RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 WDFY3Q8IZQ1 3526 aa5.16□□□□□ -1.58
RGPD3-202ENST00000409886 NCOA1Q15788 1441 aa5.16□□□□□ -1.58
RGPD3-202ENST00000409886 AKNAQ7Z591 1439 aa5.16□□□□□ -1.58
RGPD3-202ENST00000409886 SETD1BQ9UPS6 1966 aaKnown RBP5.16□□□□□ -1.58
RGPD3-202ENST00000409886 SIGLEC1Q9BZZ2 1709 aa5.15□□□□□ -1.59
RGPD3-202ENST00000409886 RNF17Q9BXT8 1623 aaKnown RBP5.15□□□□□ -1.59
RGPD3-202ENST00000409886 C3P01024 1663 aa5.15□□□□□ -1.59
RGPD3-202ENST00000409886 UHRF1BP1Q6BDS2 1440 aa5.15□□□□□ -1.59
RGPD3-202ENST00000409886 POLR1AO95602 1720 aaPredicted RBP5.14□□□□□ -1.59
RGPD3-202ENST00000409886 GTF3C3Q9Y5Q9 886 aa5.14□□□□□ -1.59
RGPD3-202ENST00000409886 DISP1Q96F81 1524 aa5.14□□□□□ -1.59
RGPD3-202ENST00000409886 LRP5O75197 1615 aa5.14□□□□□ -1.59
RGPD3-202ENST00000409886 VCANP13611 3396 aa5.14□□□□□ -1.59
RGPD3-202ENST00000409886 AGLP35573 1532 aa5.14□□□□□ -1.59
RGPD3-202ENST00000409886 CTTNBP2Q8WZ74 1663 aa5.13□□□□□ -1.59
RGPD3-202ENST00000409886 NPATQ14207 1427 aa5.12□□□□□ -1.59
RGPD3-202ENST00000409886 SUPT6HQ7KZ85 1726 aaKnown RBP5.12□□□□□ -1.59
RGPD3-202ENST00000409886 PTPRKQ15262 1439 aa5.12□□□□□ -1.59
RGPD3-202ENST00000409886 SETD1AO15047 1707 aaKnown RBP5.12□□□□□ -1.59
RGPD3-202ENST00000409886 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.11□□□□□ -1.59
RGPD3-202ENST00000409886 FAM9AQ8IZU1 332 aaPredicted RBP5.11□□□□□ -1.59
RGPD3-202ENST00000409886 KDM5CP41229 1560 aa5.11□□□□□ -1.59
RGPD3-202ENST00000409886 CDK12Q9NYV4 1490 aaPredicted RBP5.11□□□□□ -1.59
RGPD3-202ENST00000409886 KIF14Q15058 1648 aa5.1□□□□□ -1.59
RGPD3-202ENST00000409886 C9orf84Q5VXU9 1444 aa5.1□□□□□ -1.59
RGPD3-202ENST00000409886 MYO3AQ8NEV4 1616 aa5.09□□□□□ -1.59
RGPD3-202ENST00000409886 FAM135AQ9P2D6 1515 aa5.09□□□□□ -1.59
RGPD3-202ENST00000409886 ALKQ9UM73 1620 aa5.09□□□□□ -1.59
RGPD3-202ENST00000409886 GOLGA3Q08378 1498 aa5.09□□□□□ -1.59
RGPD3-202ENST00000409886 CNTLNQ9NXG0 1405 aa5.09□□□□□ -1.59
RGPD3-202ENST00000409886 TCOF1Q13428 1488 aaKnown RBP5.09□□□□□ -1.59
RGPD3-202ENST00000409886 DEPDC5O75140 1603 aa5.09□□□□□ -1.6
RGPD3-202ENST00000409886 DENND4BO75064 1496 aaPredicted RBP5.08□□□□□ -1.6
RGPD3-202ENST00000409886 XIRP2A4UGR9 3374 aa5.07□□□□□ -1.6
RGPD3-202ENST00000409886 SPTBN5Q9NRC6 3674 aaKnown RBP5.07□□□□□ -1.6
RGPD3-202ENST00000409886 CAMSAP1Q5T5Y3 1602 aa5.07□□□□□ -1.6
RGPD3-202ENST00000409886 RAPGEF2Q9Y4G8 1499 aa5.06□□□□□ -1.6
RGPD3-202ENST00000409886 ACIN1Q9UKV3 1341 aaKnown RBP5.06□□□□□ -1.6
RGPD3-202ENST00000409886 LRRIQ1Q96JM4 1722 aa5.06□□□□□ -1.6
RGPD3-202ENST00000409886 ATP10AO60312 1499 aa5.06□□□□□ -1.6
RGPD3-202ENST00000409886 HECW1Q76N89 1606 aa5.06□□□□□ -1.6
RGPD3-202ENST00000409886 CDK13Q14004 1512 aaKnown RBP5.06□□□□□ -1.6
RGPD3-202ENST00000409886 KCNH8Q96L42 1107 aa5.05□□□□□ -1.6
RGPD3-202ENST00000409886 LAMA3Q16787 3333 aa5.05□□□□□ -1.6
RGPD3-202ENST00000409886 TRAPPC8Q9Y2L5 1435 aa5.05□□□□□ -1.6
RGPD3-202ENST00000409886 RAPGEF6Q8TEU7 1601 aa5.05□□□□□ -1.6
RGPD3-202ENST00000409886 VWDEQ8N2E2 1590 aa5.05□□□□□ -1.6
RGPD3-202ENST00000409886 TTBK1Q5TCY1 1321 aaPredicted RBP5.04□□□□□ -1.6
RGPD3-202ENST00000409886 FOXD1Q16676 465 aa5.04□□□□□ -1.6
RGPD3-202ENST00000409886 PKD2Q13563 968 aa5.04□□□□□ -1.6
RGPD3-202ENST00000409886 CEP170BQ9Y4F5 1589 aaPredicted RBP5.03□□□□□ -1.6
RGPD3-202ENST00000409886 NHSL1Q5SYE7 1610 aa5.03□□□□□ -1.6
RGPD3-202ENST00000409886 PHF23Q9BUL5 403 aaPredicted RBP5.03□□□□□ -1.6
RGPD3-202ENST00000409886 BPTFQ12830 3046 aa5.02□□□□□ -1.61
RGPD3-202ENST00000409886 NEURL4Q96JN8 1562 aa5.02□□□□□ -1.61
RGPD3-202ENST00000409886 LRRC9Q6ZRR7 1453 aa5.02□□□□□ -1.61
RGPD3-202ENST00000409886 DIP2CQ9Y2E4 1556 aa5.02□□□□□ -1.61
RGPD3-202ENST00000409886 DNAH14Q0VDD8 3507 aa5.01□□□□□ -1.61
RGPD3-202ENST00000409886 HSPA2P54652 639 aa5.01□□□□□ -1.61
RGPD3-202ENST00000409886 SHPRHQ149N8 1683 aa5.01□□□□□ -1.61
RGPD3-202ENST00000409886 MED14O60244 1454 aa5.01□□□□□ -1.61
RGPD3-202ENST00000409886 SZT2Q5T011 3432 aa5□□□□□ -1.61
RGPD3-202ENST00000409886 MYO5CQ9NQX4 1742 aa5□□□□□ -1.61
RGPD3-202ENST00000409886 SHANK2Q9UPX8 1470 aa5□□□□□ -1.61
RGPD3-202ENST00000409886 TRIM26Q12899 539 aaPredicted RBP5□□□□□ -1.61
RGPD3-202ENST00000409886 KIF27Q86VH2 1401 aa5□□□□□ -1.61
RGPD3-202ENST00000409886 IFFO2Q5TF58 517 aa4.99□□□□□ -1.61
RGPD3-202ENST00000409886 LRRC7Q96NW7 1537 aa4.99□□□□□ -1.61
RGPD3-202ENST00000409886 UBAP1LF5GYI3 381 aa4.99□□□□□ -1.61
RGPD3-202ENST00000409886 TOM1O60784 492 aa4.99□□□□□ -1.61
RGPD3-202ENST00000409886 MIER1Q8N108 512 aa4.99□□□□□ -1.61
RGPD3-202ENST00000409886 IQGAP1P46940 1657 aa4.98□□□□□ -1.61
RGPD3-202ENST00000409886 HSPA1LP34931 641 aa4.98□□□□□ -1.61
RGPD3-202ENST00000409886 CSRNP3Q8WYN3 585 aa4.98□□□□□ -1.61
RGPD3-202ENST00000409886 IGF1RP08069 1367 aa4.98□□□□□ -1.61
RGPD3-202ENST00000409886 YTHDC1Q96MU7 727 aaKnown RBP4.98□□□□□ -1.61
RGPD3-202ENST00000409886 SAMD9Q5K651 1589 aa4.98□□□□□ -1.61
RGPD3-202ENST00000409886 ABCA6Q8N139 1617 aa4.98□□□□□ -1.61
RGPD3-202ENST00000409886 XIRP1Q702N8 1843 aaKnown RBP4.98□□□□□ -1.61
RGPD3-202ENST00000409886 ITSN2Q9NZM3 1697 aa4.98□□□□□ -1.61
RGPD3-202ENST00000409886 DNMT1P26358 1616 aaKnown RBP4.97□□□□□ -1.61
RGPD3-202ENST00000409886 A2ML1A8K2U0 1454 aa4.97□□□□□ -1.61
RGPD3-202ENST00000409886 MYO15AQ9UKN7 3530 aa4.97□□□□□ -1.61
RGPD3-202ENST00000409886 BRCA2P51587 3418 aa4.97□□□□□ -1.61
RGPD3-202ENST00000409886 KDM5DQ9BY66 1539 aa4.97□□□□□ -1.61
RGPD3-202ENST00000409886 LAMA2P24043 3122 aaKnown RBP4.97□□□□□ -1.61
RGPD3-202ENST00000409886 ZC3H13Q5T200 1668 aaKnown RBP4.97□□□□□ -1.61
RGPD3-202ENST00000409886 ATP10BO94823 1461 aa4.97□□□□□ -1.61
RGPD3-202ENST00000409886 MLH3Q9UHC1 1453 aa4.96□□□□□ -1.62
RGPD3-202ENST00000409886 ZNF518AQ6AHZ1 1483 aa4.96□□□□□ -1.62
RGPD3-202ENST00000409886 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.96□□□□□ -1.62
RGPD3-202ENST00000409886 BCL11AQ9H165 835 aa4.96□□□□□ -1.62
RGPD3-202ENST00000409886 RGS17Q9UGC6 210 aaPredicted RBP4.96□□□□□ -1.62
RGPD3-202ENST00000409886 STRCP1A6NGW2 1772 aa4.95□□□□□ -1.62
RGPD3-202ENST00000409886 ARID4BQ4LE39 1312 aaPredicted RBP4.95□□□□□ -1.62
RGPD3-202ENST00000409886 CEP350Q5VT06 3117 aa4.95□□□□□ -1.62
RGPD3-202ENST00000409886 FAM135BQ49AJ0 1406 aa4.95□□□□□ -1.62
RGPD3-202ENST00000409886 PLXNC1O60486 1568 aa4.95□□□□□ -1.62
RGPD3-202ENST00000409886 ABCC3O15438 1527 aa4.94□□□□□ -1.62
RGPD3-202ENST00000409886 SPHKAPQ2M3C7 1700 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms