RNA–Protein interactions for RNA: ENST00000425006.3

VSTM1-205, Transcript of V-set and transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VSTM1, Length 608 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-205ENST00000425006 ARHGEF12Q9NZN5 1544 aa19.47■□□□□ 0.71
VSTM1-205ENST00000425006 MAGI2Q86UL8 1455 aa19.47■□□□□ 0.71
VSTM1-205ENST00000425006 CFAP74Q9C0B2 1584 aa19.44■□□□□ 0.7
VSTM1-205ENST00000425006 UBAP1LF5GYI3 381 aa19.42■□□□□ 0.7
VSTM1-205ENST00000425006 HECW1Q76N89 1606 aa19.42■□□□□ 0.7
VSTM1-205ENST00000425006 RAPGEF6Q8TEU7 1601 aa19.4■□□□□ 0.7
VSTM1-205ENST00000425006 ATP10AO60312 1499 aa19.39■□□□□ 0.69
VSTM1-205ENST00000425006 C9orf84Q5VXU9 1444 aa19.37■□□□□ 0.69
VSTM1-205ENST00000425006 PLEKHD1A6NEE1 506 aa19.36■□□□□ 0.69
VSTM1-205ENST00000425006 SETD1BQ9UPS6 1966 aaKnown RBP19.35■□□□□ 0.69
VSTM1-205ENST00000425006 MED1Q15648 1581 aaPredicted RBP19.34■□□□□ 0.69
VSTM1-205ENST00000425006 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.34■□□□□ 0.69
VSTM1-205ENST00000425006 NUP153P49790 1475 aaKnown RBP19.34■□□□□ 0.69
VSTM1-205ENST00000425006 SCAPERQ9BY12 1400 aa19.34■□□□□ 0.69
VSTM1-205ENST00000425006 NCOA1Q15788 1441 aa19.33■□□□□ 0.68
VSTM1-205ENST00000425006 ZNF335Q9H4Z2 1342 aaPredicted RBP19.29■□□□□ 0.68
VSTM1-205ENST00000425006 PRXQ9BXM0 1461 aa19.28■□□□□ 0.68
VSTM1-205ENST00000425006 HSPA1LP34931 641 aa19.26■□□□□ 0.67
VSTM1-205ENST00000425006 SAMD9Q5K651 1589 aa19.26■□□□□ 0.67
VSTM1-205ENST00000425006 SCAF1Q9H7N4 1312 aaKnown RBP19.25■□□□□ 0.67
VSTM1-205ENST00000425006 TRAPPC8Q9Y2L5 1435 aa19.25■□□□□ 0.67
VSTM1-205ENST00000425006 C3P01024 1663 aa19.25■□□□□ 0.67
VSTM1-205ENST00000425006 PHF23Q9BUL5 403 aaPredicted RBP19.25■□□□□ 0.67
VSTM1-205ENST00000425006 ESF1Q9H501 851 aaKnown RBP19.24■□□□□ 0.67
VSTM1-205ENST00000425006 NCKAP5LQ9HCH0 1330 aa19.22■□□□□ 0.67
VSTM1-205ENST00000425006 CAMSAP1Q5T5Y3 1602 aa19.22■□□□□ 0.67
VSTM1-205ENST00000425006 PLCH2O75038 1416 aa19.21■□□□□ 0.67
VSTM1-205ENST00000425006 PIP4K2BP78356 416 aa19.2■□□□□ 0.66
VSTM1-205ENST00000425006 MYT1LQ9UL68 1186 aa19.2■□□□□ 0.66
VSTM1-205ENST00000425006 EFCAB2Q5VUJ9 269 aa19.17■□□□□ 0.66
VSTM1-205ENST00000425006 ZNF518AQ6AHZ1 1483 aa19.16■□□□□ 0.66
VSTM1-205ENST00000425006 CHIC1Q5VXU3 224 aa19.16■□□□□ 0.66
VSTM1-205ENST00000425006 RANGAP1P46060 587 aaPredicted RBP19.15■□□□□ 0.66
VSTM1-205ENST00000425006 AFAP1Q8N556 730 aa19.15■□□□□ 0.66
VSTM1-205ENST00000425006 DIP2CQ9Y2E4 1556 aa19.14■□□□□ 0.65
VSTM1-205ENST00000425006 REREQ9P2R6 1566 aa19.11■□□□□ 0.65
VSTM1-205ENST00000425006 TOM1O60784 492 aa19.11■□□□□ 0.65
VSTM1-205ENST00000425006 KDM5CP41229 1560 aa19.1■□□□□ 0.65
VSTM1-205ENST00000425006 CNTLNQ9NXG0 1405 aa19.1■□□□□ 0.65
VSTM1-205ENST00000425006 PKD2Q13563 968 aa19.1■□□□□ 0.65
VSTM1-205ENST00000425006 AGLP35573 1532 aa19.1■□□□□ 0.65
VSTM1-205ENST00000425006 EEA1Q15075 1411 aa19.09■□□□□ 0.65
VSTM1-205ENST00000425006 NPATQ14207 1427 aa19.08■□□□□ 0.65
VSTM1-205ENST00000425006 CDK13Q14004 1512 aaKnown RBP19.08■□□□□ 0.64
VSTM1-205ENST00000425006 ABCA6Q8N139 1617 aa19.07■□□□□ 0.64
VSTM1-205ENST00000425006 CSRNP3Q8WYN3 585 aa19.07■□□□□ 0.64
VSTM1-205ENST00000425006 PPP6R1Q9UPN7 881 aa19.07■□□□□ 0.64
VSTM1-205ENST00000425006 MYO5CQ9NQX4 1742 aa19.06■□□□□ 0.64
VSTM1-205ENST00000425006 PLA2R1Q13018 1463 aa19.05■□□□□ 0.64
VSTM1-205ENST00000425006 TCOF1Q13428 1488 aaKnown RBP19.04■□□□□ 0.64
VSTM1-205ENST00000425006 MLH3Q9UHC1 1453 aa19.03■□□□□ 0.64
VSTM1-205ENST00000425006 ARHGAP5Q13017 1502 aa19.02■□□□□ 0.64
VSTM1-205ENST00000425006 ZMYM3Q14202 1370 aa19.01■□□□□ 0.63
VSTM1-205ENST00000425006 SENP3Q9H4L4 574 aaPredicted RBP18.99■□□□□ 0.63
VSTM1-205ENST00000425006 MROH2AA6NES4 1674 aa18.98■□□□□ 0.63
VSTM1-205ENST00000425006 SUPT6HQ7KZ85 1726 aaKnown RBP18.98■□□□□ 0.63
VSTM1-205ENST00000425006 MYO3AQ8NEV4 1616 aa18.98■□□□□ 0.63
VSTM1-205ENST00000425006 CPS1P31327 1500 aa18.98■□□□□ 0.63
VSTM1-205ENST00000425006 ZNF142P52746 1687 aaPredicted RBP18.98■□□□□ 0.63
VSTM1-205ENST00000425006 CEP170BQ9Y4F5 1589 aaPredicted RBP18.98■□□□□ 0.63
VSTM1-205ENST00000425006 PTPRKQ15262 1439 aa18.95■□□□□ 0.62
VSTM1-205ENST00000425006 KIF14Q15058 1648 aa18.95■□□□□ 0.62
VSTM1-205ENST00000425006 RGS17Q9UGC6 210 aaPredicted RBP18.94■□□□□ 0.62
VSTM1-205ENST00000425006 ATP1B4Q9UN42 357 aaPredicted RBP18.94■□□□□ 0.62
VSTM1-205ENST00000425006 SHANK2Q9UPX8 1470 aa18.93■□□□□ 0.62
VSTM1-205ENST00000425006 CDK11AQ9UQ88 783 aaPredicted RBP18.93■□□□□ 0.62
VSTM1-205ENST00000425006 ALKQ9UM73 1620 aa18.89■□□□□ 0.62
VSTM1-205ENST00000425006 KIDINS220Q9ULH0 1771 aa18.88■□□□□ 0.61
VSTM1-205ENST00000425006 ABCC1P33527 1531 aa18.87■□□□□ 0.61
VSTM1-205ENST00000425006 CLTCQ00610 1675 aaKnown RBP18.87■□□□□ 0.61
VSTM1-205ENST00000425006 TROQ12816 1431 aaPredicted RBP18.86■□□□□ 0.61
VSTM1-205ENST00000425006 CLIP1P30622 1438 aa18.85■□□□□ 0.61
VSTM1-205ENST00000425006 A2ML1A8K2U0 1454 aa18.84■□□□□ 0.61
VSTM1-205ENST00000425006 CDC42BPBQ9Y5S2 1711 aa18.83■□□□□ 0.61
VSTM1-205ENST00000425006 ITSN2Q9NZM3 1697 aa18.83■□□□□ 0.61
VSTM1-205ENST00000425006 DNMT1P26358 1616 aaKnown RBP18.83■□□□□ 0.61
VSTM1-205ENST00000425006 NEURL4Q96JN8 1562 aa18.83■□□□□ 0.6
VSTM1-205ENST00000425006 POLR1AO95602 1720 aaPredicted RBP18.81■□□□□ 0.6
VSTM1-205ENST00000425006 POTEAQ6S8J7 498 aa18.81■□□□□ 0.6
VSTM1-205ENST00000425006 VWDEQ8N2E2 1590 aa18.81■□□□□ 0.6
VSTM1-205ENST00000425006 GGT6Q6P531 493 aa18.8■□□□□ 0.6
VSTM1-205ENST00000425006 PREX2Q70Z35 1606 aa18.78■□□□□ 0.6
VSTM1-205ENST00000425006 SAMD9LQ8IVG5 1584 aa18.77■□□□□ 0.6
VSTM1-205ENST00000425006 SPAG9O60271 1321 aaKnown RBP18.76■□□□□ 0.59
VSTM1-205ENST00000425006 FMN1Q68DA7 1419 aa18.76■□□□□ 0.59
VSTM1-205ENST00000425006 ANKLE2Q86XL3 938 aa18.76■□□□□ 0.59
VSTM1-205ENST00000425006 RNF17Q9BXT8 1623 aaKnown RBP18.73■□□□□ 0.59
VSTM1-205ENST00000425006 A2MP01023 1474 aa18.72■□□□□ 0.59
VSTM1-205ENST00000425006 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.72■□□□□ 0.59
VSTM1-205ENST00000425006 LRRC7Q96NW7 1537 aa18.72■□□□□ 0.59
VSTM1-205ENST00000425006 NPHP4O75161 1426 aaPredicted RBP18.72■□□□□ 0.59
VSTM1-205ENST00000425006 PLXNC1O60486 1568 aa18.72■□□□□ 0.59
VSTM1-205ENST00000425006 ZNF777Q9ULD5 760 aaPredicted RBP18.71■□□□□ 0.59
VSTM1-205ENST00000425006 TNRQ92752 1358 aa18.7■□□□□ 0.58
VSTM1-205ENST00000425006 SETD1AO15047 1707 aaKnown RBP18.7■□□□□ 0.58
VSTM1-205ENST00000425006 EHMT2Q96KQ7 1210 aa18.69■□□□□ 0.58
VSTM1-205ENST00000425006 SRCAPQ6ZRS2 3230 aa18.69■□□□□ 0.58
VSTM1-205ENST00000425006 ATP7AQ04656 1500 aa18.69■□□□□ 0.58
VSTM1-205ENST00000425006 UBTFP17480 764 aaKnown RBP18.68■□□□□ 0.58
VSTM1-205ENST00000425006 HNRNPMP52272 730 aaKnown RBP eCLIP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms