RNA–Protein interactions for RNA: ENST00000409080.5

ITGA6-202, Transcript of integrin subunit alpha 6, humanhuman

TSL 2 BASIC

Gene ITGA6, Length 5,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-202ENST00000409080 FTSJ3Q8IY81 847 aaKnown RBP18.46■□□□□ 0.55
ITGA6-202ENST00000409080 FAM69CQ0P6D2 419 aa18.46■□□□□ 0.55
ITGA6-202ENST00000409080 KANK4Q5T7N3 995 aaPredicted RBP18.46■□□□□ 0.55
ITGA6-202ENST00000409080 ANP32BQ92688 251 aaKnown RBP18.45■□□□□ 0.54
ITGA6-202ENST00000409080 CSB-PGBD3P0DP91 1061 aa18.45■□□□□ 0.54
ITGA6-202ENST00000409080 MS4A1P11836 297 aa18.45■□□□□ 0.54
ITGA6-202ENST00000409080 MPHOSPH9Q99550 1183 aa18.44■□□□□ 0.54
ITGA6-202ENST00000409080 SOX12O15370 315 aa18.44■□□□□ 0.54
ITGA6-202ENST00000409080 NEUROD2Q15784 382 aa18.44■□□□□ 0.54
ITGA6-202ENST00000409080 MRC2Q9UBG0 1479 aa18.43■□□□□ 0.54
ITGA6-202ENST00000409080 CC2D1BQ5T0F9 858 aaKnown RBP18.43■□□□□ 0.54
ITGA6-202ENST00000409080 RTF1Q92541 710 aaKnown RBP18.41■□□□□ 0.54
ITGA6-202ENST00000409080 GRIN2BQ13224 1484 aa18.41■□□□□ 0.54
ITGA6-202ENST00000409080 ROCK2O75116 1388 aaKnown RBP18.4■□□□□ 0.54
ITGA6-202ENST00000409080 UACAQ9BZF9 1416 aa18.4■□□□□ 0.54
ITGA6-202ENST00000409080 RAD54L2Q9Y4B4 1467 aa18.39■□□□□ 0.53
ITGA6-202ENST00000409080 CASC1Q6TDU7 716 aa18.39■□□□□ 0.53
ITGA6-202ENST00000409080 CHMP4AQ9BY43 222 aa18.38■□□□□ 0.53
ITGA6-202ENST00000409080 TERF2IPQ9NYB0 399 aa18.38■□□□□ 0.53
ITGA6-202ENST00000409080 CC2D2AQ9P2K1 1620 aa18.38■□□□□ 0.53
ITGA6-202ENST00000409080 CCDC9Q9Y3X0 531 aaKnown RBP18.37■□□□□ 0.53
ITGA6-202ENST00000409080 IFT140Q96RY7 1462 aa18.37■□□□□ 0.53
ITGA6-202ENST00000409080 AQRO60306 1485 aaKnown RBP eCLIP18.36■□□□□ 0.53
ITGA6-202ENST00000409080 NGDNQ8NEJ9 315 aaKnown RBP18.36■□□□□ 0.53
ITGA6-202ENST00000409080 GOLGA2Q08379 1002 aa18.34■□□□□ 0.53
ITGA6-202ENST00000409080 IGF1RP08069 1367 aa18.33■□□□□ 0.53
ITGA6-202ENST00000409080 CALD1Q05682 793 aaKnown RBP18.33■□□□□ 0.53
ITGA6-202ENST00000409080 VGFO15240 615 aaPredicted RBP18.32■□□□□ 0.52
ITGA6-202ENST00000409080 OS9Q13438 667 aaPredicted RBP18.32■□□□□ 0.52
ITGA6-202ENST00000409080 HMGXB3Q12766 1538 aa18.31■□□□□ 0.52
ITGA6-202ENST00000409080 MIER1Q8N108 512 aa18.31■□□□□ 0.52
ITGA6-202ENST00000409080 FOXD1Q16676 465 aa18.3■□□□□ 0.52
ITGA6-202ENST00000409080 KTN1Q86UP2 1357 aaKnown RBP18.3■□□□□ 0.52
ITGA6-202ENST00000409080 RAB3GAP2Q9H2M9 1393 aa18.3■□□□□ 0.52
ITGA6-202ENST00000409080 CFTRP13569 1480 aa18.29■□□□□ 0.52
ITGA6-202ENST00000409080 CCDC144AA2RUR9 1427 aa18.28■□□□□ 0.52
ITGA6-202ENST00000409080 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.27■□□□□ 0.52
ITGA6-202ENST00000409080 TMX4Q9H1E5 349 aaPredicted RBP18.26■□□□□ 0.51
ITGA6-202ENST00000409080 HSPA5P11021 654 aaKnown RBP18.25■□□□□ 0.51
ITGA6-202ENST00000409080 CDK11BP21127 795 aaKnown RBP18.24■□□□□ 0.51
ITGA6-202ENST00000409080 NUTM2DQ5VT03 806 aaPredicted RBP18.23■□□□□ 0.51
ITGA6-202ENST00000409080 FRAT1Q92837 279 aaPredicted RBP18.23■□□□□ 0.51
ITGA6-202ENST00000409080 MYOM3Q5VTT5 1437 aa18.22■□□□□ 0.51
ITGA6-202ENST00000409080 BECN1Q14457 450 aa18.22■□□□□ 0.51
ITGA6-202ENST00000409080 PRG4Q92954 1404 aaPredicted RBP18.21■□□□□ 0.51
ITGA6-202ENST00000409080 SYNJ2O15056 1496 aa18.21■□□□□ 0.51
ITGA6-202ENST00000409080 AMPHP49418 695 aa18.2■□□□□ 0.5
ITGA6-202ENST00000409080 RALBP1Q15311 655 aa18.2■□□□□ 0.5
ITGA6-202ENST00000409080 NCLP19338 710 aaKnown RBP18.19■□□□□ 0.5
ITGA6-202ENST00000409080 U2AF1L5P0DN76 240 aaPredicted RBP18.19■□□□□ 0.5
ITGA6-202ENST00000409080 U2AF1Q01081 240 aaKnown RBP eCLIP18.19■□□□□ 0.5
ITGA6-202ENST00000409080 NESP48681 1621 aa18.18■□□□□ 0.5
ITGA6-202ENST00000409080 PRDM2Q13029 1718 aa18.18■□□□□ 0.5
ITGA6-202ENST00000409080 CUX1P39880 1505 aa18.17■□□□□ 0.5
ITGA6-202ENST00000409080 IPO8O15397 1037 aaKnown RBP18.16■□□□□ 0.5
ITGA6-202ENST00000409080 HDAC5Q9UQL6 1122 aa18.16■□□□□ 0.5
ITGA6-202ENST00000409080 TRAK1Q9UPV9 953 aa18.15■□□□□ 0.5
ITGA6-202ENST00000409080 IRX6P78412 446 aaPredicted RBP18.15■□□□□ 0.5
ITGA6-202ENST00000409080 RUSC2Q8N2Y8 1516 aa18.14■□□□□ 0.5
ITGA6-202ENST00000409080 LMOD3Q0VAK6 560 aa18.14■□□□□ 0.49
ITGA6-202ENST00000409080 STAC3Q96MF2 364 aa18.13■□□□□ 0.49
ITGA6-202ENST00000409080 EVC2Q86UK5 1308 aa18.13■□□□□ 0.49
ITGA6-202ENST00000409080 DDRGK1Q96HY6 314 aa18.13■□□□□ 0.49
ITGA6-202ENST00000409080 TOPBP1Q92547 1522 aa18.13■□□□□ 0.49
ITGA6-202ENST00000409080 L3MBTL2Q969R5 705 aa18.12■□□□□ 0.49
ITGA6-202ENST00000409080 ZNF330Q9Y3S2 320 aaPredicted RBP18.12■□□□□ 0.49
ITGA6-202ENST00000409080 EVA1CP58658 441 aa18.11■□□□□ 0.49
ITGA6-202ENST00000409080 STK31Q9BXU1 1019 aa18.11■□□□□ 0.49
ITGA6-202ENST00000409080 MEX3CQ5U5Q3 659 aaKnown RBP18.11■□□□□ 0.49
ITGA6-202ENST00000409080 GOLGA6L22H0YM25 854 aa18.1■□□□□ 0.49
ITGA6-202ENST00000409080 NUTM2FA1L443 756 aa18.1■□□□□ 0.49
ITGA6-202ENST00000409080 CFAP44Q96MT7 982 aa18.1■□□□□ 0.49
ITGA6-202ENST00000409080 ARHGAP5Q13017 1502 aa18.1■□□□□ 0.49
ITGA6-202ENST00000409080 KCNJ4P48050 445 aa18.1■□□□□ 0.49
ITGA6-202ENST00000409080 FGD1P98174 961 aa18.09■□□□□ 0.49
ITGA6-202ENST00000409080 SENP3-EIF4A1A0A087X0R7 540 aa18.09■□□□□ 0.49
ITGA6-202ENST00000409080 CCER2I3L3R5 266 aa18.09■□□□□ 0.49
ITGA6-202ENST00000409080 ATF3P18847 181 aa18.08■□□□□ 0.49
ITGA6-202ENST00000409080 LAMC3Q9Y6N6 1575 aa18.08■□□□□ 0.48
ITGA6-202ENST00000409080 ZRSR1Q15695 479 aaKnown RBP18.08■□□□□ 0.48
ITGA6-202ENST00000409080 COG3Q96JB2 828 aa18.08■□□□□ 0.48
ITGA6-202ENST00000409080 KIF15Q9NS87 1388 aa18.08■□□□□ 0.48
ITGA6-202ENST00000409080 SNAPC4Q5SXM2 1469 aa18.08■□□□□ 0.48
ITGA6-202ENST00000409080 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.07■□□□□ 0.48
ITGA6-202ENST00000409080 DNMBPQ6XZF7 1577 aa18.06■□□□□ 0.48
ITGA6-202ENST00000409080 PLEKHH2Q8IVE3 1493 aa18.06■□□□□ 0.48
ITGA6-202ENST00000409080 POGZQ7Z3K3 1410 aa18.05■□□□□ 0.48
ITGA6-202ENST00000409080 CASKIN1Q8WXD9 1431 aa18.05■□□□□ 0.48
ITGA6-202ENST00000409080 LTV1Q96GA3 475 aaPredicted RBP18.04■□□□□ 0.48
ITGA6-202ENST00000409080 FYCO1Q9BQS8 1478 aa18.04■□□□□ 0.48
ITGA6-202ENST00000409080 POLA1P09884 1462 aaPredicted RBP18.03■□□□□ 0.48
ITGA6-202ENST00000409080 PSME1Q06323 249 aa18.03■□□□□ 0.48
ITGA6-202ENST00000409080 CGNL1Q0VF96 1302 aa18.02■□□□□ 0.47
ITGA6-202ENST00000409080 ERICH3Q5RHP9 1530 aa18.02■□□□□ 0.47
ITGA6-202ENST00000409080 ANP32EQ9BTT0 268 aa18.02■□□□□ 0.47
ITGA6-202ENST00000409080 DHX57Q6P158 1386 aaKnown RBP18.01■□□□□ 0.47
ITGA6-202ENST00000409080 PHLDB1Q86UU1 1377 aa18.01■□□□□ 0.47
ITGA6-202ENST00000409080 C1orf141Q5JVX7 400 aa18.01■□□□□ 0.47
ITGA6-202ENST00000409080 EFCAB5A4FU69 1503 aa18■□□□□ 0.47
ITGA6-202ENST00000409080 SUPT16HQ9Y5B9 1047 aaKnown RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms