RNA–Protein interactions for RNA: ENST00000418653.5

SNAP47-204, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SNAP47, Length 1,867 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-204ENST00000418653 C9orf84Q5VXU9 1444 aa19.64■□□□□ 0.73
SNAP47-204ENST00000418653 PLPPR3Q6T4P5 718 aa19.64■□□□□ 0.73
SNAP47-204ENST00000418653 PRXQ9BXM0 1461 aa19.64■□□□□ 0.73
SNAP47-204ENST00000418653 NUP153P49790 1475 aaKnown RBP19.62■□□□□ 0.73
SNAP47-204ENST00000418653 ATP10AO60312 1499 aa19.61■□□□□ 0.73
SNAP47-204ENST00000418653 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.61■□□□□ 0.73
SNAP47-204ENST00000418653 ARID3CA6NKF2 412 aa19.6■□□□□ 0.73
SNAP47-204ENST00000418653 MLECQ14165 292 aa19.56■□□□□ 0.72
SNAP47-204ENST00000418653 REREQ9P2R6 1566 aa19.55■□□□□ 0.72
SNAP47-204ENST00000418653 NCOA1Q15788 1441 aa19.53■□□□□ 0.72
SNAP47-204ENST00000418653 C3P01024 1663 aa19.52■□□□□ 0.72
SNAP47-204ENST00000418653 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.52■□□□□ 0.71
SNAP47-204ENST00000418653 HNRNPUL2Q1KMD3 747 aaKnown RBP19.52■□□□□ 0.71
SNAP47-204ENST00000418653 PLEKHD1A6NEE1 506 aa19.51■□□□□ 0.71
SNAP47-204ENST00000418653 SCAPERQ9BY12 1400 aa19.51■□□□□ 0.71
SNAP47-204ENST00000418653 KDM5CP41229 1560 aa19.48■□□□□ 0.71
SNAP47-204ENST00000418653 MED1Q15648 1581 aaPredicted RBP19.48■□□□□ 0.71
SNAP47-204ENST00000418653 PLCH2O75038 1416 aa19.48■□□□□ 0.71
SNAP47-204ENST00000418653 CEBPAP49715 358 aaPredicted RBP19.48■□□□□ 0.71
SNAP47-204ENST00000418653 AGLP35573 1532 aa19.46■□□□□ 0.71
SNAP47-204ENST00000418653 TRAPPC8Q9Y2L5 1435 aa19.46■□□□□ 0.71
SNAP47-204ENST00000418653 P3H3Q8IVL6 736 aa19.45■□□□□ 0.7
SNAP47-204ENST00000418653 ZNF518AQ6AHZ1 1483 aa19.45■□□□□ 0.7
SNAP47-204ENST00000418653 MYO5CQ9NQX4 1742 aa19.44■□□□□ 0.7
SNAP47-204ENST00000418653 DIP2CQ9Y2E4 1556 aa19.43■□□□□ 0.7
SNAP47-204ENST00000418653 CNTLNQ9NXG0 1405 aa19.41■□□□□ 0.7
SNAP47-204ENST00000418653 CAMSAP1Q5T5Y3 1602 aa19.39■□□□□ 0.7
SNAP47-204ENST00000418653 NPATQ14207 1427 aa19.39■□□□□ 0.69
SNAP47-204ENST00000418653 MROH2AA6NES4 1674 aa19.39■□□□□ 0.69
SNAP47-204ENST00000418653 UBAP1LF5GYI3 381 aa19.39■□□□□ 0.69
SNAP47-204ENST00000418653 PLA2R1Q13018 1463 aa19.37■□□□□ 0.69
SNAP47-204ENST00000418653 ZNF142P52746 1687 aaPredicted RBP19.37■□□□□ 0.69
SNAP47-204ENST00000418653 ABCA6Q8N139 1617 aa19.35■□□□□ 0.69
SNAP47-204ENST00000418653 EFCAB2Q5VUJ9 269 aa19.35■□□□□ 0.69
SNAP47-204ENST00000418653 MLH3Q9UHC1 1453 aa19.34■□□□□ 0.69
SNAP47-204ENST00000418653 TCOF1Q13428 1488 aaKnown RBP19.3■□□□□ 0.68
SNAP47-204ENST00000418653 ESF1Q9H501 851 aaKnown RBP19.3■□□□□ 0.68
SNAP47-204ENST00000418653 PKD2Q13563 968 aa19.29■□□□□ 0.68
SNAP47-204ENST00000418653 ZNF335Q9H4Z2 1342 aaPredicted RBP19.29■□□□□ 0.68
SNAP47-204ENST00000418653 CDK13Q14004 1512 aaKnown RBP19.28■□□□□ 0.68
SNAP47-204ENST00000418653 KIF14Q15058 1648 aa19.27■□□□□ 0.68
SNAP47-204ENST00000418653 MYO3AQ8NEV4 1616 aa19.27■□□□□ 0.68
SNAP47-204ENST00000418653 SUPT6HQ7KZ85 1726 aaKnown RBP19.27■□□□□ 0.67
SNAP47-204ENST00000418653 CPS1P31327 1500 aa19.26■□□□□ 0.67
SNAP47-204ENST00000418653 ARHGAP5Q13017 1502 aa19.24■□□□□ 0.67
SNAP47-204ENST00000418653 CEP170BQ9Y4F5 1589 aaPredicted RBP19.23■□□□□ 0.67
SNAP47-204ENST00000418653 HSPA1LP34931 641 aa19.22■□□□□ 0.67
SNAP47-204ENST00000418653 ITSN2Q9NZM3 1697 aa19.21■□□□□ 0.67
SNAP47-204ENST00000418653 ABCC1P33527 1531 aa19.2■□□□□ 0.66
SNAP47-204ENST00000418653 AFAP1Q8N556 730 aa19.2■□□□□ 0.66
SNAP47-204ENST00000418653 PHF23Q9BUL5 403 aaPredicted RBP19.2■□□□□ 0.66
SNAP47-204ENST00000418653 KIDINS220Q9ULH0 1771 aa19.2■□□□□ 0.66
SNAP47-204ENST00000418653 NCKAP5LQ9HCH0 1330 aa19.19■□□□□ 0.66
SNAP47-204ENST00000418653 TOM1O60784 492 aa19.18■□□□□ 0.66
SNAP47-204ENST00000418653 CDC42BPBQ9Y5S2 1711 aa19.17■□□□□ 0.66
SNAP47-204ENST00000418653 PREX2Q70Z35 1606 aa19.16■□□□□ 0.66
SNAP47-204ENST00000418653 PPP6R1Q9UPN7 881 aa19.16■□□□□ 0.66
SNAP47-204ENST00000418653 TROQ12816 1431 aaPredicted RBP19.16■□□□□ 0.66
SNAP47-204ENST00000418653 CDK11AQ9UQ88 783 aaPredicted RBP19.16■□□□□ 0.66
SNAP47-204ENST00000418653 POLR1AO95602 1720 aaPredicted RBP19.15■□□□□ 0.66
SNAP47-204ENST00000418653 PTPRKQ15262 1439 aa19.15■□□□□ 0.66
SNAP47-204ENST00000418653 ZMYM3Q14202 1370 aa19.15■□□□□ 0.66
SNAP47-204ENST00000418653 MYT1LQ9UL68 1186 aa19.14■□□□□ 0.65
SNAP47-204ENST00000418653 CLIP1P30622 1438 aa19.14■□□□□ 0.65
SNAP47-204ENST00000418653 CSRNP3Q8WYN3 585 aa19.14■□□□□ 0.65
SNAP47-204ENST00000418653 CLTCQ00610 1675 aaKnown RBP19.12■□□□□ 0.65
SNAP47-204ENST00000418653 FMN1Q68DA7 1419 aa19.11■□□□□ 0.65
SNAP47-204ENST00000418653 EEA1Q15075 1411 aa19.1■□□□□ 0.65
SNAP47-204ENST00000418653 SHANK2Q9UPX8 1470 aa19.1■□□□□ 0.65
SNAP47-204ENST00000418653 SCAF1Q9H7N4 1312 aaKnown RBP19.1■□□□□ 0.65
SNAP47-204ENST00000418653 A2ML1A8K2U0 1454 aa19.1■□□□□ 0.65
SNAP47-204ENST00000418653 PLXNC1O60486 1568 aa19.09■□□□□ 0.65
SNAP47-204ENST00000418653 ALKQ9UM73 1620 aa19.09■□□□□ 0.65
SNAP47-204ENST00000418653 NEURL4Q96JN8 1562 aa19.08■□□□□ 0.64
SNAP47-204ENST00000418653 DNMT1P26358 1616 aaKnown RBP19.08■□□□□ 0.64
SNAP47-204ENST00000418653 PIP4K2BP78356 416 aa19.07■□□□□ 0.64
SNAP47-204ENST00000418653 SAMD9LQ8IVG5 1584 aa19.06■□□□□ 0.64
SNAP47-204ENST00000418653 VWDEQ8N2E2 1590 aa19.04■□□□□ 0.64
SNAP47-204ENST00000418653 RNF17Q9BXT8 1623 aaKnown RBP19.03■□□□□ 0.64
SNAP47-204ENST00000418653 SYNMO15061 1565 aa19.02■□□□□ 0.64
SNAP47-204ENST00000418653 INO80Q9ULG1 1556 aaPredicted RBP19■□□□□ 0.63
SNAP47-204ENST00000418653 CDC42BPAQ5VT25 1732 aa19■□□□□ 0.63
SNAP47-204ENST00000418653 DEPDC5O75140 1603 aa18.99■□□□□ 0.63
SNAP47-204ENST00000418653 RANGAP1P46060 587 aaPredicted RBP18.99■□□□□ 0.63
SNAP47-204ENST00000418653 LRRIQ1Q96JM4 1722 aa18.98■□□□□ 0.63
SNAP47-204ENST00000418653 ATP7AQ04656 1500 aa18.98■□□□□ 0.63
SNAP47-204ENST00000418653 FAM135AQ9P2D6 1515 aa18.98■□□□□ 0.63
SNAP47-204ENST00000418653 MED14O60244 1454 aa18.97■□□□□ 0.63
SNAP47-204ENST00000418653 A2MP01023 1474 aa18.96■□□□□ 0.63
SNAP47-204ENST00000418653 ADGBQ8N7X0 1667 aa18.95■□□□□ 0.62
SNAP47-204ENST00000418653 CCDC18Q5T9S5 1454 aa18.93■□□□□ 0.62
SNAP47-204ENST00000418653 SYCP2Q9BX26 1530 aa18.93■□□□□ 0.62
SNAP47-204ENST00000418653 RGS17Q9UGC6 210 aaPredicted RBP18.92■□□□□ 0.62
SNAP47-204ENST00000418653 SPAG9O60271 1321 aaKnown RBP18.92■□□□□ 0.62
SNAP47-204ENST00000418653 CHIC1Q5VXU3 224 aa18.91■□□□□ 0.62
SNAP47-204ENST00000418653 PLEKHH2Q8IVE3 1493 aa18.91■□□□□ 0.62
SNAP47-204ENST00000418653 KIAA1107Q9UPP5 1409 aa18.9■□□□□ 0.62
SNAP47-204ENST00000418653 IQGAP1P46940 1657 aa18.9■□□□□ 0.62
SNAP47-204ENST00000418653 ARHGAP35Q9NRY4 1499 aa18.9■□□□□ 0.62
SNAP47-204ENST00000418653 LRRC7Q96NW7 1537 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms