RNA–Protein interactions for RNA: ENST00000400353.6

LINC00649-202, long intergenic non-protein coding RNA 649, humanhuman

TSL 3

Gene LINC00649, Length 2,090 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-202ENST00000400353 PLB1Q6P1J6 1458 aa15.41■□□□□ 0.06
LINC00649-202ENST00000400353 ARID3CA6NKF2 412 aa15.39■□□□□ 0.05
LINC00649-202ENST00000400353 RRP7BPQ9NSQ0 103 aa15.38■□□□□ 0.05
LINC00649-202ENST00000400353 ABCC5O15440 1437 aa15.38■□□□□ 0.05
LINC00649-202ENST00000400353 PRG4Q92954 1404 aaPredicted RBP15.38■□□□□ 0.05
LINC00649-202ENST00000400353 OSCARQ8IYS5 282 aa15.37■□□□□ 0.05
LINC00649-202ENST00000400353 CHIC2Q9UKJ5 165 aa15.36■□□□□ 0.05
LINC00649-202ENST00000400353 CAMSAP2Q08AD1 1489 aa15.35■□□□□ 0.05
LINC00649-202ENST00000400353 GPATCH8Q9UKJ3 1502 aaKnown RBP15.35■□□□□ 0.05
LINC00649-202ENST00000400353 ADGBQ8N7X0 1667 aa15.34■□□□□ 0.05
LINC00649-202ENST00000400353 KIF14Q15058 1648 aa15.34■□□□□ 0.05
LINC00649-202ENST00000400353 KDM6BO15054 1643 aa15.33■□□□□ 0.04
LINC00649-202ENST00000400353 TRIM52Q96A61 297 aa15.32■□□□□ 0.04
LINC00649-202ENST00000400353 CFDP1Q9UEE9 299 aaPredicted RBP15.32■□□□□ 0.04
LINC00649-202ENST00000400353 PLEKHD1A6NEE1 506 aa15.32■□□□□ 0.04
LINC00649-202ENST00000400353 CLASP1Q7Z460 1538 aa15.31■□□□□ 0.04
LINC00649-202ENST00000400353 ATP10BO94823 1461 aa15.31■□□□□ 0.04
LINC00649-202ENST00000400353 ADGRL2O95490 1459 aa15.31■□□□□ 0.04
LINC00649-202ENST00000400353 CROCC2H7BZ55 1655 aa15.31■□□□□ 0.04
LINC00649-202ENST00000400353 SHROOM2Q13796 1616 aa15.3■□□□□ 0.04
LINC00649-202ENST00000400353 ABCC10Q5T3U5 1492 aa15.3■□□□□ 0.04
LINC00649-202ENST00000400353 PTPRGP23470 1445 aa15.29■□□□□ 0.04
LINC00649-202ENST00000400353 YTHDC1Q96MU7 727 aaKnown RBP15.29■□□□□ 0.04
LINC00649-202ENST00000400353 MPHOSPH9Q99550 1183 aa15.29■□□□□ 0.04
LINC00649-202ENST00000400353 DENND4BO75064 1496 aaPredicted RBP15.29■□□□□ 0.04
LINC00649-202ENST00000400353 SHANK2Q9UPX8 1470 aa15.28■□□□□ 0.04
LINC00649-202ENST00000400353 KDM5BQ9UGL1 1544 aa15.27■□□□□ 0.04
LINC00649-202ENST00000400353 ZNF644Q9H582 1327 aaPredicted RBP15.27■□□□□ 0.04
LINC00649-202ENST00000400353 ERCC6L2Q5T890 1561 aa15.27■□□□□ 0.03
LINC00649-202ENST00000400353 CDC42BPAQ5VT25 1732 aa15.26■□□□□ 0.03
LINC00649-202ENST00000400353 ANKRD30AQ9BXX3 1397 aa15.25■□□□□ 0.03
LINC00649-202ENST00000400353 NCOA1Q15788 1441 aa15.25■□□□□ 0.03
LINC00649-202ENST00000400353 GTF3C3Q9Y5Q9 886 aa15.25■□□□□ 0.03
LINC00649-202ENST00000400353 ARHGEF5Q12774 1597 aa15.22■□□□□ 0.03
LINC00649-202ENST00000400353 ANKRD30BQ9BXX2 1392 aa15.22■□□□□ 0.03
LINC00649-202ENST00000400353 RPRD2Q5VT52 1461 aaKnown RBP15.21■□□□□ 0.03
LINC00649-202ENST00000400353 ZNF777Q9ULD5 760 aaPredicted RBP15.2■□□□□ 0.02
LINC00649-202ENST00000400353 PZPP20742 1482 aa15.19■□□□□ 0.02
LINC00649-202ENST00000400353 DDX10Q13206 875 aaKnown RBP15.18■□□□□ 0.02
LINC00649-202ENST00000400353 PREX2Q70Z35 1606 aa15.18■□□□□ 0.02
LINC00649-202ENST00000400353 SLC4A1APQ9BWU0 796 aaKnown RBP15.18■□□□□ 0.02
LINC00649-202ENST00000400353 ABCC2Q92887 1545 aa15.18■□□□□ 0.02
LINC00649-202ENST00000400353 C9orf84Q5VXU9 1444 aa15.17■□□□□ 0.02
LINC00649-202ENST00000400353 RSPH4AQ5TD94 716 aa15.16■□□□□ 0.02
LINC00649-202ENST00000400353 ANKRD50Q9ULJ7 1429 aa15.16■□□□□ 0.02
LINC00649-202ENST00000400353 KIAA1107Q9UPP5 1409 aa15.15■□□□□ 0.02
LINC00649-202ENST00000400353 KDM5DQ9BY66 1539 aa15.15■□□□□ 0.02
LINC00649-202ENST00000400353 TSPY4P0CV99 314 aa15.15■□□□□ 0.02
LINC00649-202ENST00000400353 TSPY10P0CW01 314 aa15.15■□□□□ 0.02
LINC00649-202ENST00000400353 TEX14Q8IWB6 1497 aa15.14■□□□□ 0.01
LINC00649-202ENST00000400353 CCER2I3L3R5 266 aa15.14■□□□□ 0.01
LINC00649-202ENST00000400353 CCDC141Q6ZP82 1450 aa15.13■□□□□ 0.01
LINC00649-202ENST00000400353 ANP32CO43423 234 aa15.12■□□□□ 0.01
LINC00649-202ENST00000400353 L3MBTL2Q969R5 705 aa15.12■□□□□ 0.01
LINC00649-202ENST00000400353 UHRF1BP1LA0JNW5 1464 aa15.12■□□□□ 0.01
LINC00649-202ENST00000400353 MBD5Q9P267 1494 aa15.12■□□□□ 0.01
LINC00649-202ENST00000400353 CDC42BPBQ9Y5S2 1711 aa15.12■□□□□ 0.01
LINC00649-202ENST00000400353 SAMD9LQ8IVG5 1584 aa15.12■□□□□ 0.01
LINC00649-202ENST00000400353 PLEKHH2Q8IVE3 1493 aa15.12■□□□□ 0.01
LINC00649-202ENST00000400353 EIF4G2P78344 907 aaKnown RBP eCLIP15.12■□□□□ 0.01
LINC00649-202ENST00000400353 MAST1Q9Y2H9 1570 aa15.11■□□□□ 0.01
LINC00649-202ENST00000400353 FOXD1Q16676 465 aa15.09■□□□□ 0.01
LINC00649-202ENST00000400353 HSPA5P11021 654 aaKnown RBP15.08■□□□□ 0.01
LINC00649-202ENST00000400353 HIRIP3Q9BW71 556 aaPredicted RBP15.08■□□□□ 0.01
LINC00649-202ENST00000400353 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.08■□□□□ 0.01
LINC00649-202ENST00000400353 MYO5CQ9NQX4 1742 aa15.08■□□□□ 0
LINC00649-202ENST00000400353 KIF15Q9NS87 1388 aa15.08■□□□□ 0
LINC00649-202ENST00000400353 ARHGAP5Q13017 1502 aa15.07■□□□□ 0
LINC00649-202ENST00000400353 TTC37Q6PGP7 1564 aa15.07■□□□□ 0
LINC00649-202ENST00000400353 HNRNPMP52272 730 aaKnown RBP eCLIP15.05■□□□□ -0
LINC00649-202ENST00000400353 PKD2Q13563 968 aa15.05■□□□□ -0
LINC00649-202ENST00000400353 NUP155O75694 1391 aa15.05■□□□□ -0
LINC00649-202ENST00000400353 ZCCHC11Q5TAX3 1644 aaKnown RBP15.04■□□□□ -0
LINC00649-202ENST00000400353 CYB5RLQ6IPT4 315 aa15.04■□□□□ -0
LINC00649-202ENST00000400353 PLXNC1O60486 1568 aa15.03■□□□□ -0
LINC00649-202ENST00000400353 SYCP2Q9BX26 1530 aa15.03■□□□□ -0
LINC00649-202ENST00000400353 ARHGEF12Q9NZN5 1544 aa15.02■□□□□ -0
LINC00649-202ENST00000400353 DNAJC5Q9H3Z4 198 aa15.01□□□□□ -0.01
LINC00649-202ENST00000400353 RIMBP3CA6NJZ7 1639 aa15.01□□□□□ -0.01
LINC00649-202ENST00000400353 RIMBP3BA6NNM3 1639 aa15.01□□□□□ -0.01
LINC00649-202ENST00000400353 RIMBP3Q9UFD9 1639 aa15.01□□□□□ -0.01
LINC00649-202ENST00000400353 NBPF8Q3BBV2 869 aa15.01□□□□□ -0.01
LINC00649-202ENST00000400353 PLCH2O75038 1416 aa15□□□□□ -0.01
LINC00649-202ENST00000400353 UNC13BO14795 1591 aa15□□□□□ -0.01
LINC00649-202ENST00000400353 WASHC2AQ641Q2 1341 aa15□□□□□ -0.01
LINC00649-202ENST00000400353 UHRF1BP1Q6BDS2 1440 aa15□□□□□ -0.01
LINC00649-202ENST00000400353 CNTLNQ9NXG0 1405 aa15□□□□□ -0.01
LINC00649-202ENST00000400353 POLR1AO95602 1720 aaPredicted RBP15□□□□□ -0.01
LINC00649-202ENST00000400353 ARAP3Q8WWN8 1544 aa15□□□□□ -0.01
LINC00649-202ENST00000400353 SPATA31E1Q6ZUB1 1445 aa14.99□□□□□ -0.01
LINC00649-202ENST00000400353 CCDC7Q96M83 1385 aa14.99□□□□□ -0.01
LINC00649-202ENST00000400353 FAM135AQ9P2D6 1515 aa14.98□□□□□ -0.01
LINC00649-202ENST00000400353 DUOX2Q9NRD8 1548 aa14.97□□□□□ -0.01
LINC00649-202ENST00000400353 KCNH8Q96L42 1107 aa14.97□□□□□ -0.01
LINC00649-202ENST00000400353 EFCAB2Q5VUJ9 269 aa14.96□□□□□ -0.01
LINC00649-202ENST00000400353 ABCC1P33527 1531 aa14.95□□□□□ -0.02
LINC00649-202ENST00000400353 ERBINQ96RT1 1412 aa14.95□□□□□ -0.02
LINC00649-202ENST00000400353 RALGAPBQ86X10 1494 aa14.95□□□□□ -0.02
LINC00649-202ENST00000400353 IQGAP3Q86VI3 1631 aa14.94□□□□□ -0.02
LINC00649-202ENST00000400353 ARID4BQ4LE39 1312 aaPredicted RBP14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms