RNA–Protein interactions for RNA: ENST00000400761.7

PDGFA-202, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-202ENST00000400761 PREX1Q8TCU6 1659 aa28.93■■■□□ 2.22
PDGFA-202ENST00000400761 HECW1Q76N89 1606 aa28.92■■■□□ 2.22
PDGFA-202ENST00000400761 ARHGEF12Q9NZN5 1544 aa28.89■■■□□ 2.21
PDGFA-202ENST00000400761 EEA1Q15075 1411 aa28.87■■■□□ 2.21
PDGFA-202ENST00000400761 STRCQ7RTU9 1775 aa28.87■■■□□ 2.21
PDGFA-202ENST00000400761 DMRT2Q9Y5R5 561 aa28.85■■■□□ 2.21
PDGFA-202ENST00000400761 SCAPERQ9BY12 1400 aa28.82■■■□□ 2.2
PDGFA-202ENST00000400761 ATP10AO60312 1499 aa28.82■■■□□ 2.2
PDGFA-202ENST00000400761 SPATA31D1Q6ZQQ2 1576 aa28.81■■■□□ 2.2
PDGFA-202ENST00000400761 CEBPAP49715 358 aaPredicted RBP28.8■■■□□ 2.2
PDGFA-202ENST00000400761 C9orf84Q5VXU9 1444 aa28.79■■■□□ 2.2
PDGFA-202ENST00000400761 CSRNP3Q8WYN3 585 aa28.79■■■□□ 2.2
PDGFA-202ENST00000400761 RANGAP1P46060 587 aaPredicted RBP28.77■■■□□ 2.2
PDGFA-202ENST00000400761 SETD1BQ9UPS6 1966 aaKnown RBP28.77■■■□□ 2.2
PDGFA-202ENST00000400761 PLCH2O75038 1416 aa28.77■■■□□ 2.2
PDGFA-202ENST00000400761 UHRF1BP1Q6BDS2 1440 aa28.74■■■□□ 2.19
PDGFA-202ENST00000400761 PTPRTO14522 1441 aa28.69■■■□□ 2.18
PDGFA-202ENST00000400761 CDK13Q14004 1512 aaKnown RBP28.69■■■□□ 2.18
PDGFA-202ENST00000400761 EFCAB2Q5VUJ9 269 aa28.64■■■□□ 2.18
PDGFA-202ENST00000400761 MYO5CQ9NQX4 1742 aa28.63■■■□□ 2.17
PDGFA-202ENST00000400761 LTBP4Q8N2S1 1624 aa28.63■■■□□ 2.17
PDGFA-202ENST00000400761 ZNF518AQ6AHZ1 1483 aa28.61■■■□□ 2.17
PDGFA-202ENST00000400761 IQSEC2Q5JU85 1478 aa28.6■■■□□ 2.17
PDGFA-202ENST00000400761 C3P01024 1663 aa28.59■■■□□ 2.17
PDGFA-202ENST00000400761 KDM5CP41229 1560 aa28.58■■■□□ 2.17
PDGFA-202ENST00000400761 DIP2CQ9Y2E4 1556 aa28.56■■■□□ 2.16
PDGFA-202ENST00000400761 REREQ9P2R6 1566 aa28.55■■■□□ 2.16
PDGFA-202ENST00000400761 AFAP1Q8N556 730 aa28.55■■■□□ 2.16
PDGFA-202ENST00000400761 NCOA1Q15788 1441 aa28.5■■■□□ 2.15
PDGFA-202ENST00000400761 TRAPPC8Q9Y2L5 1435 aa28.5■■■□□ 2.15
PDGFA-202ENST00000400761 KIF14Q15058 1648 aa28.5■■■□□ 2.15
PDGFA-202ENST00000400761 EHMT2Q96KQ7 1210 aa28.49■■■□□ 2.15
PDGFA-202ENST00000400761 MYT1LQ9UL68 1186 aa28.49■■■□□ 2.15
PDGFA-202ENST00000400761 ARHGAP5Q13017 1502 aa28.48■■■□□ 2.15
PDGFA-202ENST00000400761 ABCA6Q8N139 1617 aa28.48■■■□□ 2.15
PDGFA-202ENST00000400761 AGLP35573 1532 aa28.46■■■□□ 2.15
PDGFA-202ENST00000400761 CDK11AQ9UQ88 783 aaPredicted RBP28.45■■■□□ 2.14
PDGFA-202ENST00000400761 MLH3Q9UHC1 1453 aa28.45■■■□□ 2.14
PDGFA-202ENST00000400761 ESF1Q9H501 851 aaKnown RBP28.44■■■□□ 2.14
PDGFA-202ENST00000400761 ATP1B4Q9UN42 357 aaPredicted RBP28.43■■■□□ 2.14
PDGFA-202ENST00000400761 TROQ12816 1431 aaPredicted RBP28.4■■■□□ 2.14
PDGFA-202ENST00000400761 FMN1Q68DA7 1419 aa28.39■■■□□ 2.14
PDGFA-202ENST00000400761 CNTLNQ9NXG0 1405 aa28.38■■■□□ 2.13
PDGFA-202ENST00000400761 CAMSAP1Q5T5Y3 1602 aa28.38■■■□□ 2.13
PDGFA-202ENST00000400761 CDC42BPBQ9Y5S2 1711 aa28.38■■■□□ 2.13
PDGFA-202ENST00000400761 CLIP1P30622 1438 aa28.35■■■□□ 2.13
PDGFA-202ENST00000400761 UBAP1LF5GYI3 381 aa28.33■■■□□ 2.13
PDGFA-202ENST00000400761 NPATQ14207 1427 aa28.33■■■□□ 2.13
PDGFA-202ENST00000400761 UBTFP17480 764 aaKnown RBP28.32■■■□□ 2.12
PDGFA-202ENST00000400761 ZNF335Q9H4Z2 1342 aaPredicted RBP28.32■■■□□ 2.12
PDGFA-202ENST00000400761 ABCC1P33527 1531 aa28.32■■■□□ 2.12
PDGFA-202ENST00000400761 MROH2AA6NES4 1674 aa28.31■■■□□ 2.12
PDGFA-202ENST00000400761 KIDINS220Q9ULH0 1771 aa28.31■■■□□ 2.12
PDGFA-202ENST00000400761 ITSN2Q9NZM3 1697 aa28.3■■■□□ 2.12
PDGFA-202ENST00000400761 NCKAP5LQ9HCH0 1330 aa28.29■■■□□ 2.12
PDGFA-202ENST00000400761 PREX2Q70Z35 1606 aa28.29■■■□□ 2.12
PDGFA-202ENST00000400761 ARHGAP35Q9NRY4 1499 aa28.27■■■□□ 2.12
PDGFA-202ENST00000400761 LRRIQ1Q96JM4 1722 aa28.27■■■□□ 2.12
PDGFA-202ENST00000400761 ZMYM3Q14202 1370 aa28.24■■■□□ 2.11
PDGFA-202ENST00000400761 LOC105371045A0A1W2PR82 267 aa28.22■■■□□ 2.11
PDGFA-202ENST00000400761 ZNF142P52746 1687 aaPredicted RBP28.22■■■□□ 2.11
PDGFA-202ENST00000400761 PLA2R1Q13018 1463 aa28.21■■■□□ 2.11
PDGFA-202ENST00000400761 PKD2Q13563 968 aa28.2■■■□□ 2.1
PDGFA-202ENST00000400761 TCOF1Q13428 1488 aaKnown RBP28.18■■■□□ 2.1
PDGFA-202ENST00000400761 SUPT6HQ7KZ85 1726 aaKnown RBP28.18■■■□□ 2.1
PDGFA-202ENST00000400761 MYO3AQ8NEV4 1616 aa28.18■■■□□ 2.1
PDGFA-202ENST00000400761 SAMD9LQ8IVG5 1584 aa28.16■■■□□ 2.1
PDGFA-202ENST00000400761 CEP170BQ9Y4F5 1589 aaPredicted RBP28.15■■■□□ 2.1
PDGFA-202ENST00000400761 CLTCQ00610 1675 aaKnown RBP28.14■■■□□ 2.1
PDGFA-202ENST00000400761 MED1Q15648 1581 aaPredicted RBP28.14■■■□□ 2.1
PDGFA-202ENST00000400761 CDC42BPAQ5VT25 1732 aa28.14■■■□□ 2.1
PDGFA-202ENST00000400761 PTPRKQ15262 1439 aa28.1■■■□□ 2.09
PDGFA-202ENST00000400761 PPP6R1Q9UPN7 881 aa28.1■■■□□ 2.09
PDGFA-202ENST00000400761 HSPA1LP34931 641 aa28.09■■■□□ 2.09
PDGFA-202ENST00000400761 SPAG9O60271 1321 aaKnown RBP28.06■■■□□ 2.08
PDGFA-202ENST00000400761 CCDC18Q5T9S5 1454 aa28.06■■■□□ 2.08
PDGFA-202ENST00000400761 PLXNC1O60486 1568 aa28.05■■■□□ 2.08
PDGFA-202ENST00000400761 SYCP2Q9BX26 1530 aa28.05■■■□□ 2.08
PDGFA-202ENST00000400761 SCAF1Q9H7N4 1312 aaKnown RBP28.04■■■□□ 2.08
PDGFA-202ENST00000400761 ATP7AQ04656 1500 aa28.02■■■□□ 2.08
PDGFA-202ENST00000400761 PIP4K2BP78356 416 aa28.02■■■□□ 2.08
PDGFA-202ENST00000400761 ZNF777Q9ULD5 760 aaPredicted RBP28.02■■■□□ 2.08
PDGFA-202ENST00000400761 A2MP01023 1474 aa28.01■■■□□ 2.07
PDGFA-202ENST00000400761 CASKIN1Q8WXD9 1431 aa28.01■■■□□ 2.07
PDGFA-202ENST00000400761 TOM1O60784 492 aa28■■■□□ 2.07
PDGFA-202ENST00000400761 INO80Q9ULG1 1556 aaPredicted RBP27.99■■■□□ 2.07
PDGFA-202ENST00000400761 HNRNPMP52272 730 aaKnown RBP eCLIP27.99■■■□□ 2.07
PDGFA-202ENST00000400761 A2ML1A8K2U0 1454 aa27.99■■■□□ 2.07
PDGFA-202ENST00000400761 CPS1P31327 1500 aa27.98■■■□□ 2.07
PDGFA-202ENST00000400761 GGT6Q6P531 493 aa27.98■■■□□ 2.07
PDGFA-202ENST00000400761 DNMT1P26358 1616 aaKnown RBP27.98■■■□□ 2.07
PDGFA-202ENST00000400761 GPATCH8Q9UKJ3 1502 aaKnown RBP27.96■■■□□ 2.07
PDGFA-202ENST00000400761 CEP162Q5TB80 1403 aa27.95■■■□□ 2.07
PDGFA-202ENST00000400761 POLR1AO95602 1720 aaPredicted RBP27.95■■■□□ 2.06
PDGFA-202ENST00000400761 SHANK2Q9UPX8 1470 aa27.93■■■□□ 2.06
PDGFA-202ENST00000400761 KIAA1107Q9UPP5 1409 aa27.92■■■□□ 2.06
PDGFA-202ENST00000400761 NEURL4Q96JN8 1562 aa27.92■■■□□ 2.06
PDGFA-202ENST00000400761 PLEKHH2Q8IVE3 1493 aa27.9■■■□□ 2.06
PDGFA-202ENST00000400761 PHF23Q9BUL5 403 aaPredicted RBP27.9■■■□□ 2.06
PDGFA-202ENST00000400761 ADGBQ8N7X0 1667 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms