RNA–Protein interactions for RNA: ENST00000422748.5

CALD1-205, Transcript of caldesmon 1, humanhuman

TSL 2 BASIC

Gene CALD1, Length 2,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-205ENST00000422748 RNF123Q5XPI4 1314 aa17.76■□□□□ 0.43
CALD1-205ENST00000422748 ERCC6Q03468 1493 aa17.76■□□□□ 0.43
CALD1-205ENST00000422748 IFT140Q96RY7 1462 aa17.76■□□□□ 0.43
CALD1-205ENST00000422748 PPM1GO15355 546 aaPredicted RBP17.76■□□□□ 0.43
CALD1-205ENST00000422748 AQRO60306 1485 aaKnown RBP eCLIP17.75■□□□□ 0.435e-16■■□□□ 11.9
CALD1-205ENST00000422748 PBRM1Q86U86 1689 aa17.75■□□□□ 0.43
CALD1-205ENST00000422748 GSE1Q14687 1217 aa17.74■□□□□ 0.43
CALD1-205ENST00000422748 CTTNBP2Q8WZ74 1663 aa17.73■□□□□ 0.43
CALD1-205ENST00000422748 NUDCQ9Y266 331 aa17.73■□□□□ 0.43
CALD1-205ENST00000422748 ZNF608Q9ULD9 1512 aaPredicted RBP17.72■□□□□ 0.43
CALD1-205ENST00000422748 CCDC18Q5T9S5 1454 aa17.71■□□□□ 0.43
CALD1-205ENST00000422748 PKNOX2Q96KN3 472 aa17.7■□□□□ 0.42
CALD1-205ENST00000422748 UACAQ9BZF9 1416 aa17.69■□□□□ 0.42
CALD1-205ENST00000422748 PDE4AP27815 886 aa17.69■□□□□ 0.42
CALD1-205ENST00000422748 EIF4G2P78344 907 aaKnown RBP eCLIP17.69■□□□□ 0.42
CALD1-205ENST00000422748 GRIN2BQ13224 1484 aa17.68■□□□□ 0.42
CALD1-205ENST00000422748 ADAMTS12P58397 1594 aa17.68■□□□□ 0.42
CALD1-205ENST00000422748 CFAP43Q8NDM7 1665 aa17.67■□□□□ 0.42
CALD1-205ENST00000422748 TCERG1O14776 1098 aaKnown RBP17.66■□□□□ 0.42
CALD1-205ENST00000422748 CCDC7Q96M83 1385 aa17.66■□□□□ 0.42
CALD1-205ENST00000422748 FRAT1Q92837 279 aaPredicted RBP17.65■□□□□ 0.42
CALD1-205ENST00000422748 RSPH6AQ9H0K4 717 aa17.65■□□□□ 0.42
CALD1-205ENST00000422748 EFCAB5A4FU69 1503 aa17.65■□□□□ 0.42
CALD1-205ENST00000422748 BACH2Q9BYV9 841 aa17.65■□□□□ 0.42
CALD1-205ENST00000422748 NCOA1Q15788 1441 aa17.63■□□□□ 0.41
CALD1-205ENST00000422748 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.63■□□□□ 0.41
CALD1-205ENST00000422748 EIF4G3O43432 1585 aaKnown RBP17.63■□□□□ 0.41
CALD1-205ENST00000422748 NFKBIBQ15653 356 aa17.62■□□□□ 0.41
CALD1-205ENST00000422748 SENP3-EIF4A1A0A087X0R7 540 aa17.61■□□□□ 0.41
CALD1-205ENST00000422748 PTPN23Q9H3S7 1636 aa17.61■□□□□ 0.41
CALD1-205ENST00000422748 SAMD9Q5K651 1589 aa17.6■□□□□ 0.41
CALD1-205ENST00000422748 AEBP2Q6ZN18 517 aaPredicted RBP17.6■□□□□ 0.41
CALD1-205ENST00000422748 FHOD3Q2V2M9 1422 aa17.6■□□□□ 0.41
CALD1-205ENST00000422748 ATP1B4Q9UN42 357 aaPredicted RBP17.59■□□□□ 0.41
CALD1-205ENST00000422748 HFM1A2PYH4 1435 aa17.59■□□□□ 0.41
CALD1-205ENST00000422748 PCF11O94913 1555 aaKnown RBP17.59■□□□□ 0.41
CALD1-205ENST00000422748 PTPRKQ15262 1439 aa17.57■□□□□ 0.4
CALD1-205ENST00000422748 P3H3Q8IVL6 736 aa17.57■□□□□ 0.4
CALD1-205ENST00000422748 FAM43AQ8N2R8 423 aa17.57■□□□□ 0.4
CALD1-205ENST00000422748 KCNA4P22459 653 aa17.56■□□□□ 0.4
CALD1-205ENST00000422748 EXOC6Q8TAG9 804 aa17.56■□□□□ 0.4
CALD1-205ENST00000422748 MS4A1P11836 297 aa17.56■□□□□ 0.4
CALD1-205ENST00000422748 SNAPC4Q5SXM2 1469 aa17.56■□□□□ 0.4
CALD1-205ENST00000422748 DDRGK1Q96HY6 314 aa17.55■□□□□ 0.4
CALD1-205ENST00000422748 PDIA4P13667 645 aaKnown RBP17.55■□□□□ 0.4
CALD1-205ENST00000422748 TAOK2Q9UL54 1235 aa17.54■□□□□ 0.4
CALD1-205ENST00000422748 FGD6Q6ZV73 1430 aa17.54■□□□□ 0.4
CALD1-205ENST00000422748 CNGB1Q14028 1251 aaPredicted RBP17.54■□□□□ 0.4
CALD1-205ENST00000422748 NAIPQ13075 1403 aa17.53■□□□□ 0.4
CALD1-205ENST00000422748 SLC4A3P48751 1232 aa17.52■□□□□ 0.4
CALD1-205ENST00000422748 KIF7Q2M1P5 1343 aa17.52■□□□□ 0.4
CALD1-205ENST00000422748 CASKIN1Q8WXD9 1431 aa17.51■□□□□ 0.39
CALD1-205ENST00000422748 RRP1P56182 461 aaKnown RBP17.51■□□□□ 0.39
CALD1-205ENST00000422748 DCAF11Q8TEB1 546 aa17.51■□□□□ 0.39
CALD1-205ENST00000422748 FYCO1Q9BQS8 1478 aa17.51■□□□□ 0.39
CALD1-205ENST00000422748 IQGAP2Q13576 1575 aa17.51■□□□□ 0.39
CALD1-205ENST00000422748 MAGI1Q96QZ7 1491 aaPredicted RBP17.5■□□□□ 0.39
CALD1-205ENST00000422748 FMN1Q68DA7 1419 aa17.49■□□□□ 0.39
CALD1-205ENST00000422748 GRIN2AQ12879 1464 aa17.49■□□□□ 0.39
CALD1-205ENST00000422748 L3MBTL2Q969R5 705 aa17.47■□□□□ 0.39
CALD1-205ENST00000422748 POLR1AO95602 1720 aaPredicted RBP17.46■□□□□ 0.39
CALD1-205ENST00000422748 GLIPR1L2Q4G1C9 344 aa17.46■□□□□ 0.39
CALD1-205ENST00000422748 DENND4BO75064 1496 aaPredicted RBP17.46■□□□□ 0.39
CALD1-205ENST00000422748 SKAP1Q86WV1 359 aa17.45■□□□□ 0.38
CALD1-205ENST00000422748 UGGT2Q9NYU1 1516 aa17.45■□□□□ 0.38
CALD1-205ENST00000422748 KIAA0586Q9BVV6 1533 aa17.45■□□□□ 0.38
CALD1-205ENST00000422748 DHX29Q7Z478 1369 aaKnown RBP17.44■□□□□ 0.38
CALD1-205ENST00000422748 SYNJ2O15056 1496 aa17.44■□□□□ 0.38
CALD1-205ENST00000422748 FRAT2O75474 233 aaPredicted RBP17.44■□□□□ 0.38
CALD1-205ENST00000422748 ZMYND15Q9H091 742 aa17.43■□□□□ 0.38
CALD1-205ENST00000422748 NBPF8Q3BBV2 869 aa17.42■□□□□ 0.38
CALD1-205ENST00000422748 VSIG10Q8N0Z9 540 aa17.42■□□□□ 0.38
CALD1-205ENST00000422748 PNISRQ8TF01 805 aaKnown RBP17.42■□□□□ 0.38
CALD1-205ENST00000422748 LRRIQ1Q96JM4 1722 aa17.41■□□□□ 0.38
CALD1-205ENST00000422748 SPATA31E1Q6ZUB1 1445 aa17.4■□□□□ 0.38
CALD1-205ENST00000422748 RCAN3Q9UKA8 241 aa17.4■□□□□ 0.38
CALD1-205ENST00000422748 RRAGDQ9NQL2 400 aaPredicted RBP17.4■□□□□ 0.38
CALD1-205ENST00000422748 CEP170Q5SW79 1584 aa17.39■□□□□ 0.38
CALD1-205ENST00000422748 HECW1Q76N89 1606 aa17.39■□□□□ 0.37
CALD1-205ENST00000422748 DISP1Q96F81 1524 aa17.37■□□□□ 0.37
CALD1-205ENST00000422748 RRP7BPQ9NSQ0 103 aa17.37■□□□□ 0.37
CALD1-205ENST00000422748 NUP160Q12769 1436 aa17.37■□□□□ 0.37
CALD1-205ENST00000422748 TMC1Q8TDI8 760 aa17.36■□□□□ 0.37
CALD1-205ENST00000422748 CHMP7Q8WUX9 453 aaPredicted RBP17.36■□□□□ 0.37
CALD1-205ENST00000422748 PDE4CQ08493 712 aa17.36■□□□□ 0.37
CALD1-205ENST00000422748 POLR3GLQ9BT43 218 aa17.35■□□□□ 0.37
CALD1-205ENST00000422748 FOXD1Q16676 465 aa17.35■□□□□ 0.37
CALD1-205ENST00000422748 KIAA0556O60303 1618 aa17.35■□□□□ 0.37
CALD1-205ENST00000422748 MTUS2Q5JR59 1369 aa17.33■□□□□ 0.36
CALD1-205ENST00000422748 MPHOSPH9Q99550 1183 aa17.32■□□□□ 0.36
CALD1-205ENST00000422748 CHIC2Q9UKJ5 165 aa17.32■□□□□ 0.36
CALD1-205ENST00000422748 LRPPRCP42704 1394 aaKnown RBP17.31■□□□□ 0.36
CALD1-205ENST00000422748 KDM6BO15054 1643 aa17.31■□□□□ 0.36
CALD1-205ENST00000422748 MYOM3Q5VTT5 1437 aa17.31■□□□□ 0.36
CALD1-205ENST00000422748 PLIN1O60240 522 aa17.3■□□□□ 0.36
CALD1-205ENST00000422748 TPRNQ4KMQ1 711 aa17.3■□□□□ 0.36
CALD1-205ENST00000422748 GCC2Q8IWJ2 1684 aa17.3■□□□□ 0.36
CALD1-205ENST00000422748 TEX14Q8IWB6 1497 aa17.29■□□□□ 0.36
CALD1-205ENST00000422748 FBLN2P98095 1184 aa17.28■□□□□ 0.36
CALD1-205ENST00000422748 CRBNQ96SW2 442 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms