RNA–Protein interactions for RNA: ENST00000424408.6

LAMA4-207, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LAMA4, Length 5,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-207ENST00000424408 RCAN3Q9UKA8 241 aa15.26■□□□□ 0.03
LAMA4-207ENST00000424408 TPM4P67936 248 aa15.25■□□□□ 0.03
LAMA4-207ENST00000424408 HAP1P54257 671 aaPredicted RBP15.25■□□□□ 0.03
LAMA4-207ENST00000424408 FOXD4L1Q9NU39 408 aa15.24■□□□□ 0.03
LAMA4-207ENST00000424408 KIAA1211Q6ZU35 1233 aa15.24■□□□□ 0.03
LAMA4-207ENST00000424408 CALD1Q05682 793 aaKnown RBP15.24■□□□□ 0.03
LAMA4-207ENST00000424408 RWDD1Q9H446 243 aaPredicted RBP15.23■□□□□ 0.03
LAMA4-207ENST00000424408 TMF1P82094 1093 aa15.23■□□□□ 0.03
LAMA4-207ENST00000424408 HTATSF1O43719 755 aaKnown RBP15.23■□□□□ 0.03
LAMA4-207ENST00000424408 A0A0U1RQG5 324 aaPredicted RBP15.23■□□□□ 0.03
LAMA4-207ENST00000424408 KCNH8Q96L42 1107 aa15.22■□□□□ 0.03
LAMA4-207ENST00000424408 POGKQ9P215 609 aa15.22■□□□□ 0.03
LAMA4-207ENST00000424408 ITPRIPQ8IWB1 547 aa15.21■□□□□ 0.03
LAMA4-207ENST00000424408 SETQ01105 290 aaPredicted RBP15.21■□□□□ 0.03
LAMA4-207ENST00000424408 NPHP1O15259 732 aa15.2■□□□□ 0.02
LAMA4-207ENST00000424408 HSPA5P11021 654 aaKnown RBP15.2■□□□□ 0.02
LAMA4-207ENST00000424408 HSP90B1P14625 803 aaKnown RBP15.2■□□□□ 0.02
LAMA4-207ENST00000424408 CFDP1Q9UEE9 299 aaPredicted RBP15.18■□□□□ 0.02
LAMA4-207ENST00000424408 IPO8O15397 1037 aaKnown RBP15.18■□□□□ 0.02
LAMA4-207ENST00000424408 PLEKHD1A6NEE1 506 aa15.17■□□□□ 0.02
LAMA4-207ENST00000424408 ZNF771Q7L3S4 317 aaPredicted RBP15.17■□□□□ 0.02
LAMA4-207ENST00000424408 MORC1Q86VD1 984 aa15.17■□□□□ 0.02
LAMA4-207ENST00000424408 GSE1Q14687 1217 aa15.17■□□□□ 0.02
LAMA4-207ENST00000424408 PMFBP1Q8TBY8 1022 aa15.17■□□□□ 0.02
LAMA4-207ENST00000424408 KTN1Q86UP2 1357 aaKnown RBP15.17■□□□□ 0.02
LAMA4-207ENST00000424408 USP35Q9P2H5 1018 aa15.16■□□□□ 0.02
LAMA4-207ENST00000424408 TIMELESSQ9UNS1 1208 aa15.16■□□□□ 0.02
LAMA4-207ENST00000424408 CSPP1Q1MSJ5 1256 aa15.16■□□□□ 0.02
LAMA4-207ENST00000424408 CHMP7Q8WUX9 453 aaPredicted RBP15.16■□□□□ 0.02
LAMA4-207ENST00000424408 NOL8Q76FK4 1167 aaKnown RBP15.15■□□□□ 0.02
LAMA4-207ENST00000424408 DCAF11Q8TEB1 546 aa15.15■□□□□ 0.02
LAMA4-207ENST00000424408 LMOD2Q6P5Q4 547 aa15.15■□□□□ 0.02
LAMA4-207ENST00000424408 ISY1Q9ULR0 285 aaKnown RBP15.15■□□□□ 0.02
LAMA4-207ENST00000424408 DDX11L8A8MPP1 907 aa15.15■□□□□ 0.02
LAMA4-207ENST00000424408 PHF14O94880 888 aa15.15■□□□□ 0.02
LAMA4-207ENST00000424408 EEA1Q15075 1411 aa15.15■□□□□ 0.02
LAMA4-207ENST00000424408 PDE4CQ08493 712 aa15.14■□□□□ 0.01
LAMA4-207ENST00000424408 FOXD4L5Q5VV16 416 aaPredicted RBP15.14■□□□□ 0.01
LAMA4-207ENST00000424408 FOXD4L4Q8WXT5 416 aaPredicted RBP15.14■□□□□ 0.01
LAMA4-207ENST00000424408 TNIKQ9UKE5 1360 aa15.13■□□□□ 0.01
LAMA4-207ENST00000424408 SLC4A3P48751 1232 aa15.12■□□□□ 0.01
LAMA4-207ENST00000424408 CREBRFQ8IUR6 639 aa15.11■□□□□ 0.01
LAMA4-207ENST00000424408 SOX12O15370 315 aa15.09■□□□□ 0.01
LAMA4-207ENST00000424408 RTF1Q92541 710 aaKnown RBP15.09■□□□□ 0.01
LAMA4-207ENST00000424408 TRIM6-TRIM34B2RNG4 842 aa15.09■□□□□ 0.01
LAMA4-207ENST00000424408 TPM3P06753 285 aa15.09■□□□□ 0.01
LAMA4-207ENST00000424408 CCNB3Q8WWL7 1395 aa15.09■□□□□ 0.01
LAMA4-207ENST00000424408 CCAR2Q8N163 923 aaKnown RBP15.07■□□□□ 0
LAMA4-207ENST00000424408 FAM13BQ9NYF5 915 aa15.07■□□□□ 0
LAMA4-207ENST00000424408 SRPK2P78362 688 aaKnown RBP15.06■□□□□ 0
LAMA4-207ENST00000424408 PATL2C9JE40 543 aaKnown RBP15.06■□□□□ 0
LAMA4-207ENST00000424408 CEP164Q9UPV0 1460 aa15.06■□□□□ 0
LAMA4-207ENST00000424408 RB1CC1Q8TDY2 1594 aa15.06■□□□□ 0
LAMA4-207ENST00000424408 RALBP1Q15311 655 aa15.06■□□□□ 0
LAMA4-207ENST00000424408 DDX49Q9Y6V7 483 aaKnown RBP15.06■□□□□ 0
LAMA4-207ENST00000424408 ST18O60284 1047 aa15.05■□□□□ -0
LAMA4-207ENST00000424408 CALRP27797 417 aaKnown RBP15.05■□□□□ -0
LAMA4-207ENST00000424408 CCDC34Q96HJ3 373 aa15.04■□□□□ -0
LAMA4-207ENST00000424408 PDE4AP27815 886 aa15.04■□□□□ -0
LAMA4-207ENST00000424408 ZNF592Q92610 1267 aa15.04■□□□□ -0
LAMA4-207ENST00000424408 SKOR2Q2VWA4 1001 aaPredicted RBP15.04■□□□□ -0
LAMA4-207ENST00000424408 SMC4Q9NTJ3 1288 aa15.04■□□□□ -0
LAMA4-207ENST00000424408 SETD5Q9C0A6 1442 aa15.03■□□□□ -0
LAMA4-207ENST00000424408 GPS2Q13227 327 aa15.03■□□□□ -0
LAMA4-207ENST00000424408 U2AF1L5P0DN76 240 aaPredicted RBP15.03■□□□□ -0
LAMA4-207ENST00000424408 U2AF1Q01081 240 aaKnown RBP eCLIP15.03■□□□□ -0
LAMA4-207ENST00000424408 RASSF8Q8NHQ8 419 aa15.02■□□□□ -0
LAMA4-207ENST00000424408 CLUAP1Q96AJ1 413 aa15.02□□□□□ -0.01
LAMA4-207ENST00000424408 GPATCH3Q96I76 525 aa15.02□□□□□ -0.01
LAMA4-207ENST00000424408 SAFB2Q14151 953 aaKnown RBP eCLIP15.02□□□□□ -0.01
LAMA4-207ENST00000424408 PRM3Q9NNZ6 103 aa15.01□□□□□ -0.01
LAMA4-207ENST00000424408 KIF16BQ96L93 1317 aa15.01□□□□□ -0.01
LAMA4-207ENST00000424408 FAM161AQ3B820 660 aa15.01□□□□□ -0.01
LAMA4-207ENST00000424408 GOLGA6L19H0YKK7 550 aa14.99□□□□□ -0.01
LAMA4-207ENST00000424408 CCDC146Q8IYE0 955 aa14.99□□□□□ -0.01
LAMA4-207ENST00000424408 FOXD4L6Q3SYB3 417 aaPredicted RBP14.99□□□□□ -0.01
LAMA4-207ENST00000424408 TEX35Q5T0J7 233 aa14.99□□□□□ -0.01
LAMA4-207ENST00000424408 FOXD4L3Q6VB84 417 aaPredicted RBP14.99□□□□□ -0.01
LAMA4-207ENST00000424408 CENPJQ9HC77 1338 aaPredicted RBP14.99□□□□□ -0.01
LAMA4-207ENST00000424408 FANCIQ9NVI1 1328 aa14.99□□□□□ -0.01
LAMA4-207ENST00000424408 SF3A1Q15459 793 aaKnown RBP14.98□□□□□ -0.01
LAMA4-207ENST00000424408 HMMRO75330 724 aa14.98□□□□□ -0.01
LAMA4-207ENST00000424408 PES1O00541 588 aaKnown RBP14.97□□□□□ -0.01
LAMA4-207ENST00000424408 FOXD1Q16676 465 aa14.97□□□□□ -0.01
LAMA4-207ENST00000424408 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.97□□□□□ -0.01
LAMA4-207ENST00000424408 CENPQQ7L2Z9 268 aaPredicted RBP14.97□□□□□ -0.01
LAMA4-207ENST00000424408 ROCK2O75116 1388 aaKnown RBP14.97□□□□□ -0.01
LAMA4-207ENST00000424408 CEP89Q96ST8 783 aa14.96□□□□□ -0.01
LAMA4-207ENST00000424408 TPD52L1Q16890 204 aaPredicted RBP14.96□□□□□ -0.01
LAMA4-207ENST00000424408 WRNQ14191 1432 aaPredicted RBP eCLIP14.96□□□□□ -0.02
LAMA4-207ENST00000424408 BECN2A8MW95 431 aa14.95□□□□□ -0.02
LAMA4-207ENST00000424408 H3BQV1 296 aa14.95□□□□□ -0.02
LAMA4-207ENST00000424408 GORABQ5T7V8 394 aa14.95□□□□□ -0.02
LAMA4-207ENST00000424408 IFFO2Q5TF58 517 aa14.95□□□□□ -0.02
LAMA4-207ENST00000424408 CCDC70Q6NSX1 233 aa14.95□□□□□ -0.02
LAMA4-207ENST00000424408 HDGFL2Q7Z4V5 671 aaPredicted RBP14.95□□□□□ -0.02
LAMA4-207ENST00000424408 FAM43AQ8N2R8 423 aa14.94□□□□□ -0.02
LAMA4-207ENST00000424408 SLC4A10Q6U841 1118 aa14.94□□□□□ -0.02
LAMA4-207ENST00000424408 ANO8Q9HCE9 1232 aaPredicted RBP14.94□□□□□ -0.02
LAMA4-207ENST00000424408 PDE3BQ13370 1112 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms