RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 ATP10BO94823 1461 aa20.97■□□□□ 0.95
HLA-DPA1-242ENST00000419277 ABCC10Q5T3U5 1492 aa20.96■□□□□ 0.95
HLA-DPA1-242ENST00000419277 PLEKHD1A6NEE1 506 aa20.94■□□□□ 0.94
HLA-DPA1-242ENST00000419277 TONSLQ96HA7 1378 aa20.94■□□□□ 0.94
HLA-DPA1-242ENST00000419277 CLASP1Q7Z460 1538 aa20.92■□□□□ 0.94
HLA-DPA1-242ENST00000419277 ARHGEF5Q12774 1597 aa20.92■□□□□ 0.94
HLA-DPA1-242ENST00000419277 CFDP1Q9UEE9 299 aaPredicted RBP20.91■□□□□ 0.94
HLA-DPA1-242ENST00000419277 ABCC2Q92887 1545 aa20.91■□□□□ 0.94
HLA-DPA1-242ENST00000419277 PREX2Q70Z35 1606 aa20.9■□□□□ 0.94
HLA-DPA1-242ENST00000419277 PPP1R15AO75807 674 aaPredicted RBP20.87■□□□□ 0.93
HLA-DPA1-242ENST00000419277 KDM6BO15054 1643 aa20.86■□□□□ 0.93
HLA-DPA1-242ENST00000419277 NCOA1Q15788 1441 aa20.85■□□□□ 0.93
HLA-DPA1-242ENST00000419277 ARID3CA6NKF2 412 aa20.85■□□□□ 0.93
HLA-DPA1-242ENST00000419277 UHRF1BP1LA0JNW5 1464 aa20.85■□□□□ 0.93
HLA-DPA1-242ENST00000419277 RRP7BPQ9NSQ0 103 aa20.84■□□□□ 0.93
HLA-DPA1-242ENST00000419277 ANKRD30AQ9BXX3 1397 aa20.84■□□□□ 0.93
HLA-DPA1-242ENST00000419277 SIN3AQ96ST3 1273 aa20.84■□□□□ 0.93
HLA-DPA1-242ENST00000419277 DENND4BO75064 1496 aaPredicted RBP20.82■□□□□ 0.92
HLA-DPA1-242ENST00000419277 NEUROD1Q13562 356 aa20.81■□□□□ 0.92
HLA-DPA1-242ENST00000419277 RSPH4AQ5TD94 716 aa20.8■□□□□ 0.92
HLA-DPA1-242ENST00000419277 CHIC2Q9UKJ5 165 aa20.8■□□□□ 0.92
HLA-DPA1-242ENST00000419277 PLEKHH2Q8IVE3 1493 aa20.79■□□□□ 0.92
HLA-DPA1-242ENST00000419277 MYO5CQ9NQX4 1742 aa20.79■□□□□ 0.92
HLA-DPA1-242ENST00000419277 CDC42BPBQ9Y5S2 1711 aa20.79■□□□□ 0.92
HLA-DPA1-242ENST00000419277 KDM5DQ9BY66 1539 aa20.78■□□□□ 0.92
HLA-DPA1-242ENST00000419277 KDM5BQ9UGL1 1544 aa20.78■□□□□ 0.92
HLA-DPA1-242ENST00000419277 MAST1Q9Y2H9 1570 aa20.77■□□□□ 0.92
HLA-DPA1-242ENST00000419277 RPRD2Q5VT52 1461 aaKnown RBP20.76■□□□□ 0.91
HLA-DPA1-242ENST00000419277 MIER1Q8N108 512 aa20.76■□□□□ 0.91
HLA-DPA1-242ENST00000419277 MPHOSPH9Q99550 1183 aa20.76■□□□□ 0.91
HLA-DPA1-242ENST00000419277 C9orf84Q5VXU9 1444 aa20.76■□□□□ 0.91
HLA-DPA1-242ENST00000419277 CCDC141Q6ZP82 1450 aa20.76■□□□□ 0.91
HLA-DPA1-242ENST00000419277 TRIM52Q96A61 297 aa20.75■□□□□ 0.91
HLA-DPA1-242ENST00000419277 ZNF644Q9H582 1327 aaPredicted RBP20.75■□□□□ 0.91
HLA-DPA1-242ENST00000419277 SAMD9LQ8IVG5 1584 aa20.73■□□□□ 0.91
HLA-DPA1-242ENST00000419277 ANKRD50Q9ULJ7 1429 aa20.73■□□□□ 0.91
HLA-DPA1-242ENST00000419277 ARAP3Q8WWN8 1544 aa20.72■□□□□ 0.91
HLA-DPA1-242ENST00000419277 ANKRD30BQ9BXX2 1392 aa20.72■□□□□ 0.91
HLA-DPA1-242ENST00000419277 ZCCHC11Q5TAX3 1644 aaKnown RBP20.71■□□□□ 0.91
HLA-DPA1-242ENST00000419277 PZPP20742 1482 aa20.71■□□□□ 0.91
HLA-DPA1-242ENST00000419277 MBD5Q9P267 1494 aa20.71■□□□□ 0.91
HLA-DPA1-242ENST00000419277 KIAA1107Q9UPP5 1409 aa20.71■□□□□ 0.91
HLA-DPA1-242ENST00000419277 TTC37Q6PGP7 1564 aa20.7■□□□□ 0.9
HLA-DPA1-242ENST00000419277 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.7■□□□□ 0.9
HLA-DPA1-242ENST00000419277 PLXNC1O60486 1568 aa20.7■□□□□ 0.9
HLA-DPA1-242ENST00000419277 ERCC6L2Q5T890 1561 aa20.68■□□□□ 0.9
HLA-DPA1-242ENST00000419277 TSPY4P0CV99 314 aa20.67■□□□□ 0.9
HLA-DPA1-242ENST00000419277 TSPY10P0CW01 314 aa20.67■□□□□ 0.9
HLA-DPA1-242ENST00000419277 TEX14Q8IWB6 1497 aa20.66■□□□□ 0.9
HLA-DPA1-242ENST00000419277 ARHGAP5Q13017 1502 aa20.66■□□□□ 0.9
HLA-DPA1-242ENST00000419277 SLC4A1APQ9BWU0 796 aaKnown RBP20.64■□□□□ 0.89
HLA-DPA1-242ENST00000419277 ZNF777Q9ULD5 760 aaPredicted RBP20.64■□□□□ 0.89
HLA-DPA1-242ENST00000419277 KIF15Q9NS87 1388 aa20.62■□□□□ 0.89
HLA-DPA1-242ENST00000419277 SYCP2Q9BX26 1530 aa20.61■□□□□ 0.89
HLA-DPA1-242ENST00000419277 UNC13BO14795 1591 aa20.61■□□□□ 0.89
HLA-DPA1-242ENST00000419277 POLR1AO95602 1720 aaPredicted RBP20.59■□□□□ 0.89
HLA-DPA1-242ENST00000419277 ARHGEF12Q9NZN5 1544 aa20.59■□□□□ 0.89
HLA-DPA1-242ENST00000419277 PLCH2O75038 1416 aa20.59■□□□□ 0.89
HLA-DPA1-242ENST00000419277 ABCC1P33527 1531 aa20.56■□□□□ 0.88
HLA-DPA1-242ENST00000419277 SCAF1Q9H7N4 1312 aaKnown RBP20.55■□□□□ 0.88
HLA-DPA1-242ENST00000419277 DUOX2Q9NRD8 1548 aa20.55■□□□□ 0.88
HLA-DPA1-242ENST00000419277 ERBINQ96RT1 1412 aa20.53■□□□□ 0.88
HLA-DPA1-242ENST00000419277 IQGAP3Q86VI3 1631 aa20.52■□□□□ 0.88
HLA-DPA1-242ENST00000419277 MAGI2Q86UL8 1455 aa20.51■□□□□ 0.87
HLA-DPA1-242ENST00000419277 WDR7Q9Y4E6 1490 aa20.51■□□□□ 0.87
HLA-DPA1-242ENST00000419277 NUP155O75694 1391 aa20.51■□□□□ 0.87
HLA-DPA1-242ENST00000419277 FAM135AQ9P2D6 1515 aa20.5■□□□□ 0.87
HLA-DPA1-242ENST00000419277 L3MBTL2Q969R5 705 aa20.5■□□□□ 0.87
HLA-DPA1-242ENST00000419277 ABCA9Q8IUA7 1624 aa20.5■□□□□ 0.87
HLA-DPA1-242ENST00000419277 EIF4G2P78344 907 aaKnown RBP eCLIP20.5■□□□□ 0.87
HLA-DPA1-242ENST00000419277 CCER2I3L3R5 266 aa20.48■□□□□ 0.87
HLA-DPA1-242ENST00000419277 RTEL1-TNFRSF6BF6WH68 1400 aa20.47■□□□□ 0.87
HLA-DPA1-242ENST00000419277 UHRF1BP1Q6BDS2 1440 aa20.47■□□□□ 0.87
HLA-DPA1-242ENST00000419277 EFCAB2Q5VUJ9 269 aa20.47■□□□□ 0.87
HLA-DPA1-242ENST00000419277 HNRNPMP52272 730 aaKnown RBP eCLIP20.47■□□□□ 0.87
HLA-DPA1-242ENST00000419277 PKD2Q13563 968 aa20.45■□□□□ 0.86
HLA-DPA1-242ENST00000419277 DDX10Q13206 875 aaKnown RBP20.44■□□□□ 0.86
HLA-DPA1-242ENST00000419277 YTHDC1Q96MU7 727 aaKnown RBP20.44■□□□□ 0.86
HLA-DPA1-242ENST00000419277 ANP32CO43423 234 aa20.43■□□□□ 0.86
HLA-DPA1-242ENST00000419277 ATP10AO60312 1499 aa20.42■□□□□ 0.86
HLA-DPA1-242ENST00000419277 CFAP74Q9C0B2 1584 aa20.41■□□□□ 0.86
HLA-DPA1-242ENST00000419277 SPATA31E1Q6ZUB1 1445 aa20.41■□□□□ 0.86
HLA-DPA1-242ENST00000419277 RALGAPBQ86X10 1494 aa20.41■□□□□ 0.86
HLA-DPA1-242ENST00000419277 FOXD1Q16676 465 aa20.4■□□□□ 0.86
HLA-DPA1-242ENST00000419277 ZFYVE16Q7Z3T8 1539 aa20.39■□□□□ 0.86
HLA-DPA1-242ENST00000419277 HSPA5P11021 654 aaKnown RBP20.38■□□□□ 0.85
HLA-DPA1-242ENST00000419277 INO80Q9ULG1 1556 aaPredicted RBP20.37■□□□□ 0.85
HLA-DPA1-242ENST00000419277 EIF2AK4Q9P2K8 1649 aaKnown RBP20.37■□□□□ 0.85
HLA-DPA1-242ENST00000419277 GTF3C3Q9Y5Q9 886 aa20.37■□□□□ 0.85
HLA-DPA1-242ENST00000419277 ARID4BQ4LE39 1312 aaPredicted RBP20.37■□□□□ 0.85
HLA-DPA1-242ENST00000419277 DEPDC5O75140 1603 aa20.37■□□□□ 0.85
HLA-DPA1-242ENST00000419277 CNTLNQ9NXG0 1405 aa20.36■□□□□ 0.85
HLA-DPA1-242ENST00000419277 KDM5CP41229 1560 aa20.34■□□□□ 0.85
HLA-DPA1-242ENST00000419277 CCDC144AA2RUR9 1427 aa20.34■□□□□ 0.85
HLA-DPA1-242ENST00000419277 FANCAO15360 1455 aa20.34■□□□□ 0.85
HLA-DPA1-242ENST00000419277 LAMC1P11047 1609 aa20.33■□□□□ 0.84
HLA-DPA1-242ENST00000419277 WASHC2AQ641Q2 1341 aa20.31■□□□□ 0.84
HLA-DPA1-242ENST00000419277 OSCARQ8IYS5 282 aa20.31■□□□□ 0.84
HLA-DPA1-242ENST00000419277 KCNH8Q96L42 1107 aa20.31■□□□□ 0.84
HLA-DPA1-242ENST00000419277 CCDC7Q96M83 1385 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms