□ 1.51
LINC00116-202ENST00000426713 PKD2Q13563 968 aa24.45■■□□□ 1.5
LINC00116-202ENST00000426713 A2MP01023 1474 aa24.45■■□□□ 1.5
LINC00116-202ENST00000426713 CEP170BQ9Y4F5 1589 aaPredicted RBP24.44■■□□□ 1.5
LINC00116-202ENST00000426713 ZNF142P52746 1687 aaPredicted RBP24.43■■□□□ 1.5
LINC00116-202ENST00000426713 CCNB3Q8WWL7 1395 aa24.42■■□□□ 1.5
LINC00116-202ENST00000426713 PLEKHH2Q8IVE3 1493 aa24.42■■□□□ 1.5
LINC00116-202ENST00000426713 INO80Q9ULG1 1556 aaPredicted RBP24.42■■□□□ 1.5
LINC00116-202ENST00000426713 SCAF1Q9H7N4 1312 aaKnown RBP24.41■■□□□ 1.5
LINC00116-202ENST00000426713 PLA2R1Q13018 1463 aa24.41■■□□□ 1.5
LINC00116-202ENST00000426713 PTPRKQ15262 1439 aa24.41■■□□□ 1.5
LINC00116-202ENST00000426713 PPP6R1Q9UPN7 881 aa24.4■■□□□ 1.5
LINC00116-202ENST00000426713 PLXNC1O60486 1568 aa24.4■■□□□ 1.5
LINC00116-202ENST00000426713 KIAA1107Q9UPP5 1409 aa24.39■■□□□ 1.5
LINC00116-202ENST00000426713 TCOF1Q13428 1488 aaKnown RBP24.36■■□□□ 1.49
LINC00116-202ENST00000426713 ADGBQ8N7X0 1667 aa24.35■■□□□ 1.49
LINC00116-202ENST00000426713 MTUS2Q5JR59 1369 aa24.35■■□□□ 1.49
LINC00116-202ENST00000426713 PIP4K2BP78356 416 aa24.33■■□□□ 1.49
LINC00116-202ENST00000426713 A2ML1A8K2U0 1454 aa24.31■■□□□ 1.48
LINC00116-202ENST00000426713 ZNF644Q9H582 1327 aaPredicted RBP24.31■■□□□ 1.48
LINC00116-202ENST00000426713 DNMT1P26358 1616 aaKnown RBP24.29■■□□□ 1.48
LINC00116-202ENST00000426713 HSPA1LP34931 641 aa24.26■■□□□ 1.47
LINC00116-202ENST00000426713 POLR1AO95602 1720 aaPredicted RBP24.26■■□□□ 1.47
LINC00116-202ENST00000426713 TOM1O60784 492 aa24.25■■□□□ 1.47
LINC00116-202ENST00000426713 KIF3BO15066 747 aa24.24■■□□□ 1.47
LINC00116-202ENST00000426713 FBXO31Q5XUX0 539 aaPredicted RBP24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms