RNA–Protein interactions for RNA: ENST00000410569.1

RNU4-25P-201, Transcript of RNA, U4 small nuclear 25, pseudogene, humanhuman

BASIC

Gene RNU4-25P, Length 230 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-25P-201ENST00000410569 PLCG2P16885 1265 aa8.64□□□□□ -1.03
RNU4-25P-201ENST00000410569 MAMSTRQ6ZN01 415 aa8.64□□□□□ -1.03
RNU4-25P-201ENST00000410569 RNF25Q96BH1 459 aaPredicted RBP8.64□□□□□ -1.03
RNU4-25P-201ENST00000410569 DNMBPQ6XZF7 1577 aa8.64□□□□□ -1.03
RNU4-25P-201ENST00000410569 RIOK3O14730 519 aaKnown RBP8.63□□□□□ -1.03
RNU4-25P-201ENST00000410569 OCEL1Q9H607 264 aa8.63□□□□□ -1.03
RNU4-25P-201ENST00000410569 GOLGA2Q08379 1002 aa8.61□□□□□ -1.03
RNU4-25P-201ENST00000410569 MKRN3Q13064 507 aaKnown RBP8.61□□□□□ -1.03
RNU4-25P-201ENST00000410569 PKD2Q13563 968 aa8.61□□□□□ -1.03
RNU4-25P-201ENST00000410569 CCDC88BA6NC98 1476 aa8.61□□□□□ -1.03
RNU4-25P-201ENST00000410569 SCUBE2Q9NQ36 999 aa8.6□□□□□ -1.03
RNU4-25P-201ENST00000410569 PDCD7Q8N8D1 485 aaKnown RBP8.59□□□□□ -1.03
RNU4-25P-201ENST00000410569 CABP2Q9NPB3 220 aa8.59□□□□□ -1.03
RNU4-25P-201ENST00000410569 VGFO15240 615 aaPredicted RBP8.58□□□□□ -1.04
RNU4-25P-201ENST00000410569 ECM2O94769 699 aaPredicted RBP8.58□□□□□ -1.04
RNU4-25P-201ENST00000410569 ILDR1Q86SU0 546 aaPredicted RBP8.58□□□□□ -1.04
RNU4-25P-201ENST00000410569 ABCC8Q09428 1581 aa8.57□□□□□ -1.04
RNU4-25P-201ENST00000410569 CLASP1Q7Z460 1538 aa8.57□□□□□ -1.04
RNU4-25P-201ENST00000410569 AQRO60306 1485 aaKnown RBP eCLIP8.57□□□□□ -1.04
RNU4-25P-201ENST00000410569 POLA1P09884 1462 aaPredicted RBP8.57□□□□□ -1.04
RNU4-25P-201ENST00000410569 CYB5RLQ6IPT4 315 aa8.56□□□□□ -1.04
RNU4-25P-201ENST00000410569 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.56□□□□□ -1.04
RNU4-25P-201ENST00000410569 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.55□□□□□ -1.04
RNU4-25P-201ENST00000410569 ZFP91Q96JP5 570 aaPredicted RBP8.55□□□□□ -1.04
RNU4-25P-201ENST00000410569 SNAPC4Q5SXM2 1469 aa8.53□□□□□ -1.04
RNU4-25P-201ENST00000410569 WDR97A6NE52 1622 aa8.53□□□□□ -1.04
RNU4-25P-201ENST00000410569 RGL2O15211 777 aa8.52□□□□□ -1.05
RNU4-25P-201ENST00000410569 EFCAB3Q8N7B9 438 aa8.52□□□□□ -1.05
RNU4-25P-201ENST00000410569 TAOK2Q9UL54 1235 aa8.52□□□□□ -1.05
RNU4-25P-201ENST00000410569 SYNJ1O43426 1573 aa8.52□□□□□ -1.05
RNU4-25P-201ENST00000410569 RAD54L2Q9Y4B4 1467 aa8.51□□□□□ -1.05
RNU4-25P-201ENST00000410569 PBRM1Q86U86 1689 aa8.51□□□□□ -1.05
RNU4-25P-201ENST00000410569 L3MBTL3Q96JM7 780 aaPredicted RBP8.5□□□□□ -1.05
RNU4-25P-201ENST00000410569 FGD5Q6ZNL6 1462 aa8.49□□□□□ -1.05
RNU4-25P-201ENST00000410569 DPY19L2Q6NUT2 758 aa8.48□□□□□ -1.05
RNU4-25P-201ENST00000410569 MAGI1Q96QZ7 1491 aaPredicted RBP8.48□□□□□ -1.05
RNU4-25P-201ENST00000410569 SOX12O15370 315 aa8.47□□□□□ -1.05
RNU4-25P-201ENST00000410569 BCL11BQ9C0K0 894 aaPredicted RBP8.47□□□□□ -1.05
RNU4-25P-201ENST00000410569 CUX1P39880 1505 aa8.47□□□□□ -1.05
RNU4-25P-201ENST00000410569 TDRD9Q8NDG6 1382 aaKnown RBP8.47□□□□□ -1.05
RNU4-25P-201ENST00000410569 SLAIN1Q8ND83 568 aa8.46□□□□□ -1.06
RNU4-25P-201ENST00000410569 SOGA1O94964 1423 aa8.46□□□□□ -1.06
RNU4-25P-201ENST00000410569 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.45□□□□□ -1.06
RNU4-25P-201ENST00000410569 STK24Q9Y6E0 443 aa8.45□□□□□ -1.06
RNU4-25P-201ENST00000410569 GRIN2BQ13224 1484 aa8.45□□□□□ -1.06
RNU4-25P-201ENST00000410569 ABCA5Q8WWZ7 1642 aa8.44□□□□□ -1.06
RNU4-25P-201ENST00000410569 STK25O00506 426 aa8.44□□□□□ -1.06
RNU4-25P-201ENST00000410569 SYNJ2O15056 1496 aa8.44□□□□□ -1.06
RNU4-25P-201ENST00000410569 BOLA1Q9Y3E2 137 aa8.43□□□□□ -1.06
RNU4-25P-201ENST00000410569 ERCC6L2Q5T890 1561 aa8.43□□□□□ -1.06
RNU4-25P-201ENST00000410569 C3orf67Q6ZVT6 689 aa8.42□□□□□ -1.06
RNU4-25P-201ENST00000410569 MS4A4AQ96JQ5 239 aa8.42□□□□□ -1.06
RNU4-25P-201ENST00000410569 PHF8Q9UPP1 1060 aa8.42□□□□□ -1.06
RNU4-25P-201ENST00000410569 GAPVD1Q14C86 1478 aa8.42□□□□□ -1.06
RNU4-25P-201ENST00000410569 LCE2DQ5TA82 110 aaPredicted RBP8.41□□□□□ -1.06
RNU4-25P-201ENST00000410569 TMEM121BQ9BXQ6 578 aaPredicted RBP8.41□□□□□ -1.06
RNU4-25P-201ENST00000410569 KIF13AQ9H1H9 1805 aa8.39□□□□□ -1.07
RNU4-25P-201ENST00000410569 NLRP6P59044 892 aa8.39□□□□□ -1.07
RNU4-25P-201ENST00000410569 FBXO22Q8NEZ5 403 aa8.39□□□□□ -1.07
RNU4-25P-201ENST00000410569 FAM163AQ96GL9 167 aaPredicted RBP8.39□□□□□ -1.07
RNU4-25P-201ENST00000410569 ADAMTS12P58397 1594 aa8.39□□□□□ -1.07
RNU4-25P-201ENST00000410569 CEP170Q5SW79 1584 aa8.39□□□□□ -1.07
RNU4-25P-201ENST00000410569 G3V3G9 751 aa8.38□□□□□ -1.07
RNU4-25P-201ENST00000410569 CHMP7Q8WUX9 453 aaPredicted RBP8.38□□□□□ -1.07
RNU4-25P-201ENST00000410569 MFRPQ9BY79 579 aa8.38□□□□□ -1.07
RNU4-25P-201ENST00000410569 SHROOM2Q13796 1616 aa8.37□□□□□ -1.07
RNU4-25P-201ENST00000410569 ABCA10Q8WWZ4 1543 aa8.37□□□□□ -1.07
RNU4-25P-201ENST00000410569 MICALL2Q8IY33 904 aa8.36□□□□□ -1.07
RNU4-25P-201ENST00000410569 GRIN2AQ12879 1464 aa8.36□□□□□ -1.07
RNU4-25P-201ENST00000410569 POTEMA6NI47 508 aa8.35□□□□□ -1.07
RNU4-25P-201ENST00000410569 HS6ST3Q8IZP7 471 aa8.35□□□□□ -1.07
RNU4-25P-201ENST00000410569 SNPHO15079 494 aa8.34□□□□□ -1.07
RNU4-25P-201ENST00000410569 POTEGQ6S5H5 508 aa8.34□□□□□ -1.07
RNU4-25P-201ENST00000410569 NUP160Q12769 1436 aa8.33□□□□□ -1.08
RNU4-25P-201ENST00000410569 ST18O60284 1047 aa8.32□□□□□ -1.08
RNU4-25P-201ENST00000410569 BIVM-ERCC5R4GMW8 1640 aa8.32□□□□□ -1.08
RNU4-25P-201ENST00000410569 CHGAP10645 457 aaKnown RBP8.29□□□□□ -1.08
RNU4-25P-201ENST00000410569 TMEM92Q6UXU6 159 aa8.29□□□□□ -1.08
RNU4-25P-201ENST00000410569 RUSC2Q8N2Y8 1516 aa8.29□□□□□ -1.08
RNU4-25P-201ENST00000410569 TOP2BQ02880 1626 aa8.28□□□□□ -1.08
RNU4-25P-201ENST00000410569 DIP2BQ9P265 1576 aa8.27□□□□□ -1.09
RNU4-25P-201ENST00000410569 ERICH3Q5RHP9 1530 aa8.26□□□□□ -1.09
RNU4-25P-201ENST00000410569 FHAD1B1AJZ9 1412 aa8.26□□□□□ -1.09
RNU4-25P-201ENST00000410569 ADCY10Q96PN6 1610 aa8.25□□□□□ -1.09
RNU4-25P-201ENST00000410569 HOXB3P14651 431 aaPredicted RBP8.25□□□□□ -1.09
RNU4-25P-201ENST00000410569 MAPKBP1O60336 1514 aa8.24□□□□□ -1.09
RNU4-25P-201ENST00000410569 WRNQ14191 1432 aaPredicted RBP eCLIP8.24□□□□□ -1.09
RNU4-25P-201ENST00000410569 PPP1R37O75864 691 aa8.24□□□□□ -1.09
RNU4-25P-201ENST00000410569 NKX1-1Q15270 411 aaPredicted RBP8.24□□□□□ -1.09
RNU4-25P-201ENST00000410569 KDM6BO15054 1643 aa8.24□□□□□ -1.09
RNU4-25P-201ENST00000410569 PCDH10Q9P2E7 1040 aa8.23□□□□□ -1.09
RNU4-25P-201ENST00000410569 ABCC10Q5T3U5 1492 aa8.23□□□□□ -1.09
RNU4-25P-201ENST00000410569 PRG4Q92954 1404 aaPredicted RBP8.22□□□□□ -1.09
RNU4-25P-201ENST00000410569 TSPOAP1O95153 1857 aa8.22□□□□□ -1.09
RNU4-25P-201ENST00000410569 KIF3CO14782 793 aa8.2□□□□□ -1.1
RNU4-25P-201ENST00000410569 DOK7Q18PE1 504 aa8.2□□□□□ -1.1
RNU4-25P-201ENST00000410569 PPRC1Q5VV67 1664 aaKnown RBP8.18□□□□□ -1.1
RNU4-25P-201ENST00000410569 AMER1Q5JTC6 1135 aaPredicted RBP8.18□□□□□ -1.1
RNU4-25P-201ENST00000410569 MARVELD3Q96A59 401 aa8.18□□□□□ -1.1
RNU4-25P-201ENST00000410569 RYDENQ9NUL5 291 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms