RNA–Protein interactions for RNA: ENST00000399756.8

TRPV1-202, Transcript of transient receptor potential cation channel subfamily V member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPV1, Length 4,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPV1-202ENST00000399756 NOP58Q9Y2X3 529 aaKnown RBP13.26□□□□□ -0.29
TRPV1-202ENST00000399756 NCOA2Q15596 1464 aa13.26□□□□□ -0.29
TRPV1-202ENST00000399756 STAG3Q9UJ98 1225 aa13.26□□□□□ -0.29
TRPV1-202ENST00000399756 CASKIN1Q8WXD9 1431 aa13.26□□□□□ -0.29
TRPV1-202ENST00000399756 TIAM1Q13009 1591 aa13.24□□□□□ -0.29
TRPV1-202ENST00000399756 ROCK2O75116 1388 aaKnown RBP13.24□□□□□ -0.29
TRPV1-202ENST00000399756 ANKRD30AQ9BXX3 1397 aa13.24□□□□□ -0.29
TRPV1-202ENST00000399756 KIF7Q2M1P5 1343 aa13.23□□□□□ -0.29
TRPV1-202ENST00000399756 NEFMP07197 916 aa13.23□□□□□ -0.29
TRPV1-202ENST00000399756 NBPF8Q3BBV2 869 aa13.23□□□□□ -0.29
TRPV1-202ENST00000399756 TMF1P82094 1093 aa13.22□□□□□ -0.29
TRPV1-202ENST00000399756 NUDCQ9Y266 331 aa13.22□□□□□ -0.29
TRPV1-202ENST00000399756 RCAN3Q9UKA8 241 aa13.21□□□□□ -0.29
TRPV1-202ENST00000399756 POLA1P09884 1462 aaPredicted RBP13.21□□□□□ -0.29
TRPV1-202ENST00000399756 FRAT1Q92837 279 aaPredicted RBP13.21□□□□□ -0.3
TRPV1-202ENST00000399756 USP47Q96K76 1375 aa13.2□□□□□ -0.3
TRPV1-202ENST00000399756 CCDC7Q96M83 1385 aa13.2□□□□□ -0.3
TRPV1-202ENST00000399756 CARMIL2Q6F5E8 1435 aa13.19□□□□□ -0.3
TRPV1-202ENST00000399756 PLIN1O60240 522 aa13.18□□□□□ -0.3
TRPV1-202ENST00000399756 SAFB2Q14151 953 aaKnown RBP eCLIP13.18□□□□□ -0.3
TRPV1-202ENST00000399756 RTN4Q9NQC3 1192 aaKnown RBP13.18□□□□□ -0.3
TRPV1-202ENST00000399756 KTN1Q86UP2 1357 aaKnown RBP13.18□□□□□ -0.3
TRPV1-202ENST00000399756 HMGXB3Q12766 1538 aa13.18□□□□□ -0.3
TRPV1-202ENST00000399756 FYCO1Q9BQS8 1478 aa13.17□□□□□ -0.3
TRPV1-202ENST00000399756 TOPBP1Q92547 1522 aa13.17□□□□□ -0.3
TRPV1-202ENST00000399756 C11orf95C9JLR9 678 aaPredicted RBP13.17□□□□□ -0.3
TRPV1-202ENST00000399756 PPM1GO15355 546 aaPredicted RBP13.17□□□□□ -0.3
TRPV1-202ENST00000399756 PEG3Q9GZU2 1588 aa13.16□□□□□ -0.3
TRPV1-202ENST00000399756 ZBED9Q6R2W3 1325 aa13.16□□□□□ -0.3
TRPV1-202ENST00000399756 DEKP35659 375 aaKnown RBP13.16□□□□□ -0.3
TRPV1-202ENST00000399756 UPF2Q9HAU5 1272 aaKnown RBP13.16□□□□□ -0.3
TRPV1-202ENST00000399756 CDCA8Q53HL2 280 aa13.15□□□□□ -0.3
TRPV1-202ENST00000399756 EIF5BO60841 1220 aaKnown RBP13.15□□□□□ -0.3
TRPV1-202ENST00000399756 ERICH6BQ5W0A0 696 aa13.14□□□□□ -0.31
TRPV1-202ENST00000399756 RALBP1Q15311 655 aa13.14□□□□□ -0.31
TRPV1-202ENST00000399756 CCDC146Q8IYE0 955 aa13.14□□□□□ -0.31
TRPV1-202ENST00000399756 PCF11O94913 1555 aaKnown RBP13.14□□□□□ -0.31
TRPV1-202ENST00000399756 NLRP13Q86W25 1043 aa13.14□□□□□ -0.31
TRPV1-202ENST00000399756 EXOC6Q8TAG9 804 aa13.14□□□□□ -0.31
TRPV1-202ENST00000399756 PANK3Q9H999 370 aa13.13□□□□□ -0.31
TRPV1-202ENST00000399756 HFM1A2PYH4 1435 aa13.13□□□□□ -0.31
TRPV1-202ENST00000399756 NAIPQ13075 1403 aa13.13□□□□□ -0.31
TRPV1-202ENST00000399756 GGT6Q6P531 493 aa13.13□□□□□ -0.31
TRPV1-202ENST00000399756 CC2D2AQ9P2K1 1620 aa13.12□□□□□ -0.31
TRPV1-202ENST00000399756 CNTLNQ9NXG0 1405 aa13.12□□□□□ -0.31
TRPV1-202ENST00000399756 HSP90AA1P07900 732 aaKnown RBP13.11□□□□□ -0.31
TRPV1-202ENST00000399756 NUTM2DQ5VT03 806 aaPredicted RBP13.1□□□□□ -0.31
TRPV1-202ENST00000399756 KIF3BO15066 747 aa13.09□□□□□ -0.31
TRPV1-202ENST00000399756 U2SURPO15042 1029 aaKnown RBP13.09□□□□□ -0.31
TRPV1-202ENST00000399756 ESF1Q9H501 851 aaKnown RBP13.09□□□□□ -0.31
TRPV1-202ENST00000399756 PRDM2Q13029 1718 aa13.08□□□□□ -0.31
TRPV1-202ENST00000399756 MYBBP1AQ9BQG0 1328 aaKnown RBP13.08□□□□□ -0.31
TRPV1-202ENST00000399756 EFCAB2Q5VUJ9 269 aa13.08□□□□□ -0.32
TRPV1-202ENST00000399756 MAPKBP1O60336 1514 aa13.07□□□□□ -0.32
TRPV1-202ENST00000399756 CDK13Q14004 1512 aaKnown RBP13.07□□□□□ -0.32
TRPV1-202ENST00000399756 KIF15Q9NS87 1388 aa13.07□□□□□ -0.32
TRPV1-202ENST00000399756 PLEKHG5O94827 1062 aa13.07□□□□□ -0.32
TRPV1-202ENST00000399756 DDRGK1Q96HY6 314 aa13.07□□□□□ -0.32
TRPV1-202ENST00000399756 NBPF1Q3BBV0 1214 aa13.07□□□□□ -0.32
TRPV1-202ENST00000399756 STK26Q9P289 416 aa13.07□□□□□ -0.32
TRPV1-202ENST00000399756 PRG4Q92954 1404 aaPredicted RBP13.07□□□□□ -0.32
TRPV1-202ENST00000399756 BIVM-ERCC5R4GMW8 1640 aa13.07□□□□□ -0.32
TRPV1-202ENST00000399756 CFAP53Q96M91 514 aa13.06□□□□□ -0.32
TRPV1-202ENST00000399756 CCDC144AA2RUR9 1427 aa13.06□□□□□ -0.32
TRPV1-202ENST00000399756 PTPRKQ15262 1439 aa13.06□□□□□ -0.32
TRPV1-202ENST00000399756 CDCA7LQ96GN5 454 aa13.06□□□□□ -0.32
TRPV1-202ENST00000399756 MORC1Q86VD1 984 aa13.05□□□□□ -0.32
TRPV1-202ENST00000399756 ANKRD50Q9ULJ7 1429 aa13.05□□□□□ -0.32
TRPV1-202ENST00000399756 FTSJ3Q8IY81 847 aaKnown RBP13.05□□□□□ -0.32
TRPV1-202ENST00000399756 AKNAQ7Z591 1439 aa13.05□□□□□ -0.32
TRPV1-202ENST00000399756 EFCAB5A4FU69 1503 aa13.05□□□□□ -0.32
TRPV1-202ENST00000399756 SLC4A3P48751 1232 aa13.04□□□□□ -0.32
TRPV1-202ENST00000399756 IPO9Q96P70 1041 aaKnown RBP13.04□□□□□ -0.32
TRPV1-202ENST00000399756 RRP1P56182 461 aaKnown RBP13.04□□□□□ -0.32
TRPV1-202ENST00000399756 PTPRGP23470 1445 aa13.04□□□□□ -0.32
TRPV1-202ENST00000399756 RRP7AQ9Y3A4 280 aaKnown RBP13.03□□□□□ -0.32
TRPV1-202ENST00000399756 CLUAP1Q96AJ1 413 aa13.03□□□□□ -0.32
TRPV1-202ENST00000399756 ABCA10Q8WWZ4 1543 aa13.03□□□□□ -0.32
TRPV1-202ENST00000399756 SPRYD3Q8NCJ5 442 aa13.03□□□□□ -0.32
TRPV1-202ENST00000399756 CRBNQ96SW2 442 aa13.02□□□□□ -0.32
TRPV1-202ENST00000399756 SPAG9O60271 1321 aaKnown RBP13.02□□□□□ -0.32
TRPV1-202ENST00000399756 TCERG1O14776 1098 aaKnown RBP13.02□□□□□ -0.33
TRPV1-202ENST00000399756 POGKQ9P215 609 aa13.02□□□□□ -0.33
TRPV1-202ENST00000399756 DNMBPQ6XZF7 1577 aa13.01□□□□□ -0.33
TRPV1-202ENST00000399756 GOLGA2Q08379 1002 aa13.01□□□□□ -0.33
TRPV1-202ENST00000399756 TRAK1Q9UPV9 953 aa13.01□□□□□ -0.33
TRPV1-202ENST00000399756 SRPK2P78362 688 aaKnown RBP13.01□□□□□ -0.33
TRPV1-202ENST00000399756 FANCIQ9NVI1 1328 aa13□□□□□ -0.33
TRPV1-202ENST00000399756 PDE4AP27815 886 aa13□□□□□ -0.33
TRPV1-202ENST00000399756 BCL2L13Q9BXK5 485 aa13□□□□□ -0.33
TRPV1-202ENST00000399756 U2AF1L5P0DN76 240 aaPredicted RBP12.99□□□□□ -0.33
TRPV1-202ENST00000399756 U2AF1Q01081 240 aaKnown RBP eCLIP12.99□□□□□ -0.33
TRPV1-202ENST00000399756 KANK1Q14678 1352 aa12.99□□□□□ -0.33
TRPV1-202ENST00000399756 MAPK8IP3Q9UPT6 1336 aa12.99□□□□□ -0.33
TRPV1-202ENST00000399756 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.99□□□□□ -0.33
TRPV1-202ENST00000399756 EHBP1L1Q8N3D4 1523 aa12.99□□□□□ -0.33
TRPV1-202ENST00000399756 GRIN2BQ13224 1484 aa12.98□□□□□ -0.33
TRPV1-202ENST00000399756 APAF1O14727 1248 aa12.98□□□□□ -0.33
TRPV1-202ENST00000399756 EPRSP07814 1512 aaKnown RBP12.98□□□□□ -0.33
TRPV1-202ENST00000399756 MLECQ14165 292 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms