RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 GSE1Q14687 1217 aa15.49■□□□□ 0.07
DDR1-232ENST00000418800 CCDC18Q5T9S5 1454 aa15.49■□□□□ 0.07
DDR1-232ENST00000418800 UBE2Q2Q8WVN8 375 aa15.49■□□□□ 0.07
DDR1-232ENST00000418800 FHAD1B1AJZ9 1412 aa15.47■□□□□ 0.07
DDR1-232ENST00000418800 FRAT1Q92837 279 aaPredicted RBP15.46■□□□□ 0.07
DDR1-232ENST00000418800 NBPF8Q3BBV2 869 aa15.46■□□□□ 0.07
DDR1-232ENST00000418800 KIF7Q2M1P5 1343 aa15.46■□□□□ 0.06
DDR1-232ENST00000418800 VSIG10Q8N0Z9 540 aa15.45■□□□□ 0.06
DDR1-232ENST00000418800 NAP1L5Q96NT1 182 aaPredicted RBP15.45■□□□□ 0.06
DDR1-232ENST00000418800 RGL3Q3MIN7 710 aa15.44■□□□□ 0.06
DDR1-232ENST00000418800 CC2D1BQ5T0F9 858 aaKnown RBP15.44■□□□□ 0.06
DDR1-232ENST00000418800 AQRO60306 1485 aaKnown RBP eCLIP15.44■□□□□ 0.061e-7■■■■■ 41.3
DDR1-232ENST00000418800 GLIPR1L2Q4G1C9 344 aa15.43■□□□□ 0.06
DDR1-232ENST00000418800 CARD11Q9BXL7 1154 aa15.43■□□□□ 0.06
DDR1-232ENST00000418800 RCAN3Q9UKA8 241 aa15.43■□□□□ 0.06
DDR1-232ENST00000418800 CCDC7Q96M83 1385 aa15.43■□□□□ 0.06
DDR1-232ENST00000418800 NFKBIBQ15653 356 aa15.42■□□□□ 0.06
DDR1-232ENST00000418800 POLA1P09884 1462 aaPredicted RBP15.42■□□□□ 0.06
DDR1-232ENST00000418800 PKNOX2Q96KN3 472 aa15.41■□□□□ 0.06
DDR1-232ENST00000418800 MRC2Q9UBG0 1479 aa15.4■□□□□ 0.06
DDR1-232ENST00000418800 CHMP7Q8WUX9 453 aaPredicted RBP15.39■□□□□ 0.05
DDR1-232ENST00000418800 DDRGK1Q96HY6 314 aa15.39■□□□□ 0.05
DDR1-232ENST00000418800 USP35Q9P2H5 1018 aa15.39■□□□□ 0.05
DDR1-232ENST00000418800 CDCA7LQ96GN5 454 aa15.39■□□□□ 0.05
DDR1-232ENST00000418800 FMN1Q68DA7 1419 aa15.38■□□□□ 0.05
DDR1-232ENST00000418800 CNTLNQ9NXG0 1405 aa15.38■□□□□ 0.05
DDR1-232ENST00000418800 ERCC6Q03468 1493 aa15.38■□□□□ 0.05
DDR1-232ENST00000418800 TCERG1O14776 1098 aaKnown RBP15.37■□□□□ 0.05
DDR1-232ENST00000418800 SENP3Q9H4L4 574 aaPredicted RBP15.37■□□□□ 0.05
DDR1-232ENST00000418800 ERICH3Q5RHP9 1530 aa15.37■□□□□ 0.05
DDR1-232ENST00000418800 TIAM1Q13009 1591 aa15.36■□□□□ 0.05
DDR1-232ENST00000418800 FGD6Q6ZV73 1430 aa15.36■□□□□ 0.05
DDR1-232ENST00000418800 UACAQ9BZF9 1416 aa15.36■□□□□ 0.05
DDR1-232ENST00000418800 THOC2Q8NI27 1593 aaKnown RBP15.35■□□□□ 0.05
DDR1-232ENST00000418800 FRAT2O75474 233 aaPredicted RBP15.35■□□□□ 0.05
DDR1-232ENST00000418800 RRP1P56182 461 aaKnown RBP15.35■□□□□ 0.05
DDR1-232ENST00000418800 SLKQ9H2G2 1235 aaPredicted RBP15.35■□□□□ 0.05
DDR1-232ENST00000418800 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.34■□□□□ 0.05
DDR1-232ENST00000418800 WDR62O43379 1518 aa15.34■□□□□ 0.05
DDR1-232ENST00000418800 SPRYD3Q8NCJ5 442 aa15.34■□□□□ 0.05
DDR1-232ENST00000418800 DCAF11Q8TEB1 546 aa15.33■□□□□ 0.04
DDR1-232ENST00000418800 GZF1Q9H116 711 aaPredicted RBP15.33■□□□□ 0.04
DDR1-232ENST00000418800 ZNF644Q9H582 1327 aaPredicted RBP15.33■□□□□ 0.04
DDR1-232ENST00000418800 CANXP27824 592 aaKnown RBP15.33■□□□□ 0.04
DDR1-232ENST00000418800 PKD2Q13563 968 aa15.32■□□□□ 0.04
DDR1-232ENST00000418800 CRBNQ96SW2 442 aa15.32■□□□□ 0.04
DDR1-232ENST00000418800 PTPRKQ15262 1439 aa15.32■□□□□ 0.04
DDR1-232ENST00000418800 ST20-MTHFSA0A0A6YYL1 179 aa15.32■□□□□ 0.04
DDR1-232ENST00000418800 ABCA10Q8WWZ4 1543 aa15.31■□□□□ 0.04
DDR1-232ENST00000418800 BACH2Q9BYV9 841 aa15.3■□□□□ 0.04
DDR1-232ENST00000418800 RSPH6AQ9H0K4 717 aa15.3■□□□□ 0.04
DDR1-232ENST00000418800 TARBP1Q13395 1621 aaKnown RBP15.29■□□□□ 0.04
DDR1-232ENST00000418800 PNISRQ8TF01 805 aaKnown RBP15.28■□□□□ 0.04
DDR1-232ENST00000418800 NAIPQ13075 1403 aa15.26■□□□□ 0.03
DDR1-232ENST00000418800 NEUROD2Q15784 382 aa15.24■□□□□ 0.03
DDR1-232ENST00000418800 CFDP1Q9UEE9 299 aaPredicted RBP15.24■□□□□ 0.03
DDR1-232ENST00000418800 ARID3AQ99856 593 aa15.24■□□□□ 0.03
DDR1-232ENST00000418800 WDR43Q15061 677 aaKnown RBP eCLIP15.24■□□□□ 0.03
DDR1-232ENST00000418800 USP47Q96K76 1375 aa15.24■□□□□ 0.03
DDR1-232ENST00000418800 PNNQ9H307 717 aaKnown RBP15.23■□□□□ 0.03
DDR1-232ENST00000418800 ABCA5Q8WWZ7 1642 aa15.23■□□□□ 0.03
DDR1-232ENST00000418800 HFM1A2PYH4 1435 aa15.22■□□□□ 0.03
DDR1-232ENST00000418800 HSP90AA2PQ14568 343 aaPredicted RBP15.22■□□□□ 0.03
DDR1-232ENST00000418800 C20orf194Q5TEA3 1177 aa15.21■□□□□ 0.03
DDR1-232ENST00000418800 ZNF608Q9ULD9 1512 aaPredicted RBP15.21■□□□□ 0.02
DDR1-232ENST00000418800 SMG6Q86US8 1419 aaKnown RBP15.21■□□□□ 0.02
DDR1-232ENST00000418800 PCF11O94913 1555 aaKnown RBP15.19■□□□□ 0.02
DDR1-232ENST00000418800 HSP90AA1P07900 732 aaKnown RBP15.19■□□□□ 0.02
DDR1-232ENST00000418800 NCOA2Q15596 1464 aa15.19■□□□□ 0.02
DDR1-232ENST00000418800 ZMYND15Q9H091 742 aa15.19■□□□□ 0.02
DDR1-232ENST00000418800 POGKQ9P215 609 aa15.19■□□□□ 0.02
DDR1-232ENST00000418800 CCDC146Q8IYE0 955 aa15.18■□□□□ 0.02
DDR1-232ENST00000418800 MYOM3Q5VTT5 1437 aa15.18■□□□□ 0.02
DDR1-232ENST00000418800 WASHC2CQ9Y4E1 1318 aa15.18■□□□□ 0.02
DDR1-232ENST00000418800 GAPVD1Q14C86 1478 aa15.18■□□□□ 0.02
DDR1-232ENST00000418800 IFT140Q96RY7 1462 aa15.17■□□□□ 0.02
DDR1-232ENST00000418800 MYBBP1AQ9BQG0 1328 aaKnown RBP15.15■□□□□ 0.02
DDR1-232ENST00000418800 NLRP13Q86W25 1043 aa15.15■□□□□ 0.02
DDR1-232ENST00000418800 NCOA1Q15788 1441 aa15.14■□□□□ 0.01
DDR1-232ENST00000418800 CASKIN1Q8WXD9 1431 aa15.14■□□□□ 0.01
DDR1-232ENST00000418800 TNNT2P45379 298 aaPredicted RBP15.14■□□□□ 0.01
DDR1-232ENST00000418800 MS4A1P11836 297 aa15.14■□□□□ 0.01
DDR1-232ENST00000418800 TSPY4P0CV99 314 aa15.13■□□□□ 0.01
DDR1-232ENST00000418800 TSPY10P0CW01 314 aa15.13■□□□□ 0.01
DDR1-232ENST00000418800 FAM43AQ8N2R8 423 aa15.13■□□□□ 0.01
DDR1-232ENST00000418800 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.13■□□□□ 0.01
DDR1-232ENST00000418800 PBRM1Q86U86 1689 aa15.13■□□□□ 0.01
DDR1-232ENST00000418800 RALBP1Q15311 655 aa15.12■□□□□ 0.01
DDR1-232ENST00000418800 EIF4G3O43432 1585 aaKnown RBP15.11■□□□□ 0.01
DDR1-232ENST00000418800 PANK3Q9H999 370 aa15.11■□□□□ 0.01
DDR1-232ENST00000418800 KTN1Q86UP2 1357 aaKnown RBP15.11■□□□□ 0.01
DDR1-232ENST00000418800 CUL7Q14999 1698 aa15.1■□□□□ 0.01
DDR1-232ENST00000418800 NUP155O75694 1391 aa15.1■□□□□ 0.01
DDR1-232ENST00000418800 KIF15Q9NS87 1388 aa15.1■□□□□ 0.01
DDR1-232ENST00000418800 FAM161AQ3B820 660 aa15.09■□□□□ 0.01
DDR1-232ENST00000418800 TRIM44Q96DX7 344 aaPredicted RBP15.09■□□□□ 0.01
DDR1-232ENST00000418800 UPF2Q9HAU5 1272 aaKnown RBP15.09■□□□□ 0.01
DDR1-232ENST00000418800 A0A0U1RQG5 324 aaPredicted RBP15.09■□□□□ 0.01
DDR1-232ENST00000418800 BECN1Q14457 450 aa15.09■□□□□ 0.01
DDR1-232ENST00000418800 KNSTRNQ9Y448 316 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms