RNA–Protein interactions for RNA: ENST00000411313.1

RNU4-63P-201, Transcript of RNA, U4 small nuclear 63, pseudogene, humanhuman

BASIC

Gene RNU4-63P, Length 118 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-63P-201ENST00000411313 AXIN2Q9Y2T1 843 aa0.14□□□□□ -2.39
RNU4-63P-201ENST00000411313 NOTCH2Q04721 2471 aa0.14□□□□□ -2.39
RNU4-63P-201ENST00000411313 NAV2Q8IVL1 2488 aa0.14□□□□□ -2.39
RNU4-63P-201ENST00000411313 ABCA12Q86UK0 2595 aa0.14□□□□□ -2.39
RNU4-63P-201ENST00000411313 ASH1LQ9NR48 2969 aaKnown RBP0.14□□□□□ -2.39
RNU4-63P-201ENST00000411313 HECTD1Q9ULT8 2610 aa0.14□□□□□ -2.39
RNU4-63P-201ENST00000411313 SYNGAP1Q96PV0 1343 aa0.13□□□□□ -2.39
RNU4-63P-201ENST00000411313 YEATS2Q9ULM3 1422 aa0.13□□□□□ -2.39
RNU4-63P-201ENST00000411313 STAB2Q8WWQ8 2551 aa0.13□□□□□ -2.39
RNU4-63P-201ENST00000411313 CREBBPQ92793 2442 aa0.13□□□□□ -2.39
RNU4-63P-201ENST00000411313 MAST4O15021 2626 aa0.13□□□□□ -2.39
RNU4-63P-201ENST00000411313 PDZD2O15018 2839 aa0.13□□□□□ -2.39
RNU4-63P-201ENST00000411313 KRT37O76014 449 aa0.13□□□□□ -2.39
RNU4-63P-201ENST00000411313 LUC7L3O95232 432 aaKnown RBP0.13□□□□□ -2.39
RNU4-63P-201ENST00000411313 ZIC2O95409 532 aaPredicted RBP0.13□□□□□ -2.39
RNU4-63P-201ENST00000411313 NKX2-3Q8TAU0 364 aa0.13□□□□□ -2.39
RNU4-63P-201ENST00000411313 CAMKK2Q96RR4 588 aa0.13□□□□□ -2.39
RNU4-63P-201ENST00000411313 FBXL17Q9UF56 701 aa0.13□□□□□ -2.39
RNU4-63P-201ENST00000411313 MYO18BQ8IUG5 2567 aa0.13□□□□□ -2.39
RNU4-63P-201ENST00000411313 RYR3Q15413 4870 aa0.13□□□□□ -2.39
RNU4-63P-201ENST00000411313 PIEZO1Q92508 2521 aa0.13□□□□□ -2.39
RNU4-63P-201ENST00000411313 HIVEP3Q5T1R4 2406 aa0.13□□□□□ -2.39
RNU4-63P-201ENST00000411313 SETXQ7Z333 2677 aaKnown RBP0.12□□□□□ -2.39
RNU4-63P-201ENST00000411313 USP9XQ93008 2570 aaPredicted RBP0.12□□□□□ -2.39
RNU4-63P-201ENST00000411313 DOPEY1Q5JWR5 2465 aa0.12□□□□□ -2.39
RNU4-63P-201ENST00000411313 CCDC168Q8NDH2 2452 aa0.12□□□□□ -2.39
RNU4-63P-201ENST00000411313 FASNP49327 2511 aaKnown RBP0.12□□□□□ -2.39
RNU4-63P-201ENST00000411313 SONP18583 2426 aaKnown RBP0.12□□□□□ -2.39
RNU4-63P-201ENST00000411313 OTOGLQ3ZCN5 2332 aa0.12□□□□□ -2.39
RNU4-63P-201ENST00000411313 CYSRT1A8MQ03 144 aa0.12□□□□□ -2.39
RNU4-63P-201ENST00000411313 PPP1R37O75864 691 aa0.12□□□□□ -2.39
RNU4-63P-201ENST00000411313 KCNC3Q14003 757 aa0.12□□□□□ -2.39
RNU4-63P-201ENST00000411313 COL9A3Q14050 684 aaPredicted RBP0.12□□□□□ -2.39
RNU4-63P-201ENST00000411313 SHISA5Q8N114 240 aa0.12□□□□□ -2.39
RNU4-63P-201ENST00000411313 FAM98AQ8NCA5 519 aaKnown RBP0.12□□□□□ -2.39
RNU4-63P-201ENST00000411313 FAM122AQ96E09 287 aa0.12□□□□□ -2.39
RNU4-63P-201ENST00000411313 FAM163AQ96GL9 167 aaPredicted RBP0.12□□□□□ -2.39
RNU4-63P-201ENST00000411313 KRTAP4-9Q9BYQ8 210 aa0.12□□□□□ -2.39
RNU4-63P-201ENST00000411313 KRTAP2-2Q9BYT5 123 aa0.12□□□□□ -2.39
RNU4-63P-201ENST00000411313 KRTAP2-1Q9BYU5 128 aa0.12□□□□□ -2.39
RNU4-63P-201ENST00000411313 U3KPZ7 1027 aaPredicted RBP0.12□□□□□ -2.39
RNU4-63P-201ENST00000411313 ACACBO00763 2458 aa0.12□□□□□ -2.39
RNU4-63P-201ENST00000411313 USH2AO75445 5202 aa0.11□□□□□ -2.39
RNU4-63P-201ENST00000411313 EPG5Q9HCE0 2579 aa0.11□□□□□ -2.39
RNU4-63P-201ENST00000411313 ZANQ9Y493 2812 aa0.11□□□□□ -2.39
RNU4-63P-201ENST00000411313 KRTAP4-8A0A0G2JLE6 195 aa0.11□□□□□ -2.39
RNU4-63P-201ENST00000411313 FBLL1A6NHQ2 334 aaKnown RBP0.11□□□□□ -2.39
RNU4-63P-201ENST00000411313 CCDC85CA6NKD9 419 aa0.11□□□□□ -2.39
RNU4-63P-201ENST00000411313 TGM1P22735 817 aa0.11□□□□□ -2.39
RNU4-63P-201ENST00000411313 PLA2G5P39877 138 aa0.11□□□□□ -2.39
RNU4-63P-201ENST00000411313 RIPPLY3P57055 190 aa0.11□□□□□ -2.39
RNU4-63P-201ENST00000411313 SNRPNP63162 240 aaKnown RBP0.11□□□□□ -2.39
RNU4-63P-201ENST00000411313 MAP3K11Q16584 847 aa0.11□□□□□ -2.39
RNU4-63P-201ENST00000411313 KRTAP21-1Q3LI58 79 aa0.11□□□□□ -2.39
RNU4-63P-201ENST00000411313 LCE2AQ5TA79 106 aaPredicted RBP0.11□□□□□ -2.39
RNU4-63P-201ENST00000411313 HIST2H2BCQ6DN03 193 aa0.11□□□□□ -2.39
RNU4-63P-201ENST00000411313 HIST2H2BDQ6DRA6 164 aa0.11□□□□□ -2.39
RNU4-63P-201ENST00000411313 TMEFF1Q8IYR6 380 aa0.11□□□□□ -2.39
RNU4-63P-201ENST00000411313 CCER1Q8TC90 406 aaPredicted RBP0.11□□□□□ -2.39
RNU4-63P-201ENST00000411313 UPF1Q92900 1129 aaKnown RBP eCLIP0.11□□□□□ -2.39
RNU4-63P-201ENST00000411313 DDX50Q9BQ39 737 aaKnown RBP0.11□□□□□ -2.39
RNU4-63P-201ENST00000411313 KRTAP4-11Q9BYQ6 195 aa0.11□□□□□ -2.39
RNU4-63P-201ENST00000411313 RBM27Q9P2N5 1060 aaKnown RBP0.11□□□□□ -2.39
RNU4-63P-201ENST00000411313 MEGF8Q7Z7M0 2845 aa0.11□□□□□ -2.39
RNU4-63P-201ENST00000411313 TRANK1O15050 2925 aa0.1□□□□□ -2.39
RNU4-63P-201ENST00000411313 CHD8Q9HCK8 2581 aa0.1□□□□□ -2.39
RNU4-63P-201ENST00000411313 RIF1Q5UIP0 2472 aaKnown RBP0.1□□□□□ -2.39
RNU4-63P-201ENST00000411313 ZNF292O60281 2723 aa0.1□□□□□ -2.39
RNU4-63P-201ENST00000411313 ITPR3Q14573 2671 aa0.1□□□□□ -2.39
RNU4-63P-201ENST00000411313 DCAF8L1A6NGE4 600 aa0.1□□□□□ -2.39
RNU4-63P-201ENST00000411313 HOXD11P31277 338 aaPredicted RBP0.1□□□□□ -2.39
RNU4-63P-201ENST00000411313 COL10A1Q03692 680 aa0.1□□□□□ -2.39
RNU4-63P-201ENST00000411313 EML3Q32P44 896 aa0.1□□□□□ -2.39
RNU4-63P-201ENST00000411313 EDAQ92838 391 aa0.1□□□□□ -2.39
RNU4-63P-201ENST00000411313 REPIN1Q9BWE0 567 aaKnown RBP0.1□□□□□ -2.39
RNU4-63P-201ENST00000411313 BIRC6Q9NR09 4857 aa0.1□□□□□ -2.39
RNU4-63P-201ENST00000411313 ANKRD11Q6UB99 2663 aaPredicted RBP0.1□□□□□ -2.39
RNU4-63P-201ENST00000411313 TSPOAP1O95153 1857 aa0.1□□□□□ -2.39
RNU4-63P-201ENST00000411313 MUC12Q9UKN1 5478 aa0.09□□□□□ -2.39
RNU4-63P-201ENST00000411313 CARNS1A5YM72 827 aa0.09□□□□□ -2.4
RNU4-63P-201ENST00000411313 ONECUT2O95948 504 aa0.09□□□□□ -2.4
RNU4-63P-201ENST00000411313 FAM161AQ3B820 660 aa0.09□□□□□ -2.4
RNU4-63P-201ENST00000411313 TNS4Q8IZW8 715 aa0.09□□□□□ -2.4
RNU4-63P-201ENST00000411313 WFDC1Q9HC57 220 aa0.09□□□□□ -2.4
RNU4-63P-201ENST00000411313 STRN4Q9NRL3 753 aa0.09□□□□□ -2.4
RNU4-63P-201ENST00000411313 TNS2Q63HR2 1409 aa0.09□□□□□ -2.4
RNU4-63P-201ENST00000411313 HIVEP1P15822 2718 aa0.08□□□□□ -2.4
RNU4-63P-201ENST00000411313 TENM1Q9UKZ4 2725 aa0.08□□□□□ -2.4
RNU4-63P-201ENST00000411313 COL4A3Q01955 1670 aa0.08□□□□□ -2.4
RNU4-63P-201ENST00000411313 NBEAL2Q6ZNJ1 2754 aa0.08□□□□□ -2.4
RNU4-63P-201ENST00000411313 MAP1BP46821 2468 aaKnown RBP0.08□□□□□ -2.4
RNU4-63P-201ENST00000411313 CACNA1BQ00975 2339 aa0.08□□□□□ -2.4
RNU4-63P-201ENST00000411313 ASXL2Q76L83 1435 aa0.08□□□□□ -2.4
RNU4-63P-201ENST00000411313 LOC101059948A0A1B0GTJ6 334 aa0.08□□□□□ -2.4
RNU4-63P-201ENST00000411313 POTEB3A0JP26 581 aa0.08□□□□□ -2.4
RNU4-63P-201ENST00000411313 ITGBL1O95965 494 aaPredicted RBP0.08□□□□□ -2.4
RNU4-63P-201ENST00000411313 HNRNPA3P51991 378 aaKnown RBP0.08□□□□□ -2.4
RNU4-63P-201ENST00000411313 DGKQP52824 942 aa0.08□□□□□ -2.4
RNU4-63P-201ENST00000411313 COL13A1Q5TAT6 717 aaPredicted RBP0.08□□□□□ -2.4
RNU4-63P-201ENST00000411313 POTEBQ6S5H4 581 aa0.08□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms