RNA–Protein interactions for RNA: ENST00000411938.1

LSM8-202, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM8, Length 290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-202ENST00000411938 RAPGEF6Q8TEU7 1601 aa11.87□□□□□ -0.51
LSM8-202ENST00000411938 CFAP74Q9C0B2 1584 aa11.86□□□□□ -0.51
LSM8-202ENST00000411938 ARHGEF12Q9NZN5 1544 aa11.86□□□□□ -0.51
LSM8-202ENST00000411938 HECW1Q76N89 1606 aa11.85□□□□□ -0.51
LSM8-202ENST00000411938 ATP10AO60312 1499 aa11.84□□□□□ -0.51
LSM8-202ENST00000411938 NUP153P49790 1475 aaKnown RBP11.84□□□□□ -0.51
LSM8-202ENST00000411938 UBAP1LF5GYI3 381 aa11.84□□□□□ -0.51
LSM8-202ENST00000411938 SETD1BQ9UPS6 1966 aaKnown RBP11.84□□□□□ -0.51
LSM8-202ENST00000411938 SCAPERQ9BY12 1400 aa11.84□□□□□ -0.51
LSM8-202ENST00000411938 IQSEC2Q5JU85 1478 aa11.83□□□□□ -0.52
LSM8-202ENST00000411938 PRXQ9BXM0 1461 aa11.83□□□□□ -0.52
LSM8-202ENST00000411938 LTBP4Q8N2S1 1624 aa11.83□□□□□ -0.52
LSM8-202ENST00000411938 C9orf84Q5VXU9 1444 aa11.83□□□□□ -0.52
LSM8-202ENST00000411938 RANGAP1P46060 587 aaPredicted RBP11.82□□□□□ -0.52
LSM8-202ENST00000411938 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.81□□□□□ -0.52
LSM8-202ENST00000411938 ESF1Q9H501 851 aaKnown RBP11.8□□□□□ -0.52
LSM8-202ENST00000411938 MYT1LQ9UL68 1186 aa11.8□□□□□ -0.52
LSM8-202ENST00000411938 SAMD9Q5K651 1589 aa11.78□□□□□ -0.52
LSM8-202ENST00000411938 EFCAB2Q5VUJ9 269 aa11.77□□□□□ -0.53
LSM8-202ENST00000411938 ZNF335Q9H4Z2 1342 aaPredicted RBP11.76□□□□□ -0.53
LSM8-202ENST00000411938 PLCH2O75038 1416 aa11.76□□□□□ -0.53
LSM8-202ENST00000411938 NCOA1Q15788 1441 aa11.76□□□□□ -0.53
LSM8-202ENST00000411938 SCAF1Q9H7N4 1312 aaKnown RBP11.75□□□□□ -0.53
LSM8-202ENST00000411938 TRAPPC8Q9Y2L5 1435 aa11.75□□□□□ -0.53
LSM8-202ENST00000411938 AFAP1Q8N556 730 aa11.74□□□□□ -0.53
LSM8-202ENST00000411938 NCKAP5LQ9HCH0 1330 aa11.73□□□□□ -0.53
LSM8-202ENST00000411938 HSPA1LP34931 641 aa11.72□□□□□ -0.53
LSM8-202ENST00000411938 PHF23Q9BUL5 403 aaPredicted RBP11.72□□□□□ -0.53
LSM8-202ENST00000411938 C3P01024 1663 aa11.71□□□□□ -0.53
LSM8-202ENST00000411938 ZNF518AQ6AHZ1 1483 aa11.71□□□□□ -0.53
LSM8-202ENST00000411938 PIP4K2BP78356 416 aa11.71□□□□□ -0.53
LSM8-202ENST00000411938 MED1Q15648 1581 aaPredicted RBP11.71□□□□□ -0.54
LSM8-202ENST00000411938 CAMSAP1Q5T5Y3 1602 aa11.7□□□□□ -0.54
LSM8-202ENST00000411938 CSRNP3Q8WYN3 585 aa11.69□□□□□ -0.54
LSM8-202ENST00000411938 ATP1B4Q9UN42 357 aaPredicted RBP11.69□□□□□ -0.54
LSM8-202ENST00000411938 CDK13Q14004 1512 aaKnown RBP11.69□□□□□ -0.54
LSM8-202ENST00000411938 DIP2CQ9Y2E4 1556 aa11.67□□□□□ -0.54
LSM8-202ENST00000411938 PKD2Q13563 968 aa11.67□□□□□ -0.54
LSM8-202ENST00000411938 CNTLNQ9NXG0 1405 aa11.67□□□□□ -0.54
LSM8-202ENST00000411938 TOM1O60784 492 aa11.66□□□□□ -0.54
LSM8-202ENST00000411938 MYO5CQ9NQX4 1742 aa11.66□□□□□ -0.54
LSM8-202ENST00000411938 CDK11AQ9UQ88 783 aaPredicted RBP11.65□□□□□ -0.54
LSM8-202ENST00000411938 NPATQ14207 1427 aa11.65□□□□□ -0.54
LSM8-202ENST00000411938 KDM5CP41229 1560 aa11.65□□□□□ -0.54
LSM8-202ENST00000411938 REREQ9P2R6 1566 aa11.65□□□□□ -0.54
LSM8-202ENST00000411938 AGLP35573 1532 aa11.65□□□□□ -0.55
LSM8-202ENST00000411938 ARHGAP5Q13017 1502 aa11.65□□□□□ -0.55
LSM8-202ENST00000411938 PPP6R1Q9UPN7 881 aa11.64□□□□□ -0.55
LSM8-202ENST00000411938 ZMYM3Q14202 1370 aa11.63□□□□□ -0.55
LSM8-202ENST00000411938 ABCA6Q8N139 1617 aa11.63□□□□□ -0.55
LSM8-202ENST00000411938 MLH3Q9UHC1 1453 aa11.63□□□□□ -0.55
LSM8-202ENST00000411938 PLA2R1Q13018 1463 aa11.6□□□□□ -0.55
LSM8-202ENST00000411938 SENP3Q9H4L4 574 aaPredicted RBP11.6□□□□□ -0.55
LSM8-202ENST00000411938 TCOF1Q13428 1488 aaKnown RBP11.59□□□□□ -0.55
LSM8-202ENST00000411938 KIF14Q15058 1648 aa11.59□□□□□ -0.55
LSM8-202ENST00000411938 CLIP1P30622 1438 aa11.57□□□□□ -0.56
LSM8-202ENST00000411938 TROQ12816 1431 aaPredicted RBP11.57□□□□□ -0.56
LSM8-202ENST00000411938 MROH2AA6NES4 1674 aa11.56□□□□□ -0.56
LSM8-202ENST00000411938 CEP170BQ9Y4F5 1589 aaPredicted RBP11.56□□□□□ -0.56
LSM8-202ENST00000411938 SUPT6HQ7KZ85 1726 aaKnown RBP11.55□□□□□ -0.56
LSM8-202ENST00000411938 MYO3AQ8NEV4 1616 aa11.55□□□□□ -0.56
LSM8-202ENST00000411938 CPS1P31327 1500 aa11.55□□□□□ -0.56
LSM8-202ENST00000411938 PTPRKQ15262 1439 aa11.54□□□□□ -0.56
LSM8-202ENST00000411938 SHANK2Q9UPX8 1470 aa11.54□□□□□ -0.56
LSM8-202ENST00000411938 KIDINS220Q9ULH0 1771 aa11.54□□□□□ -0.56
LSM8-202ENST00000411938 FMN1Q68DA7 1419 aa11.53□□□□□ -0.56
LSM8-202ENST00000411938 ZNF142P52746 1687 aaPredicted RBP11.53□□□□□ -0.56
LSM8-202ENST00000411938 GGT6Q6P531 493 aa11.53□□□□□ -0.56
LSM8-202ENST00000411938 ABCC1P33527 1531 aa11.53□□□□□ -0.56
LSM8-202ENST00000411938 ZNF777Q9ULD5 760 aaPredicted RBP11.52□□□□□ -0.57
LSM8-202ENST00000411938 SPAG9O60271 1321 aaKnown RBP11.52□□□□□ -0.57
LSM8-202ENST00000411938 CLTCQ00610 1675 aaKnown RBP11.51□□□□□ -0.57
LSM8-202ENST00000411938 CDC42BPBQ9Y5S2 1711 aa11.51□□□□□ -0.57
LSM8-202ENST00000411938 A2ML1A8K2U0 1454 aa11.51□□□□□ -0.57
LSM8-202ENST00000411938 ITSN2Q9NZM3 1697 aa11.5□□□□□ -0.57
LSM8-202ENST00000411938 RGS17Q9UGC6 210 aaPredicted RBP11.5□□□□□ -0.57
LSM8-202ENST00000411938 ANKLE2Q86XL3 938 aa11.49□□□□□ -0.57
LSM8-202ENST00000411938 EHMT2Q96KQ7 1210 aa11.49□□□□□ -0.57
LSM8-202ENST00000411938 EEA1Q15075 1411 aa11.49□□□□□ -0.57
LSM8-202ENST00000411938 PREX2Q70Z35 1606 aa11.48□□□□□ -0.57
LSM8-202ENST00000411938 DNMT1P26358 1616 aaKnown RBP11.47□□□□□ -0.57
LSM8-202ENST00000411938 SAMD9LQ8IVG5 1584 aa11.47□□□□□ -0.57
LSM8-202ENST00000411938 UBTFP17480 764 aaKnown RBP11.47□□□□□ -0.57
LSM8-202ENST00000411938 HNRNPMP52272 730 aaKnown RBP eCLIP11.47□□□□□ -0.572e-7■□□□□ 11
LSM8-202ENST00000411938 ALKQ9UM73 1620 aa11.46□□□□□ -0.57
LSM8-202ENST00000411938 A2MP01023 1474 aa11.46□□□□□ -0.57
LSM8-202ENST00000411938 NEURL4Q96JN8 1562 aa11.45□□□□□ -0.58
LSM8-202ENST00000411938 TNRQ92752 1358 aa11.44□□□□□ -0.58
LSM8-202ENST00000411938 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.44□□□□□ -0.58
LSM8-202ENST00000411938 POLR1AO95602 1720 aaPredicted RBP11.44□□□□□ -0.58
LSM8-202ENST00000411938 FBXO31Q5XUX0 539 aaPredicted RBP11.44□□□□□ -0.58
LSM8-202ENST00000411938 POTEAQ6S8J7 498 aa11.44□□□□□ -0.58
LSM8-202ENST00000411938 THEMISQ8N1K5 641 aaPredicted RBP11.44□□□□□ -0.58
LSM8-202ENST00000411938 VWDEQ8N2E2 1590 aa11.44□□□□□ -0.58
LSM8-202ENST00000411938 NPHP4O75161 1426 aaPredicted RBP11.43□□□□□ -0.58
LSM8-202ENST00000411938 ATP7AQ04656 1500 aa11.43□□□□□ -0.58
LSM8-202ENST00000411938 SYCP2Q9BX26 1530 aa11.43□□□□□ -0.58
LSM8-202ENST00000411938 ARHGAP35Q9NRY4 1499 aa11.43□□□□□ -0.58
LSM8-202ENST00000411938 PLXNC1O60486 1568 aa11.41□□□□□ -0.58
LSM8-202ENST00000411938 CDC42BPAQ5VT25 1732 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms