RNA–Protein interactions for RNA: ENST00000418224.7

PMS1-206, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-206ENST00000418224 MRS2Q9HD23 443 aa23.63■■□□□ 1.37
PMS1-206ENST00000418224 MPHOSPH9Q99550 1183 aa23.63■■□□□ 1.37
PMS1-206ENST00000418224 SAMD9Q5K651 1589 aa23.61■■□□□ 1.37
PMS1-206ENST00000418224 C11orf95C9JLR9 678 aaPredicted RBP23.61■■□□□ 1.37
PMS1-206ENST00000418224 CNTLNQ9NXG0 1405 aa23.6■■□□□ 1.37
PMS1-206ENST00000418224 CNGB1Q14028 1251 aaPredicted RBP23.6■■□□□ 1.37
PMS1-206ENST00000418224 GAPVD1Q14C86 1478 aa23.6■■□□□ 1.37
PMS1-206ENST00000418224 UGGT2Q9NYU1 1516 aa23.59■■□□□ 1.37
PMS1-206ENST00000418224 PRKRIP1Q9H875 184 aaPredicted RBP23.58■■□□□ 1.37
PMS1-206ENST00000418224 MAGI3Q5TCQ9 1506 aa23.58■■□□□ 1.36
PMS1-206ENST00000418224 SENP3-EIF4A1A0A087X0R7 540 aa23.57■■□□□ 1.36
PMS1-206ENST00000418224 URB2Q14146 1524 aaKnown RBP23.57■■□□□ 1.36
PMS1-206ENST00000418224 BRPF3Q9ULD4 1205 aa23.57■■□□□ 1.36
PMS1-206ENST00000418224 DENND4BO75064 1496 aaPredicted RBP23.56■■□□□ 1.36
PMS1-206ENST00000418224 ZBED9Q6R2W3 1325 aa23.56■■□□□ 1.36
PMS1-206ENST00000418224 CCDC7Q96M83 1385 aa23.54■■□□□ 1.36
PMS1-206ENST00000418224 KDM6BO15054 1643 aa23.54■■□□□ 1.36
PMS1-206ENST00000418224 THOC2Q8NI27 1593 aaKnown RBP23.53■■□□□ 1.36
PMS1-206ENST00000418224 AKNAQ7Z591 1439 aa23.52■■□□□ 1.36
PMS1-206ENST00000418224 NBPF8Q3BBV2 869 aa23.5■■□□□ 1.35
PMS1-206ENST00000418224 HECW1Q76N89 1606 aa23.5■■□□□ 1.35
PMS1-206ENST00000418224 POLR3GLQ9BT43 218 aa23.5■■□□□ 1.35
PMS1-206ENST00000418224 ABCA5Q8WWZ7 1642 aa23.48■■□□□ 1.35
PMS1-206ENST00000418224 ARHGEF11O15085 1522 aa23.48■■□□□ 1.35
PMS1-206ENST00000418224 TCOF1Q13428 1488 aaKnown RBP23.48■■□□□ 1.35
PMS1-206ENST00000418224 NCOA1Q15788 1441 aa23.48■■□□□ 1.35
PMS1-206ENST00000418224 GCC2Q8IWJ2 1684 aa23.48■■□□□ 1.35
PMS1-206ENST00000418224 CDK13Q14004 1512 aaKnown RBP23.46■■□□□ 1.35
PMS1-206ENST00000418224 SLC4A1APQ9BWU0 796 aaKnown RBP23.45■■□□□ 1.34
PMS1-206ENST00000418224 KIF7Q2M1P5 1343 aa23.44■■□□□ 1.34
PMS1-206ENST00000418224 EPRSP07814 1512 aaKnown RBP23.43■■□□□ 1.34
PMS1-206ENST00000418224 USP35Q9P2H5 1018 aa23.43■■□□□ 1.34
PMS1-206ENST00000418224 WASHC2CQ9Y4E1 1318 aa23.42■■□□□ 1.34
PMS1-206ENST00000418224 LAMC3Q9Y6N6 1575 aa23.42■■□□□ 1.34
PMS1-206ENST00000418224 ZNF326Q5BKZ1 582 aaKnown RBP23.41■■□□□ 1.34
PMS1-206ENST00000418224 MIA2Q96PC5 1412 aa23.39■■□□□ 1.33
PMS1-206ENST00000418224 ANKRD30BQ9BXX2 1392 aa23.39■■□□□ 1.33
PMS1-206ENST00000418224 ZNF644Q9H582 1327 aaPredicted RBP23.39■■□□□ 1.33
PMS1-206ENST00000418224 PPM1GO15355 546 aaPredicted RBP23.36■■□□□ 1.33
PMS1-206ENST00000418224 RPRD2Q5VT52 1461 aaKnown RBP23.36■■□□□ 1.33
PMS1-206ENST00000418224 NUDCQ9Y266 331 aa23.35■■□□□ 1.33
PMS1-206ENST00000418224 KIF21AQ7Z4S6 1674 aa23.34■■□□□ 1.33
PMS1-206ENST00000418224 GSE1Q14687 1217 aa23.33■■□□□ 1.33
PMS1-206ENST00000418224 PDS5BQ9NTI5 1447 aa23.33■■□□□ 1.33
PMS1-206ENST00000418224 PDE4AP27815 886 aa23.33■■□□□ 1.33
PMS1-206ENST00000418224 DAPK1P53355 1430 aa23.32■■□□□ 1.32
PMS1-206ENST00000418224 TEX14Q8IWB6 1497 aa23.31■■□□□ 1.32
PMS1-206ENST00000418224 SMG6Q86US8 1419 aaKnown RBP23.3■■□□□ 1.32
PMS1-206ENST00000418224 IQGAP2Q13576 1575 aa23.3■■□□□ 1.32
PMS1-206ENST00000418224 DNAJC5BQ9UF47 199 aa23.28■■□□□ 1.32
PMS1-206ENST00000418224 ABCC5O15440 1437 aa23.28■■□□□ 1.32
PMS1-206ENST00000418224 SPATA31E1Q6ZUB1 1445 aa23.28■■□□□ 1.32
PMS1-206ENST00000418224 ROCK1Q13464 1354 aa23.26■■□□□ 1.31
PMS1-206ENST00000418224 FRAT1Q92837 279 aaPredicted RBP23.26■■□□□ 1.31
PMS1-206ENST00000418224 WDR62O43379 1518 aa23.25■■□□□ 1.31
PMS1-206ENST00000418224 ZNF777Q9ULD5 760 aaPredicted RBP23.25■■□□□ 1.31
PMS1-206ENST00000418224 TCERG1O14776 1098 aaKnown RBP23.24■■□□□ 1.31
PMS1-206ENST00000418224 RNF123Q5XPI4 1314 aa23.24■■□□□ 1.31
PMS1-206ENST00000418224 SLC4A3P48751 1232 aa23.23■■□□□ 1.31
PMS1-206ENST00000418224 EXOC6Q8TAG9 804 aa23.22■■□□□ 1.31
PMS1-206ENST00000418224 BACH2Q9BYV9 841 aa23.22■■□□□ 1.31
PMS1-206ENST00000418224 NFKBIBQ15653 356 aa23.22■■□□□ 1.31
PMS1-206ENST00000418224 USP47Q96K76 1375 aa23.21■■□□□ 1.31
PMS1-206ENST00000418224 TARBP1Q13395 1621 aaKnown RBP23.2■■□□□ 1.3
PMS1-206ENST00000418224 TMC1Q8TDI8 760 aa23.19■■□□□ 1.3
PMS1-206ENST00000418224 PKNOX2Q96KN3 472 aa23.19■■□□□ 1.3
PMS1-206ENST00000418224 DHX29Q7Z478 1369 aaKnown RBP23.18■■□□□ 1.3
PMS1-206ENST00000418224 CFDP1Q9UEE9 299 aaPredicted RBP23.18■■□□□ 1.3
PMS1-206ENST00000418224 PKD2Q13563 968 aa23.17■■□□□ 1.3
PMS1-206ENST00000418224 DNMT1P26358 1616 aaKnown RBP23.17■■□□□ 1.3
PMS1-206ENST00000418224 SKAP1Q86WV1 359 aa23.16■■□□□ 1.3
PMS1-206ENST00000418224 PBRM1Q86U86 1689 aa23.15■■□□□ 1.3
PMS1-206ENST00000418224 RSPH6AQ9H0K4 717 aa23.14■■□□□ 1.29
PMS1-206ENST00000418224 PZPP20742 1482 aa23.13■■□□□ 1.29
PMS1-206ENST00000418224 DAXXQ9UER7 740 aaPredicted RBP23.13■■□□□ 1.29
PMS1-206ENST00000418224 ADAMTS12P58397 1594 aa23.12■■□□□ 1.29
PMS1-206ENST00000418224 POLR1AO95602 1720 aaPredicted RBP23.11■■□□□ 1.29
PMS1-206ENST00000418224 KDM2AQ9Y2K7 1162 aa23.1■■□□□ 1.29
PMS1-206ENST00000418224 NUP153P49790 1475 aaKnown RBP23.1■■□□□ 1.29
PMS1-206ENST00000418224 DDRGK1Q96HY6 314 aa23.1■■□□□ 1.29
PMS1-206ENST00000418224 CARD11Q9BXL7 1154 aa23.1■■□□□ 1.29
PMS1-206ENST00000418224 PNISRQ8TF01 805 aaKnown RBP23.09■■□□□ 1.29
PMS1-206ENST00000418224 PRG4Q92954 1404 aaPredicted RBP23.09■■□□□ 1.29
PMS1-206ENST00000418224 KIAA1107Q9UPP5 1409 aa23.08■■□□□ 1.29
PMS1-206ENST00000418224 BCORL1Q5H9F3 1711 aa23.08■■□□□ 1.29
PMS1-206ENST00000418224 RRP1P56182 461 aaKnown RBP23.08■■□□□ 1.29
PMS1-206ENST00000418224 MS4A1P11836 297 aa23.06■■□□□ 1.28
PMS1-206ENST00000418224 CAMSAP2Q08AD1 1489 aa23.06■■□□□ 1.28
PMS1-206ENST00000418224 DCAF11Q8TEB1 546 aa23.04■■□□□ 1.28
PMS1-206ENST00000418224 MBD5Q9P267 1494 aa23.03■■□□□ 1.28
PMS1-206ENST00000418224 FAM43AQ8N2R8 423 aa23.03■■□□□ 1.28
PMS1-206ENST00000418224 DISP1Q96F81 1524 aa23.03■■□□□ 1.28
PMS1-206ENST00000418224 KIAA0556O60303 1618 aa23.01■■□□□ 1.27
PMS1-206ENST00000418224 ST20-MTHFSA0A0A6YYL1 179 aa23.01■■□□□ 1.27
PMS1-206ENST00000418224 FRAT2O75474 233 aaPredicted RBP23.01■■□□□ 1.27
PMS1-206ENST00000418224 ANKRD30AQ9BXX3 1397 aa23■■□□□ 1.27
PMS1-206ENST00000418224 ARID4BQ4LE39 1312 aaPredicted RBP23■■□□□ 1.27
PMS1-206ENST00000418224 RAPGEF6Q8TEU7 1601 aa23■■□□□ 1.27
PMS1-206ENST00000418224 TROQ12816 1431 aaPredicted RBP23■■□□□ 1.27
PMS1-206ENST00000418224 NUP155O75694 1391 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms