RNA–Protein interactions for RNA: ENST00000406921.7

ITSN2-203, Transcript of intersectin 2, humanhuman

TSL 1 (best) BASIC

Gene ITSN2, Length 4,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-203ENST00000406921 PTPRGP23470 1445 aa19.62■□□□□ 0.73
ITSN2-203ENST00000406921 WASHC2CQ9Y4E1 1318 aa19.6■□□□□ 0.73
ITSN2-203ENST00000406921 AQRO60306 1485 aaKnown RBP eCLIP19.59■□□□□ 0.734e-6■■□□□ 11.8
ITSN2-203ENST00000406921 MORC1Q86VD1 984 aa19.59■□□□□ 0.73
ITSN2-203ENST00000406921 HDGFP51858 240 aaKnown RBP19.59■□□□□ 0.73
ITSN2-203ENST00000406921 NBR1Q14596 966 aa19.58■□□□□ 0.73
ITSN2-203ENST00000406921 FTSJ3Q8IY81 847 aaKnown RBP19.58■□□□□ 0.72
ITSN2-203ENST00000406921 OSCARQ8IYS5 282 aa19.57■□□□□ 0.72
ITSN2-203ENST00000406921 GAPVD1Q14C86 1478 aa19.57■□□□□ 0.72
ITSN2-203ENST00000406921 ROCK2O75116 1388 aaKnown RBP19.56■□□□□ 0.72
ITSN2-203ENST00000406921 NCAPD3P42695 1498 aa19.56■□□□□ 0.72
ITSN2-203ENST00000406921 CCDC18Q5T9S5 1454 aa19.55■□□□□ 0.72
ITSN2-203ENST00000406921 NUTM2FA1L443 756 aa19.54■□□□□ 0.72
ITSN2-203ENST00000406921 ZNF644Q9H582 1327 aaPredicted RBP19.53■□□□□ 0.72
ITSN2-203ENST00000406921 PAK3O75914 559 aaPredicted RBP19.51■□□□□ 0.71
ITSN2-203ENST00000406921 RGS3P49796 1198 aa19.51■□□□□ 0.71
ITSN2-203ENST00000406921 NESP48681 1621 aa19.5■□□□□ 0.71
ITSN2-203ENST00000406921 RSPH4AQ5TD94 716 aa19.5■□□□□ 0.71
ITSN2-203ENST00000406921 B4GALNT3Q6L9W6 998 aa19.5■□□□□ 0.71
ITSN2-203ENST00000406921 DNAJC5BQ9UF47 199 aa19.49■□□□□ 0.71
ITSN2-203ENST00000406921 TRAK1Q9UPV9 953 aa19.48■□□□□ 0.71
ITSN2-203ENST00000406921 U2AF1L5P0DN76 240 aaPredicted RBP19.44■□□□□ 0.7
ITSN2-203ENST00000406921 U2AF1Q01081 240 aaKnown RBP eCLIP19.44■□□□□ 0.7
ITSN2-203ENST00000406921 ST20-MTHFSA0A0A6YYL1 179 aa19.43■□□□□ 0.7
ITSN2-203ENST00000406921 HDGFL2Q7Z4V5 671 aaPredicted RBP19.43■□□□□ 0.7
ITSN2-203ENST00000406921 DHX57Q6P158 1386 aaKnown RBP19.41■□□□□ 0.7
ITSN2-203ENST00000406921 KTN1Q86UP2 1357 aaKnown RBP19.4■□□□□ 0.7
ITSN2-203ENST00000406921 CCER2I3L3R5 266 aa19.39■□□□□ 0.69
ITSN2-203ENST00000406921 PPP4R2Q9NY27 417 aa19.37■□□□□ 0.69
ITSN2-203ENST00000406921 FAM69CQ0P6D2 419 aa19.36■□□□□ 0.69
ITSN2-203ENST00000406921 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.34■□□□□ 0.69
ITSN2-203ENST00000406921 EID1Q9Y6B2 187 aa19.34■□□□□ 0.69
ITSN2-203ENST00000406921 ANP32BQ92688 251 aaKnown RBP19.33■□□□□ 0.68
ITSN2-203ENST00000406921 CCDC144AA2RUR9 1427 aa19.33■□□□□ 0.68
ITSN2-203ENST00000406921 PHLDB1Q86UU1 1377 aa19.32■□□□□ 0.68
ITSN2-203ENST00000406921 PNNQ9H307 717 aaKnown RBP19.32■□□□□ 0.68
ITSN2-203ENST00000406921 AFAP1Q8N556 730 aa19.32■□□□□ 0.68
ITSN2-203ENST00000406921 CFTRP13569 1480 aa19.32■□□□□ 0.68
ITSN2-203ENST00000406921 CCDC146Q8IYE0 955 aa19.31■□□□□ 0.68
ITSN2-203ENST00000406921 NGDNQ8NEJ9 315 aaKnown RBP19.31■□□□□ 0.68
ITSN2-203ENST00000406921 RTF1Q92541 710 aaKnown RBP19.3■□□□□ 0.68
ITSN2-203ENST00000406921 NPHP1O15259 732 aa19.3■□□□□ 0.68
ITSN2-203ENST00000406921 CSB-PGBD3P0DP91 1061 aa19.3■□□□□ 0.68
ITSN2-203ENST00000406921 OS9Q13438 667 aaPredicted RBP19.28■□□□□ 0.68
ITSN2-203ENST00000406921 LTV1Q96GA3 475 aaPredicted RBP19.28■□□□□ 0.68
ITSN2-203ENST00000406921 TPRNQ4KMQ1 711 aa19.28■□□□□ 0.68
ITSN2-203ENST00000406921 RALBP1Q15311 655 aa19.27■□□□□ 0.68
ITSN2-203ENST00000406921 APBB1O00213 710 aa19.27■□□□□ 0.68
ITSN2-203ENST00000406921 TERF2IPQ9NYB0 399 aa19.27■□□□□ 0.68
ITSN2-203ENST00000406921 PANK3Q9H999 370 aa19.27■□□□□ 0.67
ITSN2-203ENST00000406921 TAOK2Q9UL54 1235 aa19.26■□□□□ 0.67
ITSN2-203ENST00000406921 ZNF330Q9Y3S2 320 aaPredicted RBP19.25■□□□□ 0.67
ITSN2-203ENST00000406921 SYNJ1O43426 1573 aa19.25■□□□□ 0.67
ITSN2-203ENST00000406921 MINK1Q8N4C8 1332 aaPredicted RBP19.24■□□□□ 0.67
ITSN2-203ENST00000406921 FGD6Q6ZV73 1430 aa19.23■□□□□ 0.67
ITSN2-203ENST00000406921 BECN1Q14457 450 aa19.23■□□□□ 0.67
ITSN2-203ENST00000406921 KIF21BO75037 1637 aa19.23■□□□□ 0.67
ITSN2-203ENST00000406921 CC2D2AQ9P2K1 1620 aa19.23■□□□□ 0.67
ITSN2-203ENST00000406921 NLRP13Q86W25 1043 aa19.23■□□□□ 0.67
ITSN2-203ENST00000406921 EIF3AQ14152 1382 aaKnown RBP19.23■□□□□ 0.67
ITSN2-203ENST00000406921 ARAP1Q96P48 1450 aa19.22■□□□□ 0.67
ITSN2-203ENST00000406921 GRIN2BQ13224 1484 aa19.22■□□□□ 0.67
ITSN2-203ENST00000406921 KIF15Q9NS87 1388 aa19.22■□□□□ 0.67
ITSN2-203ENST00000406921 RCAN3Q9UKA8 241 aa19.21■□□□□ 0.67
ITSN2-203ENST00000406921 RRP7AQ9Y3A4 280 aaKnown RBP19.21■□□□□ 0.67
ITSN2-203ENST00000406921 VGFO15240 615 aaPredicted RBP19.21■□□□□ 0.67
ITSN2-203ENST00000406921 MYOM3Q5VTT5 1437 aa19.21■□□□□ 0.66
ITSN2-203ENST00000406921 CLUAP1Q96AJ1 413 aa19.2■□□□□ 0.66
ITSN2-203ENST00000406921 MS4A1P11836 297 aa19.19■□□□□ 0.66
ITSN2-203ENST00000406921 AMPHP49418 695 aa19.17■□□□□ 0.66
ITSN2-203ENST00000406921 PRG4Q92954 1404 aaPredicted RBP19.17■□□□□ 0.66
ITSN2-203ENST00000406921 USP47Q96K76 1375 aa19.16■□□□□ 0.66
ITSN2-203ENST00000406921 POLA1P09884 1462 aaPredicted RBP19.16■□□□□ 0.66
ITSN2-203ENST00000406921 CASC1Q6TDU7 716 aa19.15■□□□□ 0.66
ITSN2-203ENST00000406921 LRRC9Q6ZRR7 1453 aa19.15■□□□□ 0.66
ITSN2-203ENST00000406921 DDRGK1Q96HY6 314 aa19.15■□□□□ 0.66
ITSN2-203ENST00000406921 TOPBP1Q92547 1522 aa19.15■□□□□ 0.66
ITSN2-203ENST00000406921 CCDC9Q9Y3X0 531 aaKnown RBP19.14■□□□□ 0.66
ITSN2-203ENST00000406921 PRDM2Q13029 1718 aa19.14■□□□□ 0.65
ITSN2-203ENST00000406921 NCLP19338 710 aaKnown RBP19.13■□□□□ 0.65
ITSN2-203ENST00000406921 ELL2O00472 640 aaPredicted RBP19.13■□□□□ 0.65
ITSN2-203ENST00000406921 TMEM132EQ6IEE7 984 aa19.13■□□□□ 0.65
ITSN2-203ENST00000406921 CHMP4BQ9H444 224 aaKnown RBP19.13■□□□□ 0.65
ITSN2-203ENST00000406921 PRKRIP1Q9H875 184 aaPredicted RBP19.13■□□□□ 0.65
ITSN2-203ENST00000406921 GOLGA2Q08379 1002 aa19.12■□□□□ 0.65
ITSN2-203ENST00000406921 ITPRIPQ8IWB1 547 aa19.12■□□□□ 0.65
ITSN2-203ENST00000406921 NCOA2Q15596 1464 aa19.12■□□□□ 0.65
ITSN2-203ENST00000406921 CUX1P39880 1505 aa19.12■□□□□ 0.65
ITSN2-203ENST00000406921 ANKRD50Q9ULJ7 1429 aa19.11■□□□□ 0.65
ITSN2-203ENST00000406921 KCNJ4P48050 445 aa19.11■□□□□ 0.65
ITSN2-203ENST00000406921 CASKIN1Q8WXD9 1431 aa19.1■□□□□ 0.65
ITSN2-203ENST00000406921 EIF5BO60841 1220 aaKnown RBP19.1■□□□□ 0.65
ITSN2-203ENST00000406921 SMC4Q9NTJ3 1288 aa19.1■□□□□ 0.65
ITSN2-203ENST00000406921 BCL2L13Q9BXK5 485 aa19.09■□□□□ 0.65
ITSN2-203ENST00000406921 MRC2Q9UBG0 1479 aa19.09■□□□□ 0.65
ITSN2-203ENST00000406921 IPO8O15397 1037 aaKnown RBP19.08■□□□□ 0.65
ITSN2-203ENST00000406921 FGD1P98174 961 aa19.07■□□□□ 0.64
ITSN2-203ENST00000406921 EVC2Q86UK5 1308 aa19.06■□□□□ 0.64
ITSN2-203ENST00000406921 SLC4A10Q6U841 1118 aa19.06■□□□□ 0.64
ITSN2-203ENST00000406921 NAP1L2Q9ULW6 460 aaPredicted RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms